RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 PROX1Q92786 737 aa6.81□□□□□ -1.32
YBX3-204ENST00000366290 GMPPAQ96IJ6 420 aaPredicted RBP6.81□□□□□ -1.32
YBX3-204ENST00000366290 TPD52L3Q96J77 140 aa6.81□□□□□ -1.32
YBX3-204ENST00000366290 C7orf34Q96L11 122 aa6.81□□□□□ -1.32
YBX3-204ENST00000366290 DACH2Q96NX9 599 aa6.81□□□□□ -1.32
YBX3-204ENST00000366290 ZNF559Q9BR84 538 aa6.81□□□□□ -1.32
YBX3-204ENST00000366290 ARMC7Q9H6L4 198 aa6.81□□□□□ -1.32
YBX3-204ENST00000366290 COQ10BQ9H8M1 238 aa6.81□□□□□ -1.32
YBX3-204ENST00000366290 CACYBPQ9HB71 228 aaKnown RBP6.81□□□□□ -1.32
YBX3-204ENST00000366290 CTPS2Q9NRF8 586 aa6.81□□□□□ -1.32
YBX3-204ENST00000366290 CISD1Q9NZ45 108 aaKnown RBP6.81□□□□□ -1.32
YBX3-204ENST00000366290 OSGIN1Q9UJX0 560 aa6.81□□□□□ -1.32
YBX3-204ENST00000366290 SH3GLB1Q9Y371 365 aa6.81□□□□□ -1.32
YBX3-204ENST00000366290 V9GYQ6 96 aa6.81□□□□□ -1.32
YBX3-204ENST00000366290 ARID1AO14497 2285 aa6.8□□□□□ -1.32
YBX3-204ENST00000366290 ACANP16112 2415 aa6.8□□□□□ -1.32
YBX3-204ENST00000366290 CADP27708 2225 aa6.8□□□□□ -1.32
YBX3-204ENST00000366290 IGKV1D-42A0A075B6H8 117 aa6.8□□□□□ -1.32
YBX3-204ENST00000366290 TCRBV3S1A0A5B6 114 aa6.8□□□□□ -1.32
YBX3-204ENST00000366290 TMEM72A0PK05 275 aa6.8□□□□□ -1.32
YBX3-204ENST00000366290 TUBAL3A6NHL2 446 aa6.8□□□□□ -1.32
YBX3-204ENST00000366290 EEF1E1-BLOC1S5C9J1V9 151 aa6.8□□□□□ -1.32
YBX3-204ENST00000366290 EEF1E1O43324 174 aaKnown RBP6.8□□□□□ -1.32
YBX3-204ENST00000366290 NPIPB7O75200 414 aa6.8□□□□□ -1.32
YBX3-204ENST00000366290 FKBP2P26885 142 aaKnown RBP6.8□□□□□ -1.32
YBX3-204ENST00000366290 CHATP28329 748 aa6.8□□□□□ -1.32
YBX3-204ENST00000366290 ENTPD1P49961 510 aa6.8□□□□□ -1.32
YBX3-204ENST00000366290 CARD18P57730 90 aa6.8□□□□□ -1.32
YBX3-204ENST00000366290 VLDLRP98155 873 aa6.8□□□□□ -1.32
YBX3-204ENST00000366290 EGR4Q05215 589 aa6.8□□□□□ -1.32
YBX3-204ENST00000366290 MERTKQ12866 999 aa6.8□□□□□ -1.32
YBX3-204ENST00000366290 MYBPHQ13203 477 aa6.8□□□□□ -1.32
YBX3-204ENST00000366290 ZNF239Q16600 458 aaKnown RBP6.8□□□□□ -1.32
YBX3-204ENST00000366290 ZSCAN26Q16670 478 aa6.8□□□□□ -1.32
YBX3-204ENST00000366290 KRTAP21-3Q3LHN1 58 aa6.8□□□□□ -1.32
YBX3-204ENST00000366290 IFI44LQ53G44 452 aa6.8□□□□□ -1.32
YBX3-204ENST00000366290 CXorf66Q5JRM2 361 aaPredicted RBP6.8□□□□□ -1.32
YBX3-204ENST00000366290 PDSS1Q5T2R2 415 aa6.8□□□□□ -1.32
YBX3-204ENST00000366290 HBMQ6B0K9 141 aa6.8□□□□□ -1.32
YBX3-204ENST00000366290 HIST2H2BDQ6DRA6 164 aa6.8□□□□□ -1.32
YBX3-204ENST00000366290 WBP2NLQ6ICG8 309 aa6.8□□□□□ -1.32
YBX3-204ENST00000366290 WDR88Q6ZMY6 472 aa6.8□□□□□ -1.32
YBX3-204ENST00000366290 ZNF367Q7RTV3 350 aa6.8□□□□□ -1.32
YBX3-204ENST00000366290 P4HA3Q7Z4N8 544 aa6.8□□□□□ -1.32
YBX3-204ENST00000366290 DHFR2Q86XF0 187 aa6.8□□□□□ -1.32
YBX3-204ENST00000366290 CADM2Q8N3J6 435 aa6.8□□□□□ -1.32
YBX3-204ENST00000366290 OR6K3Q8NGY3 331 aa6.8□□□□□ -1.32
YBX3-204ENST00000366290 ZNF563Q8TA94 476 aa6.8□□□□□ -1.32
YBX3-204ENST00000366290 RNF128Q8TEB7 428 aa6.8□□□□□ -1.32
YBX3-204ENST00000366290 GEMIN6Q8WXD5 167 aaKnown RBP6.8□□□□□ -1.32
YBX3-204ENST00000366290 TMEM234Q8WY98 164 aa6.8□□□□□ -1.32
YBX3-204ENST00000366290 LZICQ8WZA0 190 aa6.8□□□□□ -1.32
YBX3-204ENST00000366290 CPNE4Q96A23 557 aaPredicted RBP6.8□□□□□ -1.32
YBX3-204ENST00000366290 MCUR1Q96AQ8 359 aa6.8□□□□□ -1.32
YBX3-204ENST00000366290 URB1-AS1Q96HZ7 61 aa6.8□□□□□ -1.32
YBX3-204ENST00000366290 PYURFQ96I23 114 aa6.8□□□□□ -1.32
YBX3-204ENST00000366290 MCHR1Q99705 422 aa6.8□□□□□ -1.32
YBX3-204ENST00000366290 PRSS27Q9BQR3 290 aa6.8□□□□□ -1.32
YBX3-204ENST00000366290 RBM24Q9BX46 236 aaKnown RBP6.8□□□□□ -1.32
YBX3-204ENST00000366290 MMADHCQ9H3L0 296 aaPredicted RBP6.8□□□□□ -1.32
YBX3-204ENST00000366290 TMEM185BQ9H7F4 350 aa6.8□□□□□ -1.32
YBX3-204ENST00000366290 EVA1AQ9H8M9 152 aa6.8□□□□□ -1.32
YBX3-204ENST00000366290 TIGARQ9NQ88 270 aa6.8□□□□□ -1.32
YBX3-204ENST00000366290 PLSCR4Q9NRQ2 329 aa6.8□□□□□ -1.32
YBX3-204ENST00000366290 MAN2C1Q9NTJ4 1040 aa6.8□□□□□ -1.32
YBX3-204ENST00000366290 ADPRHL2Q9NX46 363 aa6.8□□□□□ -1.32
YBX3-204ENST00000366290 KLHL28Q9NXS3 571 aa6.8□□□□□ -1.32
YBX3-204ENST00000366290 PLCE1Q9P212 2302 aa6.8□□□□□ -1.32
YBX3-204ENST00000366290 RPS6KA6Q9UK32 745 aa6.8□□□□□ -1.32
YBX3-204ENST00000366290 MCTS1Q9ULC4 181 aaKnown RBP6.8□□□□□ -1.32
YBX3-204ENST00000366290 SAMD4AQ9UPU9 718 aaKnown RBP6.8□□□□□ -1.32
YBX3-204ENST00000366290 SLC9A8Q9Y2E8 581 aa6.8□□□□□ -1.32
YBX3-204ENST00000366290 TMED7-TICAM2A0A0A6YYA0 188 aa6.79□□□□□ -1.32
YBX3-204ENST00000366290 CPSF4LA6NMK7 179 aaKnown RBP6.79□□□□□ -1.32
YBX3-204ENST00000366290 TNFSF11O14788 317 aa6.79□□□□□ -1.32
YBX3-204ENST00000366290 CXCL13O43927 109 aa6.79□□□□□ -1.32
YBX3-204ENST00000366290 OPN1LWP04000 364 aa6.79□□□□□ -1.32
YBX3-204ENST00000366290 PSG1P11464 419 aa6.79□□□□□ -1.32
YBX3-204ENST00000366290 KLK2P20151 261 aa6.79□□□□□ -1.32
YBX3-204ENST00000366290 CD79BP40259 229 aa6.79□□□□□ -1.32
YBX3-204ENST00000366290 APOBEC1P41238 236 aaKnown RBP6.79□□□□□ -1.32
YBX3-204ENST00000366290 MAGEA2P43356 314 aa6.79□□□□□ -1.32
YBX3-204ENST00000366290 YAP1P46937 504 aaKnown RBP6.79□□□□□ -1.32
YBX3-204ENST00000366290 CLK1P49759 484 aaKnown RBP6.79□□□□□ -1.32
YBX3-204ENST00000366290 ERFP50548 548 aa6.79□□□□□ -1.32
YBX3-204ENST00000366290 POLR2HP52434 150 aaKnown RBP6.79□□□□□ -1.32
YBX3-204ENST00000366290 FLOT2Q14254 428 aa6.79□□□□□ -1.32
YBX3-204ENST00000366290 SGCBQ16585 318 aa6.79□□□□□ -1.32
YBX3-204ENST00000366290 TMEM176BQ3YBM2 270 aaPredicted RBP6.79□□□□□ -1.32
YBX3-204ENST00000366290 C3orf33Q6P1S2 294 aa6.79□□□□□ -1.32
YBX3-204ENST00000366290 TMEM154Q6P9G4 183 aa6.79□□□□□ -1.32
YBX3-204ENST00000366290 ZNF613Q6PF04 617 aa6.79□□□□□ -1.32
YBX3-204ENST00000366290 LUZP2Q86TE4 346 aa6.79□□□□□ -1.32
YBX3-204ENST00000366290 RANBP3LQ86VV4 465 aaPredicted RBP6.79□□□□□ -1.32
YBX3-204ENST00000366290 AQP12AQ8IXF9 295 aa6.79□□□□□ -1.32
YBX3-204ENST00000366290 ADAMTS16Q8TE57 1224 aa6.79□□□□□ -1.32
YBX3-204ENST00000366290 SMPDL3BQ92485 455 aa6.79□□□□□ -1.32
YBX3-204ENST00000366290 OSTF1Q92882 214 aa6.79□□□□□ -1.32
YBX3-204ENST00000366290 SLC38A4Q969I6 547 aa6.79□□□□□ -1.32
YBX3-204ENST00000366290 ERGIC1Q969X5 290 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms