RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 SLC24A5Q71RS6 500 aa4.05□□□□□ -1.76
PTPN22-201ENST00000359785 SSX7Q7RTT5 188 aa4.05□□□□□ -1.76
PTPN22-201ENST00000359785 SSX6Q7RTT6 188 aa4.05□□□□□ -1.76
PTPN22-201ENST00000359785 CPOQ8IVL8 374 aa4.05□□□□□ -1.76
PTPN22-201ENST00000359785 TMEM183AQ8IXX5 376 aa4.05□□□□□ -1.76
PTPN22-201ENST00000359785 IQCF1Q8N6M8 205 aa4.05□□□□□ -1.76
PTPN22-201ENST00000359785 COX18Q8N8Q8 333 aa4.05□□□□□ -1.76
PTPN22-201ENST00000359785 OR51A2Q8NGJ7 313 aa4.05□□□□□ -1.76
PTPN22-201ENST00000359785 HMGB4Q8WW32 186 aa4.05□□□□□ -1.76
PTPN22-201ENST00000359785 FGGYQ96C11 551 aa4.05□□□□□ -1.76
PTPN22-201ENST00000359785 KIRREL1Q96J84 757 aa4.05□□□□□ -1.76
PTPN22-201ENST00000359785 PHB2Q99623 299 aa4.05□□□□□ -1.76
PTPN22-201ENST00000359785 HDAC8Q9BY41 377 aa4.05□□□□□ -1.76
PTPN22-201ENST00000359785 COMMD4Q9H0A8 199 aa4.05□□□□□ -1.76
PTPN22-201ENST00000359785 POFUT1Q9H488 388 aa4.05□□□□□ -1.76
PTPN22-201ENST00000359785 IL21Q9HBE4 155 aa4.05□□□□□ -1.76
PTPN22-201ENST00000359785 AMBNQ9NP70 447 aa4.05□□□□□ -1.76
PTPN22-201ENST00000359785 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.05□□□□□ -1.76
PTPN22-201ENST00000359785 FAM212BQ9NTI7 297 aaPredicted RBP4.05□□□□□ -1.76
PTPN22-201ENST00000359785 AURKAIP1Q9NWT8 199 aaPredicted RBP4.05□□□□□ -1.76
PTPN22-201ENST00000359785 KIAA1456Q9P272 454 aa4.05□□□□□ -1.76
PTPN22-201ENST00000359785 CRLS1Q9UJA2 301 aa4.05□□□□□ -1.76
PTPN22-201ENST00000359785 LRFN2Q9ULH4 789 aa4.05□□□□□ -1.76
PTPN22-201ENST00000359785 CA14Q9ULX7 337 aa4.05□□□□□ -1.76
PTPN22-201ENST00000359785 OR10H1Q9Y4A9 318 aa4.05□□□□□ -1.76
PTPN22-201ENST00000359785 B3GALT1Q9Y5Z6 326 aa4.05□□□□□ -1.76
PTPN22-201ENST00000359785 ARL2-SNX15V9GYD0 113 aa4.05□□□□□ -1.76
PTPN22-201ENST00000359785 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.05□□□□□ -1.76
PTPN22-201ENST00000359785 NCF1BA6NI72 391 aaPredicted RBP4.05□□□□□ -1.76
PTPN22-201ENST00000359785 IQCF5A8MTL0 148 aa4.05□□□□□ -1.76
PTPN22-201ENST00000359785 NCF1CA8MVU1 366 aaPredicted RBP4.05□□□□□ -1.76
PTPN22-201ENST00000359785 C22orf46C9J442 243 aa4.05□□□□□ -1.76
PTPN22-201ENST00000359785 FAM227AF5H4B4 570 aa4.05□□□□□ -1.76
PTPN22-201ENST00000359785 MASP2O00187 686 aa4.05□□□□□ -1.76
PTPN22-201ENST00000359785 SGCEO43556 437 aa4.05□□□□□ -1.76
PTPN22-201ENST00000359785 HCRTR2O43614 444 aa4.05□□□□□ -1.76
PTPN22-201ENST00000359785 SYNGR4O95473 234 aa4.05□□□□□ -1.76
PTPN22-201ENST00000359785 SNRPBP14678 240 aaKnown RBP4.05□□□□□ -1.76
PTPN22-201ENST00000359785 CCKARP32238 428 aa4.05□□□□□ -1.76
PTPN22-201ENST00000359785 BCL6P41182 706 aa4.05□□□□□ -1.76
PTPN22-201ENST00000359785 MAGEB1P43366 347 aa4.05□□□□□ -1.76
PTPN22-201ENST00000359785 RPS23P62266 143 aaKnown RBP4.05□□□□□ -1.76
PTPN22-201ENST00000359785 FOXK1P85037 733 aa4.05□□□□□ -1.76
PTPN22-201ENST00000359785 TNFRSF17Q02223 184 aa4.05□□□□□ -1.76
PTPN22-201ENST00000359785 SLBPQ14493 270 aaKnown RBP eCLIP4.05□□□□□ -1.76
PTPN22-201ENST00000359785 CLINT1Q14677 625 aa4.05□□□□□ -1.76
PTPN22-201ENST00000359785 OR8B8Q15620 311 aa4.05□□□□□ -1.76
PTPN22-201ENST00000359785 ZNF791Q3KP31 576 aaPredicted RBP4.05□□□□□ -1.76
PTPN22-201ENST00000359785 PRAMEF14Q5SWL7 426 aa4.05□□□□□ -1.76
PTPN22-201ENST00000359785 SLC22A25Q6T423 547 aa4.05□□□□□ -1.76
PTPN22-201ENST00000359785 THSD4Q6ZMP0 1018 aa4.05□□□□□ -1.76
PTPN22-201ENST00000359785 CCDC116Q8IYX3 515 aa4.05□□□□□ -1.76
PTPN22-201ENST00000359785 BEST3Q8N1M1 668 aa4.05□□□□□ -1.76
PTPN22-201ENST00000359785 ZNF283Q8N7M2 679 aa4.05□□□□□ -1.76
PTPN22-201ENST00000359785 RNASE11Q8TAA1 199 aaKnown RBP4.05□□□□□ -1.76
PTPN22-201ENST00000359785 WFIKKN2Q8TEU8 576 aa4.05□□□□□ -1.76
PTPN22-201ENST00000359785 WDR89Q96FK6 387 aaPredicted RBP4.05□□□□□ -1.76
PTPN22-201ENST00000359785 C2orf50Q96LR7 162 aa4.05□□□□□ -1.76
PTPN22-201ENST00000359785 ZNF385AQ96PM9 386 aaKnown RBP4.05□□□□□ -1.76
PTPN22-201ENST00000359785 GINS4Q9BRT9 223 aa4.05□□□□□ -1.76
PTPN22-201ENST00000359785 EBPLQ9BY08 206 aa4.05□□□□□ -1.76
PTPN22-201ENST00000359785 SPRTNQ9H040 489 aaPredicted RBP4.05□□□□□ -1.76
PTPN22-201ENST00000359785 WNT5BQ9H1J7 359 aa4.05□□□□□ -1.76
PTPN22-201ENST00000359785 SRMSQ9H3Y6 488 aa4.05□□□□□ -1.76
PTPN22-201ENST00000359785 Q9N2J8 555 aa4.05□□□□□ -1.76
PTPN22-201ENST00000359785 DNAJB12Q9NXW2 375 aaKnown RBP4.05□□□□□ -1.76
PTPN22-201ENST00000359785 DPP7Q9UHL4 492 aa4.05□□□□□ -1.76
PTPN22-201ENST00000359785 RAB22AQ9UL26 194 aa4.05□□□□□ -1.76
PTPN22-201ENST00000359785 DOCK3Q8IZD9 2030 aa4.04□□□□□ -1.76
PTPN22-201ENST00000359785 RIIAD1A6NNX1 92 aa4.04□□□□□ -1.76
PTPN22-201ENST00000359785 UPK3BL1B0FP48 263 aa4.04□□□□□ -1.76
PTPN22-201ENST00000359785 UPK3BL2E5RIL1 263 aa4.04□□□□□ -1.76
PTPN22-201ENST00000359785 J3QR06 171 aa4.04□□□□□ -1.76
PTPN22-201ENST00000359785 LGALS8O00214 317 aa4.04□□□□□ -1.76
PTPN22-201ENST00000359785 GOSR2O14653 212 aa4.04□□□□□ -1.76
PTPN22-201ENST00000359785 ARPC5O15511 151 aa4.04□□□□□ -1.76
PTPN22-201ENST00000359785 GALR2O43603 387 aaPredicted RBP4.04□□□□□ -1.76
PTPN22-201ENST00000359785 TMPRSS11DO60235 418 aa4.04□□□□□ -1.76
PTPN22-201ENST00000359785 FADS1O60427 444 aa4.04□□□□□ -1.76
PTPN22-201ENST00000359785 NDUFB2O95178 105 aa4.04□□□□□ -1.76
PTPN22-201ENST00000359785 OR8G3PP0DMU2 310 aa4.04□□□□□ -1.76
PTPN22-201ENST00000359785 POU2F1P14859 743 aa4.04□□□□□ -1.76
PTPN22-201ENST00000359785 ALOX5APP20292 161 aa4.04□□□□□ -1.76
PTPN22-201ENST00000359785 TNFRSF1BP20333 461 aa4.04□□□□□ -1.76
PTPN22-201ENST00000359785 BCKDHBP21953 392 aa4.04□□□□□ -1.76
PTPN22-201ENST00000359785 AVPR2P30518 371 aa4.04□□□□□ -1.76
PTPN22-201ENST00000359785 DLSTP36957 453 aa4.04□□□□□ -1.76
PTPN22-201ENST00000359785 MDH2P40926 338 aaKnown RBP4.04□□□□□ -1.76
PTPN22-201ENST00000359785 POU3F4P49335 361 aa4.04□□□□□ -1.76
PTPN22-201ENST00000359785 SELENOTP62341 195 aa4.04□□□□□ -1.76
PTPN22-201ENST00000359785 SKP1P63208 163 aa4.04□□□□□ -1.76
PTPN22-201ENST00000359785 MXD1Q05195 221 aa4.04□□□□□ -1.76
PTPN22-201ENST00000359785 ELOBQ15370 118 aa4.04□□□□□ -1.76
PTPN22-201ENST00000359785 KRBOX4Q5JUW0 171 aa4.04□□□□□ -1.76
PTPN22-201ENST00000359785 PRAMEF18Q5VWM3 479 aa4.04□□□□□ -1.76
PTPN22-201ENST00000359785 ABHD17CQ6PCB6 329 aa4.04□□□□□ -1.76
PTPN22-201ENST00000359785 KCTD9Q7L273 389 aa4.04□□□□□ -1.76
PTPN22-201ENST00000359785 RBM45Q8IUH3 476 aaKnown RBP4.04□□□□□ -1.76
PTPN22-201ENST00000359785 SPNS2Q8IVW8 549 aa4.04□□□□□ -1.76
PTPN22-201ENST00000359785 RYBPQ8N488 228 aaPredicted RBP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms