RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 ST7LQ8TDW4 575 aa12.52□□□□□ -0.41
USF1-202ENST00000368020 RNF133Q8WVZ7 376 aa12.52□□□□□ -0.41
USF1-202ENST00000368020 SLC25A44Q96H78 314 aaPredicted RBP12.52□□□□□ -0.41
USF1-202ENST00000368020 OXGR1Q96P68 337 aa12.52□□□□□ -0.41
USF1-202ENST00000368020 MESP1Q9BRJ9 268 aa12.52□□□□□ -0.41
USF1-202ENST00000368020 B3GNT4Q9C0J1 378 aa12.52□□□□□ -0.41
USF1-202ENST00000368020 MED28Q9H204 178 aa12.52□□□□□ -0.41
USF1-202ENST00000368020 MOB1AQ9H8S9 216 aa12.52□□□□□ -0.41
USF1-202ENST00000368020 PTTG3PQ9NZH4 202 aa12.52□□□□□ -0.41
USF1-202ENST00000368020 ING1Q9UK53 422 aaPredicted RBP12.52□□□□□ -0.41
USF1-202ENST00000368020 GTF2A1LQ9UNN4 478 aa12.52□□□□□ -0.41
USF1-202ENST00000368020 LOXL2Q9Y4K0 774 aa12.52□□□□□ -0.41
USF1-202ENST00000368020 LOC100289279A0A1B0GTE1 492 aa12.51□□□□□ -0.41
USF1-202ENST00000368020 SRSF10O75494 262 aaKnown RBP12.51□□□□□ -0.41
USF1-202ENST00000368020 UMODP07911 640 aa12.51□□□□□ -0.41
USF1-202ENST00000368020 H2BFMP0C1H6 154 aa12.51□□□□□ -0.41
USF1-202ENST00000368020 ICAM2P13598 275 aa12.51□□□□□ -0.41
USF1-202ENST00000368020 CDK2P24941 298 aa12.51□□□□□ -0.41
USF1-202ENST00000368020 LAP3P28838 519 aa12.51□□□□□ -0.41
USF1-202ENST00000368020 PTH2RP49190 550 aa12.51□□□□□ -0.41
USF1-202ENST00000368020 SRP9P49458 86 aaKnown RBP12.51□□□□□ -0.41
USF1-202ENST00000368020 CDK10Q15131 360 aa12.51□□□□□ -0.41
USF1-202ENST00000368020 CD276Q5ZPR3 534 aa12.51□□□□□ -0.41
USF1-202ENST00000368020 ANKRD16Q6P6B7 361 aa12.51□□□□□ -0.41
USF1-202ENST00000368020 KLHL24Q6TFL4 600 aa12.51□□□□□ -0.41
USF1-202ENST00000368020 GLCCI1Q86VQ1 547 aa12.51□□□□□ -0.41
USF1-202ENST00000368020 ARMC10Q8N2F6 343 aa12.51□□□□□ -0.41
USF1-202ENST00000368020 GTPBP8Q8N3Z3 284 aaPredicted RBP12.51□□□□□ -0.41
USF1-202ENST00000368020 DTX3Q8N9I9 347 aa12.51□□□□□ -0.41
USF1-202ENST00000368020 OR6X1Q8NH79 312 aa12.51□□□□□ -0.41
USF1-202ENST00000368020 FOXRED1Q96CU9 486 aaPredicted RBP12.51□□□□□ -0.41
USF1-202ENST00000368020 ORAI1Q96D31 301 aa12.51□□□□□ -0.41
USF1-202ENST00000368020 TAAR9Q96RI9 348 aa12.51□□□□□ -0.41
USF1-202ENST00000368020 DDA1Q9BW61 102 aa12.51□□□□□ -0.41
USF1-202ENST00000368020 ANGPTL4Q9BY76 406 aa12.51□□□□□ -0.41
USF1-202ENST00000368020 MRPL13Q9BYD1 178 aaKnown RBP12.51□□□□□ -0.41
USF1-202ENST00000368020 SLC39A1Q9NY26 324 aa12.51□□□□□ -0.41
USF1-202ENST00000368020 B3GAT1Q9P2W7 334 aa12.51□□□□□ -0.41
USF1-202ENST00000368020 SPEGQ15772 3267 aa12.51□□□□□ -0.41
USF1-202ENST00000368020 A0A0A6YYH2 397 aa12.51□□□□□ -0.41
USF1-202ENST00000368020 NSG1A0A0A6YYJ2 146 aa12.51□□□□□ -0.41
USF1-202ENST00000368020 A0A1B0GTH9 108 aa12.51□□□□□ -0.41
USF1-202ENST00000368020 A6NJ64 397 aa12.51□□□□□ -0.41
USF1-202ENST00000368020 AGRPO00253 132 aa12.51□□□□□ -0.41
USF1-202ENST00000368020 EIF1BO60739 113 aaKnown RBP12.51□□□□□ -0.41
USF1-202ENST00000368020 KLF7O75840 302 aaPredicted RBP12.51□□□□□ -0.41
USF1-202ENST00000368020 PMS2P2O95744 297 aa12.51□□□□□ -0.41
USF1-202ENST00000368020 H2AFB2P0C5Z0 115 aa12.51□□□□□ -0.41
USF1-202ENST00000368020 ZNF17P17021 662 aa12.51□□□□□ -0.41
USF1-202ENST00000368020 ZNF28P17035 718 aa12.51□□□□□ -0.41
USF1-202ENST00000368020 GIFP27352 417 aa12.51□□□□□ -0.41
USF1-202ENST00000368020 BCL2A1Q16548 175 aa12.51□□□□□ -0.41
USF1-202ENST00000368020 DCAF12Q5T6F0 453 aa12.51□□□□□ -0.41
USF1-202ENST00000368020 BCL2L15Q5TBC7 163 aa12.51□□□□□ -0.41
USF1-202ENST00000368020 OLFML2AQ68BL7 652 aa12.51□□□□□ -0.41
USF1-202ENST00000368020 TMEM225Q6GV28 225 aa12.51□□□□□ -0.41
USF1-202ENST00000368020 DNM1P46Q6ZS02 220 aa12.51□□□□□ -0.41
USF1-202ENST00000368020 ESPNLQ6ZVH7 1005 aa12.51□□□□□ -0.41
USF1-202ENST00000368020 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.51□□□□□ -0.41
USF1-202ENST00000368020 KDM8Q8N371 416 aa12.51□□□□□ -0.41
USF1-202ENST00000368020 WDSUB1Q8N9V3 476 aa12.51□□□□□ -0.41
USF1-202ENST00000368020 OR51A4Q8NGJ6 313 aa12.51□□□□□ -0.41
USF1-202ENST00000368020 ASB5Q8WWX0 329 aa12.51□□□□□ -0.41
USF1-202ENST00000368020 OR5B2Q96R09 309 aa12.51□□□□□ -0.41
USF1-202ENST00000368020 NPAS1Q99742 590 aa12.51□□□□□ -0.41
USF1-202ENST00000368020 C1orf198Q9H425 327 aa12.51□□□□□ -0.41
USF1-202ENST00000368020 SLA2Q9H6Q3 261 aa12.51□□□□□ -0.41
USF1-202ENST00000368020 MCUBQ9NWR8 336 aa12.51□□□□□ -0.41
USF1-202ENST00000368020 MED29Q9NX70 200 aa12.51□□□□□ -0.41
USF1-202ENST00000368020 OR52A1Q9UKL2 312 aa12.51□□□□□ -0.41
USF1-202ENST00000368020 ALPK2Q86TB3 2170 aa12.5□□□□□ -0.41
USF1-202ENST00000368020 CACNA1CQ13936 2221 aa12.5□□□□□ -0.41
USF1-202ENST00000368020 TMEM269A0A1B0GVZ9 245 aa12.5□□□□□ -0.41
USF1-202ENST00000368020 ANKRD20A5PA0PJZ0 165 aa12.5□□□□□ -0.41
USF1-202ENST00000368020 AQP7P3A6NL99 342 aa12.5□□□□□ -0.41
USF1-202ENST00000368020 EFNA2O43921 213 aa12.5□□□□□ -0.41
USF1-202ENST00000368020 GLSO94925 669 aaPredicted RBP12.5□□□□□ -0.41
USF1-202ENST00000368020 VAMP5O95183 116 aa12.5□□□□□ -0.41
USF1-202ENST00000368020 PNPP00491 289 aa12.5□□□□□ -0.41
USF1-202ENST00000368020 JMJD7P0C870 316 aa12.5□□□□□ -0.41
USF1-202ENST00000368020 CD37P11049 281 aa12.5□□□□□ -0.41
USF1-202ENST00000368020 ZNF43P17038 809 aa12.5□□□□□ -0.41
USF1-202ENST00000368020 MAGEB1P43366 347 aa12.5□□□□□ -0.41
USF1-202ENST00000368020 DNASE1L1P49184 302 aa12.5□□□□□ -0.41
USF1-202ENST00000368020 DSCR4P56555 118 aaPredicted RBP12.5□□□□□ -0.41
USF1-202ENST00000368020 CLDN12P56749 244 aa12.5□□□□□ -0.41
USF1-202ENST00000368020 TAS2R20P59543 309 aa12.5□□□□□ -0.41
USF1-202ENST00000368020 NHLRC1Q6VVB1 395 aa12.5□□□□□ -0.41
USF1-202ENST00000368020 OR6M1Q8NGM8 313 aa12.5□□□□□ -0.41
USF1-202ENST00000368020 OR13C3Q8NGS6 347 aa12.5□□□□□ -0.41
USF1-202ENST00000368020 OR10AC1Q8NH08 325 aa12.5□□□□□ -0.41
USF1-202ENST00000368020 OR52I2Q8NH67 350 aa12.5□□□□□ -0.41
USF1-202ENST00000368020 PAQR8Q8TEZ7 354 aa12.5□□□□□ -0.41
USF1-202ENST00000368020 RNF170Q96K19 258 aa12.5□□□□□ -0.41
USF1-202ENST00000368020 DMRTB1Q96MA1 342 aa12.5□□□□□ -0.41
USF1-202ENST00000368020 FYTTD1Q96QD9 318 aaKnown RBP12.5□□□□□ -0.41
USF1-202ENST00000368020 TP63Q9H3D4 680 aaPredicted RBP12.5□□□□□ -0.41
USF1-202ENST00000368020 GHITMQ9H3K2 345 aa12.5□□□□□ -0.41
USF1-202ENST00000368020 AUNIPQ9H7T9 357 aa12.5□□□□□ -0.41
USF1-202ENST00000368020 CYB5R1Q9UHQ9 305 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms