RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 CYB5BO43169 146 aa10.51□□□□□ -0.73
SYNE1-204ENST00000367248 ATP6V1G1O75348 118 aa10.51□□□□□ -0.73
SYNE1-204ENST00000367248 YIF1AO95070 293 aa10.51□□□□□ -0.73
SYNE1-204ENST00000367248 NR4A2P43354 598 aa10.51□□□□□ -0.73
SYNE1-204ENST00000367248 F2RL1P55085 397 aa10.51□□□□□ -0.73
SYNE1-204ENST00000367248 SLC35A2P78381 396 aa10.51□□□□□ -0.73
SYNE1-204ENST00000367248 INSM1Q01101 510 aaPredicted RBP10.51□□□□□ -0.73
SYNE1-204ENST00000367248 EIF4EBP2Q13542 120 aaPredicted RBP10.51□□□□□ -0.73
SYNE1-204ENST00000367248 RAB35Q15286 201 aa10.51□□□□□ -0.73
SYNE1-204ENST00000367248 OR4C3Q8NH37 302 aa10.51□□□□□ -0.73
SYNE1-204ENST00000367248 NOX3Q9HBY0 568 aa10.51□□□□□ -0.73
SYNE1-204ENST00000367248 B3GAT1Q9P2W7 334 aa10.51□□□□□ -0.73
SYNE1-204ENST00000367248 CLEC2LP0C7M8 214 aa10.5□□□□□ -0.73
SYNE1-204ENST00000367248 TAS2R46P59540 309 aa10.5□□□□□ -0.73
SYNE1-204ENST00000367248 FJX1Q86VR8 437 aa10.5□□□□□ -0.73
SYNE1-204ENST00000367248 PARP16Q8N5Y8 322 aa10.5□□□□□ -0.73
SYNE1-204ENST00000367248 NANOGP1Q8N7R0 232 aa10.5□□□□□ -0.73
SYNE1-204ENST00000367248 PDCD1LG2Q9BQ51 273 aa10.5□□□□□ -0.73
SYNE1-204ENST00000367248 SPINT1O43278 529 aa10.5□□□□□ -0.73
SYNE1-204ENST00000367248 WNT3P56703 355 aa10.5□□□□□ -0.73
SYNE1-204ENST00000367248 ZIC1Q15915 447 aa10.5□□□□□ -0.73
SYNE1-204ENST00000367248 THEM4Q5T1C6 240 aa10.5□□□□□ -0.73
SYNE1-204ENST00000367248 WDR88Q6ZMY6 472 aa10.5□□□□□ -0.73
SYNE1-204ENST00000367248 MSRB3Q8IXL7 192 aa10.5□□□□□ -0.73
SYNE1-204ENST00000367248 KLHDC8BQ8IXV7 354 aa10.5□□□□□ -0.73
SYNE1-204ENST00000367248 SYS1Q8N2H4 156 aa10.5□□□□□ -0.73
SYNE1-204ENST00000367248 SLCO4A1Q96BD0 722 aa10.5□□□□□ -0.73
SYNE1-204ENST00000367248 SAT2Q96F10 170 aaPredicted RBP10.5□□□□□ -0.73
SYNE1-204ENST00000367248 FAM173AQ9BQD7 235 aa10.5□□□□□ -0.73
SYNE1-204ENST00000367248 SLC6A13Q9NSD5 602 aa10.5□□□□□ -0.73
SYNE1-204ENST00000367248 PLCXD1Q9NUJ7 323 aa10.5□□□□□ -0.73
SYNE1-204ENST00000367248 MCM3APO60318 1980 aa10.5□□□□□ -0.73
SYNE1-204ENST00000367248 COL5A3P25940 1745 aaPredicted RBP10.5□□□□□ -0.73
SYNE1-204ENST00000367248 SLC2A10O95528 541 aa10.5□□□□□ -0.73
SYNE1-204ENST00000367248 OR8U9P0C7N5 309 aa10.5□□□□□ -0.73
SYNE1-204ENST00000367248 SSPNQ14714 243 aa10.5□□□□□ -0.73
SYNE1-204ENST00000367248 FAM219BQ5XKK7 198 aa10.5□□□□□ -0.73
SYNE1-204ENST00000367248 USP51Q70EK9 711 aa10.5□□□□□ -0.73
SYNE1-204ENST00000367248 SEMA6DQ8NFY4 1073 aa10.5□□□□□ -0.73
SYNE1-204ENST00000367248 PCOLCE2Q9UKZ9 415 aa10.5□□□□□ -0.73
SYNE1-204ENST00000367248 PRSS37A4D1T9 235 aa10.5□□□□□ -0.73
SYNE1-204ENST00000367248 ARRDC5A6NEK1 342 aa10.5□□□□□ -0.73
SYNE1-204ENST00000367248 PPIHO43447 177 aaKnown RBP10.5□□□□□ -0.73
SYNE1-204ENST00000367248 UBL3O95164 117 aa10.5□□□□□ -0.73
SYNE1-204ENST00000367248 IFNA4P05014 189 aa10.5□□□□□ -0.73
SYNE1-204ENST00000367248 CLEC3BP05452 202 aa10.5□□□□□ -0.73
SYNE1-204ENST00000367248 CALHM3Q86XJ0 350 aa10.5□□□□□ -0.73
SYNE1-204ENST00000367248 FAM3DQ96BQ1 224 aa10.5□□□□□ -0.73
SYNE1-204ENST00000367248 ZNF385DQ9H6B1 395 aa10.5□□□□□ -0.73
SYNE1-204ENST00000367248 GPATCH2Q9NW75 528 aa10.5□□□□□ -0.73
SYNE1-204ENST00000367248 MT-ND4P03905 459 aa10.5□□□□□ -0.73
SYNE1-204ENST00000367248 GIFP27352 417 aa10.5□□□□□ -0.73
SYNE1-204ENST00000367248 FOXL2P58012 376 aa10.5□□□□□ -0.73
SYNE1-204ENST00000367248 CATR1Q13166 79 aa10.5□□□□□ -0.73
SYNE1-204ENST00000367248 GLIPR1L1Q6UWM5 242 aa10.5□□□□□ -0.73
SYNE1-204ENST00000367248 CCDC71Q8IV32 467 aaPredicted RBP10.5□□□□□ -0.73
SYNE1-204ENST00000367248 TSSK2Q96PF2 358 aa10.5□□□□□ -0.73
SYNE1-204ENST00000367248 OR51J1Q9H342 316 aa10.5□□□□□ -0.73
SYNE1-204ENST00000367248 TNS1Q9HBL0 1735 aaKnown RBP10.5□□□□□ -0.73
SYNE1-204ENST00000367248 PRKACAP17612 351 aa10.5□□□□□ -0.73
SYNE1-204ENST00000367248 ZNF616Q08AN1 781 aa10.5□□□□□ -0.73
SYNE1-204ENST00000367248 GLYATL3Q5SZD4 288 aa10.5□□□□□ -0.73
SYNE1-204ENST00000367248 TRMT61AQ96FX7 289 aaKnown RBP10.5□□□□□ -0.73
SYNE1-204ENST00000367248 ZMAT3Q9HA38 289 aaKnown RBP10.5□□□□□ -0.73
SYNE1-204ENST00000367248 LIN7BQ9HAP6 207 aa10.5□□□□□ -0.73
SYNE1-204ENST00000367248 LINC01387J3KSC0 135 aa10.49□□□□□ -0.73
SYNE1-204ENST00000367248 IFNA2P01563 188 aa10.49□□□□□ -0.73
SYNE1-204ENST00000367248 SNCAP37840 140 aa10.49□□□□□ -0.73
SYNE1-204ENST00000367248 HCCSP53701 268 aa10.49□□□□□ -0.73
SYNE1-204ENST00000367248 DSCR4P56555 118 aaPredicted RBP10.49□□□□□ -0.73
SYNE1-204ENST00000367248 TNK1Q13470 666 aa10.49□□□□□ -0.73
SYNE1-204ENST00000367248 ACTBL2Q562R1 376 aa10.49□□□□□ -0.73
SYNE1-204ENST00000367248 FAHD1Q6P587 224 aa10.49□□□□□ -0.73
SYNE1-204ENST00000367248 Q6ZTK2 550 aa10.49□□□□□ -0.73
SYNE1-204ENST00000367248 OSGIN2Q9Y236 505 aa10.49□□□□□ -0.73
SYNE1-204ENST00000367248 ZC3H12DA2A288 527 aaKnown RBP10.49□□□□□ -0.73
SYNE1-204ENST00000367248 F5H5P2 479 aa10.49□□□□□ -0.73
SYNE1-204ENST00000367248 IL13RA1P78552 427 aa10.49□□□□□ -0.73
SYNE1-204ENST00000367248 PAN3Q58A45 887 aaKnown RBP10.49□□□□□ -0.73
SYNE1-204ENST00000367248 UBE2NLQ5JXB2 153 aa10.49□□□□□ -0.73
SYNE1-204ENST00000367248 ANKRD37Q7Z713 158 aa10.49□□□□□ -0.73
SYNE1-204ENST00000367248 SYT9Q86SS6 491 aa10.49□□□□□ -0.73
SYNE1-204ENST00000367248 ERVMER34-1Q9H9K5 563 aa10.49□□□□□ -0.73
SYNE1-204ENST00000367248 KCNJ16Q9NPI9 418 aa10.49□□□□□ -0.73
SYNE1-204ENST00000367248 M0R135 149 aa10.49□□□□□ -0.73
SYNE1-204ENST00000367248 EIF2S3P41091 472 aaKnown RBP10.49□□□□□ -0.73
SYNE1-204ENST00000367248 AGERQ15109 404 aa10.49□□□□□ -0.73
SYNE1-204ENST00000367248 CLPPQ16740 277 aaPredicted RBP10.49□□□□□ -0.73
SYNE1-204ENST00000367248 ZNF799Q96GE5 643 aa10.49□□□□□ -0.73
SYNE1-204ENST00000367248 ARHGDIGQ99819 225 aa10.49□□□□□ -0.73
SYNE1-204ENST00000367248 DPCDQ9BVM2 203 aaPredicted RBP10.49□□□□□ -0.73
SYNE1-204ENST00000367248 NUP205Q92621 2012 aa10.49□□□□□ -0.73
SYNE1-204ENST00000367248 LYZL6O75951 148 aa10.49□□□□□ -0.73
SYNE1-204ENST00000367248 IGHV4-34P06331 123 aa10.49□□□□□ -0.73
SYNE1-204ENST00000367248 ABCD3P28288 659 aa10.49□□□□□ -0.73
SYNE1-204ENST00000367248 NKX6-1P78426 367 aaPredicted RBP10.49□□□□□ -0.73
SYNE1-204ENST00000367248 SFRP5Q5T4F7 317 aa10.49□□□□□ -0.73
SYNE1-204ENST00000367248 ADGRE4PQ86SQ3 457 aa10.49□□□□□ -0.73
SYNE1-204ENST00000367248 PLPP7Q8NBV4 271 aa10.49□□□□□ -0.73
SYNE1-204ENST00000367248 MBOAT4Q96T53 435 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms