RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 SYNDIG1LA6NDD5 238 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 TSTD3H0UI37 97 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 B4GALT2O60909 372 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 CERS1P27544 350 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 HTR2AP28223 471 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 TIA1P31483 386 aaKnown RBP eCLIP6.16□□□□□ -1.429e-10■■□□□ 14.2
CSDE1-204ENST00000369530 CCR8P51685 355 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 NRG3P56975 720 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 RPS15AP62244 130 aaKnown RBP6.16□□□□□ -1.42
CSDE1-204ENST00000369530 HAGHQ16775 308 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 CDC73Q6P1J9 531 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 ABHD17CQ6PCB6 329 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 CLEC2AQ6UVW9 174 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 Q6ZTK2 550 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 PPP1R3BQ86XI6 285 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 LRRC18Q8N456 261 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 KCNRGQ8N5I3 272 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 C16orf52Q8NHV5 167 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 RFKQ969G6 155 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 FAM210BQ96KR6 192 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 ZFYVE21Q9BQ24 234 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 TLNRD1Q9H1K6 362 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 CHST8Q9H2A9 424 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 SLC6A13Q9NSD5 602 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 FBXW2Q9UKT8 454 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 GSTK1Q9Y2Q3 226 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 EPG5Q9HCE0 2579 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 TANC2Q9HCD6 1990 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 IGLV3-32A0A0A0MS00 114 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 POM121CA8CG34 1229 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 GABRR3A8MPY1 467 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 IFNA17P01571 189 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 IL3P08700 152 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 ZNF763Q0D2J5 394 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 ZNF791Q3KP31 576 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-204ENST00000369530 ARHGAP40Q5TG30 622 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 FBXW9Q5XUX1 488 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 TNFAIP8L2Q6P589 184 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-204ENST00000369530 DNM1P46Q6ZS02 220 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 SLC29A4Q7RTT9 530 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 ZCCHC10Q8TBK6 192 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 RELTQ969Z4 430 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 BOD1Q96IK1 185 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 MRGPRX4Q96LA9 322 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 LMF1Q96S06 567 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 CACNG6Q9BXT2 260 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 OR51B6Q9H340 312 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 UBQLN3Q9H347 655 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 SEC61A2Q9H9S3 476 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 ADAM29Q9UKF5 820 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 TMED3Q9Y3Q3 217 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 CNTRLQ7Z7A1 2325 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 RIF1Q5UIP0 2472 aaKnown RBP6.16□□□□□ -1.42
CSDE1-204ENST00000369530 TMEM72A0PK05 275 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 PLPP1O14494 284 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 TXNL1O43396 289 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 ERI3O43414 337 aaKnown RBP6.16□□□□□ -1.42
CSDE1-204ENST00000369530 OIP5O43482 229 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 OR2T1O43869 369 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 SCRG1O75711 98 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 TBXA2RP21731 343 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 INPP1P49441 399 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 LSM11P83369 360 aaKnown RBP eCLIP6.16□□□□□ -1.42
CSDE1-204ENST00000369530 FUT7Q11130 342 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 C1DQ13901 141 aaKnown RBP6.16□□□□□ -1.42
CSDE1-204ENST00000369530 TMEM35AQ53FP2 167 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 C22orf42Q6IC83 251 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 CFAP161Q6P656 301 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 ZNF551Q7Z340 670 aaPredicted RBP6.16□□□□□ -1.42
CSDE1-204ENST00000369530 OR4F15Q8NGB8 312 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 OR10A7Q8NGE5 316 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 OR52J3Q8NH60 311 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 HPSE2Q8WWQ2 592 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 HAS2Q92819 552 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 RRNAD1Q96FB5 475 aaKnown RBP6.16□□□□□ -1.42
CSDE1-204ENST00000369530 KCNC2Q96PR1 638 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 TAAR6Q96RI8 345 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 SLC35A5Q9BS91 424 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 VN1R1Q9GZP7 353 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 BRF2Q9HAW0 419 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 GOLT1BQ9Y3E0 138 aa6.16□□□□□ -1.42
CSDE1-204ENST00000369530 ELOA3CA0A087WX78 387 aaPredicted RBP6.15□□□□□ -1.42
CSDE1-204ENST00000369530 IRGMA1A4Y4 181 aa6.15□□□□□ -1.42
CSDE1-204ENST00000369530 OGG1O15527 345 aa6.15□□□□□ -1.42
CSDE1-204ENST00000369530 F10P00742 488 aa6.15□□□□□ -1.42
CSDE1-204ENST00000369530 CD8AP01732 235 aa6.15□□□□□ -1.42
CSDE1-204ENST00000369530 OPN1MWP04001 364 aa6.15□□□□□ -1.42
CSDE1-204ENST00000369530 ZGLP1P0C6A0 271 aa6.15□□□□□ -1.42
CSDE1-204ENST00000369530 OPN1MW2P0DN77 364 aa6.15□□□□□ -1.42
CSDE1-204ENST00000369530 OPN1MW3P0DN78 364 aa6.15□□□□□ -1.42
CSDE1-204ENST00000369530 SLC25A4P12235 298 aa6.15□□□□□ -1.42
CSDE1-204ENST00000369530 MC3RP41968 323 aa6.15□□□□□ -1.42
CSDE1-204ENST00000369530 CDC42P60953 191 aa6.15□□□□□ -1.42
CSDE1-204ENST00000369530 RPS26P62854 115 aaKnown RBP6.15□□□□□ -1.42
CSDE1-204ENST00000369530 MLC1Q15049 377 aa6.15□□□□□ -1.42
CSDE1-204ENST00000369530 TESK1Q15569 626 aa6.15□□□□□ -1.42
CSDE1-204ENST00000369530 OR8G1Q15617 311 aa6.15□□□□□ -1.42
CSDE1-204ENST00000369530 ZNF630Q2M218 657 aaPredicted RBP6.15□□□□□ -1.42
CSDE1-204ENST00000369530 NKAPLQ5M9Q1 402 aa6.15□□□□□ -1.42
CSDE1-204ENST00000369530 HBMQ6B0K9 141 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms