RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 SHBQ15464 509 aa12.52□□□□□ -0.4
CTR9-201ENST00000361367 GLIPR1L1Q6UWM5 242 aa12.52□□□□□ -0.4
CTR9-201ENST00000361367 ZNF695Q8IW36 515 aa12.52□□□□□ -0.4
CTR9-201ENST00000361367 SULF2Q8IWU5 870 aa12.52□□□□□ -0.4
CTR9-201ENST00000361367 RDH10Q8IZV5 341 aa12.52□□□□□ -0.4
CTR9-201ENST00000361367 VRK1Q99986 396 aaPredicted RBP12.52□□□□□ -0.4
CTR9-201ENST00000361367 WDR54Q9H977 334 aa12.52□□□□□ -0.4
CTR9-201ENST00000361367 GLTPQ9NZD2 209 aa12.52□□□□□ -0.4
CTR9-201ENST00000361367 LRRC37A2A6NM11 1700 aa12.52□□□□□ -0.41
CTR9-201ENST00000361367 PCM1Q15154 2024 aa12.52□□□□□ -0.41
CTR9-201ENST00000361367 IMPA2O14732 288 aa12.52□□□□□ -0.41
CTR9-201ENST00000361367 ZNF780AO75290 641 aaPredicted RBP12.52□□□□□ -0.41
CTR9-201ENST00000361367 RAF1P04049 648 aa12.52□□□□□ -0.41
CTR9-201ENST00000361367 SMIM18P0DKX4 95 aa12.52□□□□□ -0.41
CTR9-201ENST00000361367 FGL1Q08830 312 aa12.52□□□□□ -0.41
CTR9-201ENST00000361367 OR2A2Q6IF42 318 aa12.52□□□□□ -0.41
CTR9-201ENST00000361367 Q6ZTK2 550 aa12.52□□□□□ -0.41
CTR9-201ENST00000361367 ZNF321PQ8N8H1 164 aa12.52□□□□□ -0.41
CTR9-201ENST00000361367 SCGB1C1Q8TD33 95 aa12.52□□□□□ -0.41
CTR9-201ENST00000361367 FCRL1Q96LA6 429 aa12.52□□□□□ -0.41
CTR9-201ENST00000361367 DECR2Q9NUI1 292 aa12.52□□□□□ -0.41
CTR9-201ENST00000361367 B3GNT2Q9NY97 397 aa12.52□□□□□ -0.41
CTR9-201ENST00000361367 PCDHGA3Q9Y5H0 932 aa12.52□□□□□ -0.41
CTR9-201ENST00000361367 LIPCP11150 499 aa12.52□□□□□ -0.41
CTR9-201ENST00000361367 MC2RQ01718 297 aa12.52□□□□□ -0.41
CTR9-201ENST00000361367 HACD4Q5VWC8 232 aa12.52□□□□□ -0.41
CTR9-201ENST00000361367 SPINK14Q6IE38 97 aa12.52□□□□□ -0.41
CTR9-201ENST00000361367 ZBTB8BQ8NAP8 495 aaPredicted RBP12.52□□□□□ -0.41
CTR9-201ENST00000361367 OR52H1Q8NGJ2 320 aa12.52□□□□□ -0.41
CTR9-201ENST00000361367 OR4Q3Q8NH05 313 aa12.52□□□□□ -0.41
CTR9-201ENST00000361367 ARL6Q9H0F7 186 aa12.52□□□□□ -0.41
CTR9-201ENST00000361367 GPR84Q9NQS5 396 aa12.52□□□□□ -0.41
CTR9-201ENST00000361367 CACNA1IQ9P0X4 2223 aa12.51□□□□□ -0.41
CTR9-201ENST00000361367 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.51□□□□□ -0.41
CTR9-201ENST00000361367 TRIM64A6NGJ6 449 aa12.51□□□□□ -0.41
CTR9-201ENST00000361367 UBL3O95164 117 aa12.51□□□□□ -0.41
CTR9-201ENST00000361367 UBBP0CG47 229 aa12.51□□□□□ -0.41
CTR9-201ENST00000361367 IL7P13232 177 aa12.51□□□□□ -0.41
CTR9-201ENST00000361367 HMGA2P52926 109 aa12.51□□□□□ -0.41
CTR9-201ENST00000361367 RAC1P63000 192 aa12.51□□□□□ -0.41
CTR9-201ENST00000361367 CD226Q15762 336 aa12.51□□□□□ -0.41
CTR9-201ENST00000361367 MEX3BQ6ZN04 569 aaKnown RBP12.51□□□□□ -0.41
CTR9-201ENST00000361367 USP51Q70EK9 711 aa12.51□□□□□ -0.41
CTR9-201ENST00000361367 MDGA2Q7Z553 956 aa12.51□□□□□ -0.41
CTR9-201ENST00000361367 ADGRE4PQ86SQ3 457 aa12.51□□□□□ -0.41
CTR9-201ENST00000361367 ZNF610Q8N9Z0 462 aa12.51□□□□□ -0.41
CTR9-201ENST00000361367 NOXO1Q8NFA2 376 aa12.51□□□□□ -0.41
CTR9-201ENST00000361367 EXOSC3Q9NQT5 275 aaKnown RBP12.51□□□□□ -0.41
CTR9-201ENST00000361367 GDF2Q9UK05 429 aaPredicted RBP12.51□□□□□ -0.41
CTR9-201ENST00000361367 ETV7Q9Y603 341 aa12.51□□□□□ -0.41
CTR9-201ENST00000361367 DNAJC13O75165 2243 aa12.51□□□□□ -0.41
CTR9-201ENST00000361367 PRAF2O60831 178 aa12.51□□□□□ -0.41
CTR9-201ENST00000361367 CDK2P24941 298 aa12.51□□□□□ -0.41
CTR9-201ENST00000361367 APEX1P27695 318 aaKnown RBP12.51□□□□□ -0.41
CTR9-201ENST00000361367 AGTR1P30556 359 aa12.51□□□□□ -0.41
CTR9-201ENST00000361367 UQCRC1P31930 480 aa12.51□□□□□ -0.41
CTR9-201ENST00000361367 RPS19P39019 145 aaKnown RBP12.51□□□□□ -0.41
CTR9-201ENST00000361367 TAS2R46P59540 309 aa12.51□□□□□ -0.41
CTR9-201ENST00000361367 ERVK-16P61578 105 aa12.51□□□□□ -0.41
CTR9-201ENST00000361367 TNK1Q13470 666 aa12.51□□□□□ -0.41
CTR9-201ENST00000361367 SLC17A1Q14916 467 aa12.51□□□□□ -0.41
CTR9-201ENST00000361367 SOWAHCQ53LP3 525 aaPredicted RBP12.51□□□□□ -0.41
CTR9-201ENST00000361367 DESI1Q6ICB0 168 aa12.51□□□□□ -0.41
CTR9-201ENST00000361367 WFDC8Q8IUA0 241 aa12.51□□□□□ -0.41
CTR9-201ENST00000361367 SPIN2AQ99865 258 aa12.51□□□□□ -0.41
CTR9-201ENST00000361367 SPIN2BQ9BPZ2 258 aa12.51□□□□□ -0.41
CTR9-201ENST00000361367 ABHD6Q9BV23 337 aa12.51□□□□□ -0.41
CTR9-201ENST00000361367 FBXO8Q9NRD0 319 aa12.51□□□□□ -0.41
CTR9-201ENST00000361367 GPR173Q9NS66 373 aa12.51□□□□□ -0.41
CTR9-201ENST00000361367 PILRAQ9UKJ1 303 aa12.51□□□□□ -0.41
CTR9-201ENST00000361367 LOC100289279A0A1B0GTE1 492 aa12.51□□□□□ -0.41
CTR9-201ENST00000361367 TNFRSF10AO00220 468 aa12.51□□□□□ -0.41
CTR9-201ENST00000361367 ARPC3O15145 178 aa12.51□□□□□ -0.41
CTR9-201ENST00000361367 ZMYND11Q15326 602 aa12.51□□□□□ -0.41
CTR9-201ENST00000361367 MRGPREQ86SM8 312 aa12.51□□□□□ -0.41
CTR9-201ENST00000361367 OR4M1Q8NGD0 313 aa12.51□□□□□ -0.41
CTR9-201ENST00000361367 OR2T35Q8NGX2 323 aa12.51□□□□□ -0.41
CTR9-201ENST00000361367 OIT3Q8WWZ8 545 aa12.51□□□□□ -0.41
CTR9-201ENST00000361367 FOXB1Q99853 325 aa12.51□□□□□ -0.41
CTR9-201ENST00000361367 RAB33BQ9H082 229 aa12.51□□□□□ -0.41
CTR9-201ENST00000361367 ZMAT3Q9HA38 289 aaKnown RBP12.51□□□□□ -0.41
CTR9-201ENST00000361367 SLC22A13Q9Y226 551 aa12.51□□□□□ -0.41
CTR9-201ENST00000361367 SCN5AQ14524 2016 aa12.51□□□□□ -0.41
CTR9-201ENST00000361367 BET1O15155 118 aa12.5□□□□□ -0.41
CTR9-201ENST00000361367 RP2O75695 350 aa12.5□□□□□ -0.41
CTR9-201ENST00000361367 SC5DO75845 299 aa12.5□□□□□ -0.41
CTR9-201ENST00000361367 GP1BAP07359 652 aa12.5□□□□□ -0.41
CTR9-201ENST00000361367 GP2P55259 537 aaKnown RBP12.5□□□□□ -0.41
CTR9-201ENST00000361367 APOOLQ6UXV4 268 aa12.5□□□□□ -0.41
CTR9-201ENST00000361367 TRILQ7L0X0 811 aa12.5□□□□□ -0.41
CTR9-201ENST00000361367 RHNO1Q9BSD3 238 aa12.5□□□□□ -0.41
CTR9-201ENST00000361367 SIAEQ9HAT2 523 aa12.5□□□□□ -0.41
CTR9-201ENST00000361367 ZNF71Q9NQZ8 489 aaPredicted RBP12.5□□□□□ -0.41
CTR9-201ENST00000361367 TAS2R4Q9NYW5 299 aa12.5□□□□□ -0.41
CTR9-201ENST00000361367 OR5H15A6NDH6 313 aa12.5□□□□□ -0.41
CTR9-201ENST00000361367 CD82P27701 267 aa12.5□□□□□ -0.41
CTR9-201ENST00000361367 RBP2P50120 134 aa12.5□□□□□ -0.41
CTR9-201ENST00000361367 CDK5R1Q15078 307 aa12.5□□□□□ -0.41
CTR9-201ENST00000361367 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.5□□□□□ -0.41
CTR9-201ENST00000361367 APOBEC4Q8WW27 367 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms