RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 ZSWIM8A7E2V4 1837 aa1.93□□□□□ -2.1
RNU4-28P-201ENST00000364739 IGLV1-36A0A0B4J1U3 117 aa1.92□□□□□ -2.1
RNU4-28P-201ENST00000364739 FAM47DPA6NHR8 397 aa1.92□□□□□ -2.1
RNU4-28P-201ENST00000364739 PCP4L1A6NKN8 68 aa1.92□□□□□ -2.1
RNU4-28P-201ENST00000364739 CD3GP09693 182 aa1.92□□□□□ -2.1
RNU4-28P-201ENST00000364739 DCKP27707 260 aa1.92□□□□□ -2.1
RNU4-28P-201ENST00000364739 CASP14P31944 242 aa1.92□□□□□ -2.1
RNU4-28P-201ENST00000364739 SSR1P43307 286 aaKnown RBP1.92□□□□□ -2.1
RNU4-28P-201ENST00000364739 TPMTP51580 245 aa1.92□□□□□ -2.1
RNU4-28P-201ENST00000364739 RBX1P62877 108 aa1.92□□□□□ -2.1
RNU4-28P-201ENST00000364739 KCNJ2P63252 427 aa1.92□□□□□ -2.1
RNU4-28P-201ENST00000364739 MRPS22P82650 360 aaKnown RBP1.92□□□□□ -2.1
RNU4-28P-201ENST00000364739 BAMBIQ13145 260 aa1.92□□□□□ -2.1
RNU4-28P-201ENST00000364739 MPV17L2Q567V2 206 aa1.92□□□□□ -2.1
RNU4-28P-201ENST00000364739 SNX20Q7Z614 316 aa1.92□□□□□ -2.1
RNU4-28P-201ENST00000364739 PDIK1LQ8N165 341 aa1.92□□□□□ -2.1
RNU4-28P-201ENST00000364739 TMEM256Q8N2U0 113 aa1.92□□□□□ -2.1
RNU4-28P-201ENST00000364739 OR52M1Q8NGK5 317 aa1.92□□□□□ -2.1
RNU4-28P-201ENST00000364739 NTAN1Q96AB6 310 aa1.92□□□□□ -2.1
RNU4-28P-201ENST00000364739 PKNOX2Q96KN3 472 aa1.92□□□□□ -2.1
RNU4-28P-201ENST00000364739 ANGPTL4Q9BY76 406 aa1.92□□□□□ -2.1
RNU4-28P-201ENST00000364739 EDA2RQ9HAV5 297 aa1.92□□□□□ -2.1
RNU4-28P-201ENST00000364739 ENOPH1Q9UHY7 261 aa1.92□□□□□ -2.1
RNU4-28P-201ENST00000364739 HYOU1Q9Y4L1 999 aa1.92□□□□□ -2.1
RNU4-28P-201ENST00000364739 DDX49Q9Y6V7 483 aaKnown RBP1.92□□□□□ -2.1
RNU4-28P-201ENST00000364739 ADGRL1O94910 1474 aa1.92□□□□□ -2.1
RNU4-28P-201ENST00000364739 CACNA1DQ01668 2161 aa1.92□□□□□ -2.1
RNU4-28P-201ENST00000364739 A0A1W2PNN7 141 aa1.91□□□□□ -2.1
RNU4-28P-201ENST00000364739 DNASE2O00115 360 aaPredicted RBP1.91□□□□□ -2.1
RNU4-28P-201ENST00000364739 REM1O75628 298 aa1.91□□□□□ -2.1
RNU4-28P-201ENST00000364739 H6PDO95479 791 aa1.91□□□□□ -2.1
RNU4-28P-201ENST00000364739 ZNF688P0C7X2 276 aa1.91□□□□□ -2.1
RNU4-28P-201ENST00000364739 IL1RNP18510 177 aa1.91□□□□□ -2.1
RNU4-28P-201ENST00000364739 LOXP28300 417 aaPredicted RBP1.91□□□□□ -2.1
RNU4-28P-201ENST00000364739 IFNA8P32881 189 aa1.91□□□□□ -2.1
RNU4-28P-201ENST00000364739 CDKN2DP55273 166 aa1.91□□□□□ -2.1
RNU4-28P-201ENST00000364739 TAS2R31P59538 309 aa1.91□□□□□ -2.1
RNU4-28P-201ENST00000364739 TGFBIQ15582 683 aa1.91□□□□□ -2.1
RNU4-28P-201ENST00000364739 C6orf226Q5I0X4 101 aa1.91□□□□□ -2.1
RNU4-28P-201ENST00000364739 OR2L3Q8NG85 312 aa1.91□□□□□ -2.1
RNU4-28P-201ENST00000364739 ZNF502Q8TBZ5 544 aa1.91□□□□□ -2.1
RNU4-28P-201ENST00000364739 ZCCHC13Q8WW36 166 aaKnown RBP1.91□□□□□ -2.1
RNU4-28P-201ENST00000364739 TSGA13Q96PP4 275 aa1.91□□□□□ -2.1
RNU4-28P-201ENST00000364739 CDX2Q99626 313 aaPredicted RBP1.91□□□□□ -2.1
RNU4-28P-201ENST00000364739 SGK2Q9HBY8 427 aa1.91□□□□□ -2.1
RNU4-28P-201ENST00000364739 C8orf17Q9NRJ1 99 aa1.91□□□□□ -2.1
RNU4-28P-201ENST00000364739 LSM7Q9UK45 103 aaKnown RBP1.91□□□□□ -2.1
RNU4-28P-201ENST00000364739 MAPK8IP3Q9UPT6 1336 aa1.91□□□□□ -2.1
RNU4-28P-201ENST00000364739 ZNF98A6NK75 572 aa1.9□□□□□ -2.11
RNU4-28P-201ENST00000364739 IGLV3-25P01717 112 aa1.9□□□□□ -2.11
RNU4-28P-201ENST00000364739 SERPIND1P05546 499 aa1.9□□□□□ -2.11
RNU4-28P-201ENST00000364739 CRYGBP07316 175 aa1.9□□□□□ -2.11
RNU4-28P-201ENST00000364739 GLRA2P23416 452 aa1.9□□□□□ -2.11
RNU4-28P-201ENST00000364739 KDELC1Q6UW63 502 aa1.9□□□□□ -2.11
RNU4-28P-201ENST00000364739 TMEM104Q8NE00 496 aa1.9□□□□□ -2.11
RNU4-28P-201ENST00000364739 OR8J1Q8NGP2 316 aa1.9□□□□□ -2.11
RNU4-28P-201ENST00000364739 OR5B3Q8NH48 314 aa1.9□□□□□ -2.11
RNU4-28P-201ENST00000364739 SLC7A13Q8TCU3 470 aa1.9□□□□□ -2.11
RNU4-28P-201ENST00000364739 LRRC29Q8WV35 223 aa1.9□□□□□ -2.11
RNU4-28P-201ENST00000364739 TVP23CQ96ET8 276 aa1.9□□□□□ -2.11
RNU4-28P-201ENST00000364739 SHANK2-AS3Q9BTD1 123 aa1.9□□□□□ -2.11
RNU4-28P-201ENST00000364739 TRMT112Q9UI30 125 aaKnown RBP1.9□□□□□ -2.11
RNU4-28P-201ENST00000364739 GOLT1BQ9Y3E0 138 aa1.9□□□□□ -2.11
RNU4-28P-201ENST00000364739 IGHV3OR16-8A0A075B7F1 116 aa1.89□□□□□ -2.11
RNU4-28P-201ENST00000364739 OR6C74A6NCV1 312 aa1.89□□□□□ -2.11
RNU4-28P-201ENST00000364739 OR52A4PA6NMU1 304 aa1.89□□□□□ -2.11
RNU4-28P-201ENST00000364739 BTNL10A8MVZ5 291 aa1.89□□□□□ -2.11
RNU4-28P-201ENST00000364739 RDH16O75452 317 aa1.89□□□□□ -2.11
RNU4-28P-201ENST00000364739 EEDO75530 441 aaKnown RBP1.89□□□□□ -2.11
RNU4-28P-201ENST00000364739 EIF4EP06730 217 aaKnown RBP1.89□□□□□ -2.11
RNU4-28P-201ENST00000364739 ME2P23368 584 aa1.89□□□□□ -2.11
RNU4-28P-201ENST00000364739 F2RP25116 425 aa1.89□□□□□ -2.11
RNU4-28P-201ENST00000364739 HNRNPH3P31942 346 aaKnown RBP1.89□□□□□ -2.11
RNU4-28P-201ENST00000364739 CEBPDP49716 269 aaPredicted RBP1.89□□□□□ -2.11
RNU4-28P-201ENST00000364739 CRADDP78560 199 aa1.89□□□□□ -2.11
RNU4-28P-201ENST00000364739 CDK5Q00535 292 aa1.89□□□□□ -2.11
RNU4-28P-201ENST00000364739 PRKCDQ05655 676 aa1.89□□□□□ -2.11
RNU4-28P-201ENST00000364739 RNASE13Q5GAN3 156 aaKnown RBP1.89□□□□□ -2.11
RNU4-28P-201ENST00000364739 CCDC73Q6ZRK6 1079 aa1.89□□□□□ -2.11
RNU4-28P-201ENST00000364739 NIPA1Q7RTP0 329 aa1.89□□□□□ -2.11
RNU4-28P-201ENST00000364739 TGIF2LXQ8IUE1 241 aa1.89□□□□□ -2.11
RNU4-28P-201ENST00000364739 LIX1Q8N485 282 aa1.89□□□□□ -2.11
RNU4-28P-201ENST00000364739 TTLQ8NG68 377 aa1.89□□□□□ -2.11
RNU4-28P-201ENST00000364739 OR10AD1Q8NGE0 317 aa1.89□□□□□ -2.11
RNU4-28P-201ENST00000364739 OR5M1Q8NGP8 315 aa1.89□□□□□ -2.11
RNU4-28P-201ENST00000364739 PIBF1Q8WXW3 757 aa1.89□□□□□ -2.11
RNU4-28P-201ENST00000364739 OR5B12Q96R08 314 aa1.89□□□□□ -2.11
RNU4-28P-201ENST00000364739 RBBP8Q99708 897 aa1.89□□□□□ -2.11
RNU4-28P-201ENST00000364739 HSD17B10Q99714 261 aaKnown RBP1.89□□□□□ -2.11
RNU4-28P-201ENST00000364739 C1orf198Q9H425 327 aa1.89□□□□□ -2.11
RNU4-28P-201ENST00000364739 FGF20Q9NP95 211 aaPredicted RBP1.89□□□□□ -2.11
RNU4-28P-201ENST00000364739 CBY1Q9Y3M2 126 aa1.89□□□□□ -2.11
RNU4-28P-201ENST00000364739 CENPVL3A0A0U1RRI6 287 aa1.88□□□□□ -2.11
RNU4-28P-201ENST00000364739 TMEM120BA0PK00 339 aa1.88□□□□□ -2.11
RNU4-28P-201ENST00000364739 NDC80O14777 642 aa1.88□□□□□ -2.11
RNU4-28P-201ENST00000364739 NUPL2O15504 423 aaKnown RBP1.88□□□□□ -2.11
RNU4-28P-201ENST00000364739 SPAG6O75602 509 aa1.88□□□□□ -2.11
RNU4-28P-201ENST00000364739 CLPXO76031 633 aa1.88□□□□□ -2.11
RNU4-28P-201ENST00000364739 WARSP23381 471 aaKnown RBP1.88□□□□□ -2.11
RNU4-28P-201ENST00000364739 GPX4P36969 197 aaPredicted RBP1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms