RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 H3BNC9 293 aa12.72□□□□□ -0.37
SMC5-201ENST00000361138 CYB5BO43169 146 aa12.72□□□□□ -0.37
SMC5-201ENST00000361138 CYTIPO60759 359 aa12.72□□□□□ -0.37
SMC5-201ENST00000361138 H2AFB1P0C5Y9 115 aa12.72□□□□□ -0.37
SMC5-201ENST00000361138 AKR1C3P42330 323 aa12.72□□□□□ -0.37
SMC5-201ENST00000361138 EMDP50402 254 aa12.72□□□□□ -0.37
SMC5-201ENST00000361138 ZNF687Q8N1G0 1237 aa12.72□□□□□ -0.37
SMC5-201ENST00000361138 ANKRD9Q96BM1 317 aaPredicted RBP12.72□□□□□ -0.37
SMC5-201ENST00000361138 ADAMTSL1Q8N6G6 1762 aa12.72□□□□□ -0.37
SMC5-201ENST00000361138 LILRB5O75023 590 aa12.72□□□□□ -0.37
SMC5-201ENST00000361138 OPN1LWP04000 364 aa12.72□□□□□ -0.37
SMC5-201ENST00000361138 ZFP36L2P47974 494 aaKnown RBP12.72□□□□□ -0.37
SMC5-201ENST00000361138 DPPA2Q7Z7J5 298 aa12.72□□□□□ -0.37
SMC5-201ENST00000361138 LRRC18Q8N456 261 aa12.72□□□□□ -0.37
SMC5-201ENST00000361138 PHYHIPLQ96FC7 376 aa12.72□□□□□ -0.37
SMC5-201ENST00000361138 ADGRL4Q9HBW9 690 aa12.72□□□□□ -0.37
SMC5-201ENST00000361138 DNMT3BQ9UBC3 853 aaKnown RBP12.72□□□□□ -0.37
SMC5-201ENST00000361138 ZNF346Q9UL40 294 aaKnown RBP12.72□□□□□ -0.37
SMC5-201ENST00000361138 DAPP1Q9UN19 280 aa12.72□□□□□ -0.37
SMC5-201ENST00000361138 PTHLHP12272 177 aa12.72□□□□□ -0.37
SMC5-201ENST00000361138 PHLDA2Q53GA4 152 aa12.72□□□□□ -0.37
SMC5-201ENST00000361138 ABI3BPQ7Z7G0 1075 aa12.72□□□□□ -0.37
SMC5-201ENST00000361138 EXD3Q8N9H8 876 aa12.72□□□□□ -0.37
SMC5-201ENST00000361138 C19orf47Q8N9M1 422 aaKnown RBP12.72□□□□□ -0.37
SMC5-201ENST00000361138 POC1BQ8TC44 478 aa12.72□□□□□ -0.37
SMC5-201ENST00000361138 MARCH1Q8TCQ1 289 aa12.72□□□□□ -0.37
SMC5-201ENST00000361138 BTF3L4Q96K17 158 aa12.72□□□□□ -0.37
SMC5-201ENST00000361138 SLC46A1Q96NT5 459 aa12.72□□□□□ -0.37
SMC5-201ENST00000361138 KCND3Q9UK17 655 aa12.72□□□□□ -0.37
SMC5-201ENST00000361138 A0A1W2PPV4 95 aa12.72□□□□□ -0.37
SMC5-201ENST00000361138 ZFP92A6NM28 416 aa12.72□□□□□ -0.37
SMC5-201ENST00000361138 ZNF724A8MTY0 619 aa12.72□□□□□ -0.37
SMC5-201ENST00000361138 HCRTR1O43613 425 aa12.72□□□□□ -0.37
SMC5-201ENST00000361138 AADACP22760 399 aa12.72□□□□□ -0.37
SMC5-201ENST00000361138 TM4SF4P48230 202 aa12.72□□□□□ -0.37
SMC5-201ENST00000361138 BIDP55957 195 aa12.72□□□□□ -0.37
SMC5-201ENST00000361138 B3GNTL1Q67FW5 361 aaPredicted RBP12.72□□□□□ -0.37
SMC5-201ENST00000361138 SLC39A5Q6ZMH5 540 aa12.72□□□□□ -0.37
SMC5-201ENST00000361138 CPEB2Q7Z5Q1 589 aaKnown RBP12.72□□□□□ -0.37
SMC5-201ENST00000361138 CCNL2Q96S94 520 aaPredicted RBP12.72□□□□□ -0.37
SMC5-201ENST00000361138 XIRP1Q702N8 1843 aaKnown RBP12.72□□□□□ -0.37
SMC5-201ENST00000361138 TAS2R30P59541 319 aa12.71□□□□□ -0.37
SMC5-201ENST00000361138 FXNQ16595 210 aa12.71□□□□□ -0.37
SMC5-201ENST00000361138 OR51A4Q8NGJ6 313 aa12.71□□□□□ -0.37
SMC5-201ENST00000361138 TAAR8Q969N4 342 aa12.71□□□□□ -0.37
SMC5-201ENST00000361138 ARSGQ96EG1 525 aa12.71□□□□□ -0.37
SMC5-201ENST00000361138 SLC6A18Q96N87 628 aa12.71□□□□□ -0.37
SMC5-201ENST00000361138 SLC39A9Q9NUM3 307 aa12.71□□□□□ -0.37
SMC5-201ENST00000361138 GAR1Q9NY12 217 aaKnown RBP12.71□□□□□ -0.37
SMC5-201ENST00000361138 FLVCR1Q9Y5Y0 555 aa12.71□□□□□ -0.37
SMC5-201ENST00000361138 THSD7AQ9UPZ6 1657 aa12.71□□□□□ -0.37
SMC5-201ENST00000361138 ZNF354AO60765 605 aaPredicted RBP12.71□□□□□ -0.37
SMC5-201ENST00000361138 NXPH3O95157 252 aa12.71□□□□□ -0.37
SMC5-201ENST00000361138 RAB11AP62491 216 aa12.71□□□□□ -0.37
SMC5-201ENST00000361138 DPTQ07507 201 aa12.71□□□□□ -0.37
SMC5-201ENST00000361138 ZNF485Q8NCK3 441 aa12.71□□□□□ -0.37
SMC5-201ENST00000361138 OR14A16Q8NHC5 309 aa12.71□□□□□ -0.37
SMC5-201ENST00000361138 MR1Q95460 341 aa12.71□□□□□ -0.37
SMC5-201ENST00000361138 SGK3Q96BR1 496 aa12.71□□□□□ -0.37
SMC5-201ENST00000361138 LCORQ96JN0 433 aaPredicted RBP12.71□□□□□ -0.37
SMC5-201ENST00000361138 SLC52A3Q9NQ40 469 aa12.71□□□□□ -0.37
SMC5-201ENST00000361138 PLEKHM1Q9Y4G2 1056 aa12.71□□□□□ -0.37
SMC5-201ENST00000361138 LOC102725191A0A1B0GVB3 256 aa12.71□□□□□ -0.37
SMC5-201ENST00000361138 GABREP78334 506 aa12.71□□□□□ -0.37
SMC5-201ENST00000361138 HAGHQ16775 308 aa12.71□□□□□ -0.37
SMC5-201ENST00000361138 PLA1AQ53H76 456 aa12.71□□□□□ -0.37
SMC5-201ENST00000361138 IGSF11Q5DX21 431 aa12.71□□□□□ -0.37
SMC5-201ENST00000361138 CST9LP1Q5W188 147 aa12.71□□□□□ -0.37
SMC5-201ENST00000361138 MRPL21Q7Z2W9 205 aaKnown RBP12.71□□□□□ -0.37
SMC5-201ENST00000361138 NUDCD2Q8WVJ2 157 aa12.71□□□□□ -0.37
SMC5-201ENST00000361138 BADQ92934 168 aa12.71□□□□□ -0.37
SMC5-201ENST00000361138 PAPOLGQ9BWT3 736 aaKnown RBP12.71□□□□□ -0.37
SMC5-201ENST00000361138 TMEM100Q9NV29 134 aa12.71□□□□□ -0.37
SMC5-201ENST00000361138 PCDHGA5Q9Y5G8 931 aa12.71□□□□□ -0.37
SMC5-201ENST00000361138 HPNP05981 417 aa12.71□□□□□ -0.38
SMC5-201ENST00000361138 HBG1P69891 147 aa12.71□□□□□ -0.38
SMC5-201ENST00000361138 HBG2P69892 147 aa12.71□□□□□ -0.38
SMC5-201ENST00000361138 WDR5BQ86VZ2 330 aa12.71□□□□□ -0.38
SMC5-201ENST00000361138 EVPLQ92817 2033 aa12.71□□□□□ -0.38
SMC5-201ENST00000361138 NFYBP25208 207 aa12.71□□□□□ -0.38
SMC5-201ENST00000361138 TMEM41BQ5BJD5 291 aa12.71□□□□□ -0.38
SMC5-201ENST00000361138 MANEAQ5SRI9 462 aa12.71□□□□□ -0.38
SMC5-201ENST00000361138 OR5M8Q8NGP6 311 aa12.71□□□□□ -0.38
SMC5-201ENST00000361138 MS4A7Q9GZW8 240 aaPredicted RBP12.71□□□□□ -0.38
SMC5-201ENST00000361138 ZCCHC4Q9H5U6 513 aa12.71□□□□□ -0.38
SMC5-201ENST00000361138 OPA3Q9H6K4 179 aa12.71□□□□□ -0.38
SMC5-201ENST00000361138 PLEKHA2Q9HB19 425 aa12.71□□□□□ -0.38
SMC5-201ENST00000361138 PADI1Q9ULC6 663 aa12.71□□□□□ -0.38
SMC5-201ENST00000361138 TGOLN2O43493 480 aa12.7□□□□□ -0.38
SMC5-201ENST00000361138 HNRNPKP61978 463 aaKnown RBP eCLIP12.7□□□□□ -0.38
SMC5-201ENST00000361138 RAB31Q13636 194 aa12.7□□□□□ -0.38
SMC5-201ENST00000361138 CLEC9AQ6UXN8 241 aa12.7□□□□□ -0.38
SMC5-201ENST00000361138 LRRTM1Q86UE6 522 aa12.7□□□□□ -0.38
SMC5-201ENST00000361138 STPG2Q8N412 459 aa12.7□□□□□ -0.38
SMC5-201ENST00000361138 BCORP1Q8N888 145 aa12.7□□□□□ -0.38
SMC5-201ENST00000361138 SECTM1Q8WVN6 248 aa12.7□□□□□ -0.38
SMC5-201ENST00000361138 IL1F10Q8WWZ1 152 aa12.7□□□□□ -0.38
SMC5-201ENST00000361138 PIGCQ92535 297 aa12.7□□□□□ -0.38
SMC5-201ENST00000361138 CNRIP1Q96F85 164 aaPredicted RBP12.7□□□□□ -0.38
SMC5-201ENST00000361138 TCTN2Q96GX1 697 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms