RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 MDGA2Q7Z553 956 aa20.23■□□□□ 0.83
LDB1-201ENST00000361198 SPICQ8N5J4 248 aa20.23■□□□□ 0.83
LDB1-201ENST00000361198 C5orf34Q96MH7 638 aa20.23■□□□□ 0.83
LDB1-201ENST00000361198 SMOC1Q9H4F8 434 aa20.23■□□□□ 0.83
LDB1-201ENST00000361198 NOX3Q9HBY0 568 aa20.23■□□□□ 0.83
LDB1-201ENST00000361198 SDHAF3Q9NRP4 125 aa20.23■□□□□ 0.83
LDB1-201ENST00000361198 NXT1Q9UKK6 140 aaKnown RBP20.23■□□□□ 0.83
LDB1-201ENST00000361198 LOC102723996A0A087X1L8 192 aa20.22■□□□□ 0.83
LDB1-201ENST00000361198 SHOXO15266 292 aa20.22■□□□□ 0.83
LDB1-201ENST00000361198 IFNA7P01567 189 aa20.22■□□□□ 0.83
LDB1-201ENST00000361198 CSRP1P21291 193 aaKnown RBP20.22■□□□□ 0.83
LDB1-201ENST00000361198 FOXK1P85037 733 aa20.22■□□□□ 0.83
LDB1-201ENST00000361198 HSF1Q00613 529 aa20.22■□□□□ 0.83
LDB1-201ENST00000361198 ROM1Q03395 351 aa20.22■□□□□ 0.83
LDB1-201ENST00000361198 TRA2AQ13595 282 aaKnown RBP eCLIP20.22■□□□□ 0.83
LDB1-201ENST00000361198 EIF2B1Q14232 305 aaKnown RBP20.22■□□□□ 0.83
LDB1-201ENST00000361198 TEX30Q5JUR7 227 aa20.22■□□□□ 0.83
LDB1-201ENST00000361198 FDX2Q6P4F2 183 aa20.22■□□□□ 0.83
LDB1-201ENST00000361198 RNF128Q8TEB7 428 aa20.22■□□□□ 0.83
LDB1-201ENST00000361198 PPP1R14AQ96A00 147 aa20.22■□□□□ 0.83
LDB1-201ENST00000361198 KCNK17Q96T54 332 aa20.22■□□□□ 0.83
LDB1-201ENST00000361198 POTEKPQ9BYX7 375 aa20.22■□□□□ 0.83
LDB1-201ENST00000361198 CLEC4MQ9H2X3 399 aaPredicted RBP20.22■□□□□ 0.83
LDB1-201ENST00000361198 SLC22A13Q9Y226 551 aa20.22■□□□□ 0.83
LDB1-201ENST00000361198 IGKV1D-43A0A0B4J1Z2 117 aa20.22■□□□□ 0.83
LDB1-201ENST00000361198 RPS10-NUDT3A0A1W2PQS6 291 aa20.22■□□□□ 0.83
LDB1-201ENST00000361198 A6NIZ1 184 aa20.22■□□□□ 0.83
LDB1-201ENST00000361198 ARPC1BO15143 372 aaKnown RBP20.22■□□□□ 0.83
LDB1-201ENST00000361198 ICMTO60725 284 aa20.22■□□□□ 0.83
LDB1-201ENST00000361198 OPN1LWP04000 364 aa20.22■□□□□ 0.83
LDB1-201ENST00000361198 MAS1P04201 325 aa20.22■□□□□ 0.83
LDB1-201ENST00000361198 DAP3P51398 398 aaKnown RBP20.22■□□□□ 0.83
LDB1-201ENST00000361198 TAS2R20P59543 309 aa20.22■□□□□ 0.83
LDB1-201ENST00000361198 RAP1BP61224 184 aa20.22■□□□□ 0.83
LDB1-201ENST00000361198 RAP1AP62834 184 aa20.22■□□□□ 0.83
LDB1-201ENST00000361198 LPAL2Q16609 132 aa20.22■□□□□ 0.83
LDB1-201ENST00000361198 OR7E24Q6IFN5 339 aa20.22■□□□□ 0.83
LDB1-201ENST00000361198 SLC23A3Q6PIS1 610 aa20.22■□□□□ 0.83
LDB1-201ENST00000361198 FAM198BQ6UWH4 519 aa20.22■□□□□ 0.83
LDB1-201ENST00000361198 KRT77Q7Z794 578 aa20.22■□□□□ 0.83
LDB1-201ENST00000361198 OR5M1Q8NGP8 315 aa20.22■□□□□ 0.83
LDB1-201ENST00000361198 DPCDQ9BVM2 203 aaPredicted RBP20.22■□□□□ 0.83
LDB1-201ENST00000361198 PTRH2Q9Y3E5 179 aaKnown RBP20.22■□□□□ 0.83
LDB1-201ENST00000361198 KLF7O75840 302 aaPredicted RBP20.21■□□□□ 0.83
LDB1-201ENST00000361198 SSTR2P30874 369 aa20.21■□□□□ 0.83
LDB1-201ENST00000361198 MYBPHQ13203 477 aa20.21■□□□□ 0.83
LDB1-201ENST00000361198 CLLU1Q5K131 121 aa20.21■□□□□ 0.83
LDB1-201ENST00000361198 KCTD18Q6PI47 426 aaPredicted RBP20.21■□□□□ 0.83
LDB1-201ENST00000361198 UXS1Q8NBZ7 420 aa20.21■□□□□ 0.83
LDB1-201ENST00000361198 OR2M3Q8NG83 312 aa20.21■□□□□ 0.83
LDB1-201ENST00000361198 TMEM185BQ9H7F4 350 aa20.21■□□□□ 0.83
LDB1-201ENST00000361198 ALKBH4Q9NXW9 302 aa20.21■□□□□ 0.83
LDB1-201ENST00000361198 GTF2A1LQ9UNN4 478 aa20.21■□□□□ 0.83
LDB1-201ENST00000361198 IGHV1-45A0A0A0MS14 117 aa20.2■□□□□ 0.82
LDB1-201ENST00000361198 RAD1O60671 282 aa20.2■□□□□ 0.82
LDB1-201ENST00000361198 IL5P05113 134 aa20.2■□□□□ 0.82
LDB1-201ENST00000361198 CFPP27918 469 aa20.2■□□□□ 0.82
LDB1-201ENST00000361198 DCTDP32321 178 aa20.2■□□□□ 0.82
LDB1-201ENST00000361198 MAP2K6P52564 334 aa20.2■□□□□ 0.82
LDB1-201ENST00000361198 EXOSC2Q13868 293 aaKnown RBP20.2■□□□□ 0.82
LDB1-201ENST00000361198 LINC00303Q3SY05 128 aa20.2■□□□□ 0.82
LDB1-201ENST00000361198 SIGIRRQ6IA17 410 aa20.2■□□□□ 0.82
LDB1-201ENST00000361198 SLC26A10Q8NG04 563 aa20.2■□□□□ 0.82
LDB1-201ENST00000361198 MCHR2Q969V1 340 aa20.2■□□□□ 0.82
LDB1-201ENST00000361198 GLTPQ9NZD2 209 aa20.2■□□□□ 0.82
LDB1-201ENST00000361198 B3GALT5Q9Y2C3 310 aa20.2■□□□□ 0.82
LDB1-201ENST00000361198 CHCHD2Q9Y6H1 151 aaPredicted RBP20.2■□□□□ 0.82
LDB1-201ENST00000361198 NPIPB13A6NJU9 1138 aa20.2■□□□□ 0.82
LDB1-201ENST00000361198 NPIPB4C9JG80 1138 aa20.2■□□□□ 0.82
LDB1-201ENST00000361198 GLSO94925 669 aaPredicted RBP20.2■□□□□ 0.82
LDB1-201ENST00000361198 PTHLHP12272 177 aa20.2■□□□□ 0.82
LDB1-201ENST00000361198 PTGS2P35354 604 aa20.2■□□□□ 0.82
LDB1-201ENST00000361198 RAD52P43351 418 aa20.2■□□□□ 0.82
LDB1-201ENST00000361198 MC2RQ01718 297 aa20.2■□□□□ 0.82
LDB1-201ENST00000361198 DHODHQ02127 395 aa20.2■□□□□ 0.82
LDB1-201ENST00000361198 TOR2AQ5JU69 321 aa20.2■□□□□ 0.82
LDB1-201ENST00000361198 PRAMEF20Q5VT98 475 aa20.2■□□□□ 0.82
LDB1-201ENST00000361198 RFPL4BQ6ZWI9 263 aa20.2■□□□□ 0.82
LDB1-201ENST00000361198 WDSUB1Q8N9V3 476 aa20.2■□□□□ 0.82
LDB1-201ENST00000361198 RBP7Q96R05 134 aa20.2■□□□□ 0.82
LDB1-201ENST00000361198 EMC6Q9BV81 110 aa20.2■□□□□ 0.82
LDB1-201ENST00000361198 SERINC1Q9NRX5 453 aa20.2■□□□□ 0.82
LDB1-201ENST00000361198 PIPOXQ9P0Z9 390 aa20.2■□□□□ 0.82
LDB1-201ENST00000361198 LRP12Q9Y561 859 aa20.2■□□□□ 0.82
LDB1-201ENST00000361198 PCDHGA5Q9Y5G8 931 aa20.2■□□□□ 0.82
LDB1-201ENST00000361198 NDUFB6O95139 128 aa20.19■□□□□ 0.82
LDB1-201ENST00000361198 MFGE8Q08431 387 aaPredicted RBP20.19■□□□□ 0.82
LDB1-201ENST00000361198 GRK1Q15835 563 aa20.19■□□□□ 0.82
LDB1-201ENST00000361198 SLC25A25Q6KCM7 469 aa20.19■□□□□ 0.82
LDB1-201ENST00000361198 TMPRSS12Q86WS5 348 aa20.19■□□□□ 0.82
LDB1-201ENST00000361198 SEC22CQ9BRL7 303 aa20.19■□□□□ 0.82
LDB1-201ENST00000361198 B3GAT1Q9P2W7 334 aa20.19■□□□□ 0.82
LDB1-201ENST00000361198 TMA7Q9Y2S6 64 aaKnown RBP20.19■□□□□ 0.82
LDB1-201ENST00000361198 SNRPGP15A8MWD9 76 aa20.19■□□□□ 0.82
LDB1-201ENST00000361198 H0YC42 278 aa20.19■□□□□ 0.82
LDB1-201ENST00000361198 XRCC3O43542 346 aa20.19■□□□□ 0.82
LDB1-201ENST00000361198 FTMTQ8N4E7 242 aa20.19■□□□□ 0.82
LDB1-201ENST00000361198 OR52N5Q8NH56 324 aa20.19■□□□□ 0.82
LDB1-201ENST00000361198 TSEN15Q8WW01 171 aaKnown RBP20.19■□□□□ 0.82
LDB1-201ENST00000361198 IMMP1LQ96LU5 166 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms