RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 B3GNT2Q9NY97 397 aa13.29□□□□□ -0.28
TPM1-206ENST00000358278 CRIM1Q9NZV1 1036 aa13.29□□□□□ -0.28
TPM1-206ENST00000358278 CYB5R1Q9UHQ9 305 aa13.29□□□□□ -0.28
TPM1-206ENST00000358278 TIMM10BQ9Y5J6 103 aa13.29□□□□□ -0.28
TPM1-206ENST00000358278 HRNRQ86YZ3 2850 aaPredicted RBP13.29□□□□□ -0.28
TPM1-206ENST00000358278 SGCEO43556 437 aa13.28□□□□□ -0.28
TPM1-206ENST00000358278 APOL3O95236 402 aa13.28□□□□□ -0.28
TPM1-206ENST00000358278 DBTP11182 482 aaKnown RBP13.28□□□□□ -0.28
TPM1-206ENST00000358278 IDH3GP51553 393 aaPredicted RBP13.28□□□□□ -0.28
TPM1-206ENST00000358278 PLP2Q04941 152 aa13.28□□□□□ -0.28
TPM1-206ENST00000358278 PABPC1L2AQ5JQF8 200 aa13.28□□□□□ -0.28
TPM1-206ENST00000358278 TEX30Q5JUR7 227 aa13.28□□□□□ -0.28
TPM1-206ENST00000358278 SLC18B1Q6NT16 456 aa13.28□□□□□ -0.28
TPM1-206ENST00000358278 SHFQ7M4L6 423 aa13.28□□□□□ -0.28
TPM1-206ENST00000358278 SLC16A9Q7RTY1 509 aa13.28□□□□□ -0.28
TPM1-206ENST00000358278 ALDH16A1Q8IZ83 802 aa13.28□□□□□ -0.28
TPM1-206ENST00000358278 OR2H1Q9GZK4 316 aa13.28□□□□□ -0.28
TPM1-206ENST00000358278 SLC24A3Q9HC58 644 aa13.28□□□□□ -0.28
TPM1-206ENST00000358278 PLEK2Q9NYT0 353 aa13.28□□□□□ -0.28
TPM1-206ENST00000358278 GDF2Q9UK05 429 aaPredicted RBP13.28□□□□□ -0.28
TPM1-206ENST00000358278 RPL36Q9Y3U8 105 aaKnown RBP13.28□□□□□ -0.28
TPM1-206ENST00000358278 ROS1P08922 2347 aa13.28□□□□□ -0.28
TPM1-206ENST00000358278 IQCMA0A1B0GVH7 501 aa13.27□□□□□ -0.28
TPM1-206ENST00000358278 M0R1B8 84 aa13.27□□□□□ -0.28
TPM1-206ENST00000358278 RER1O15258 196 aa13.27□□□□□ -0.28
TPM1-206ENST00000358278 DOK2O60496 412 aa13.27□□□□□ -0.28
TPM1-206ENST00000358278 IGKV3-15P01624 115 aa13.27□□□□□ -0.28
TPM1-206ENST00000358278 SBK2P0C263 348 aa13.27□□□□□ -0.28
TPM1-206ENST00000358278 PSKH1P11801 424 aa13.27□□□□□ -0.28
TPM1-206ENST00000358278 CBR1P16152 277 aa13.27□□□□□ -0.28
TPM1-206ENST00000358278 PSG4Q00888 419 aa13.27□□□□□ -0.28
TPM1-206ENST00000358278 EIF2B1Q14232 305 aaKnown RBP13.27□□□□□ -0.28
TPM1-206ENST00000358278 RAB39AQ14964 217 aa13.27□□□□□ -0.28
TPM1-206ENST00000358278 PCK2Q16822 640 aa13.27□□□□□ -0.28
TPM1-206ENST00000358278 TMEM154Q6P9G4 183 aa13.27□□□□□ -0.28
TPM1-206ENST00000358278 CFAP77Q6ZQR2 320 aa13.27□□□□□ -0.28
TPM1-206ENST00000358278 DCXRQ7Z4W1 244 aa13.27□□□□□ -0.28
TPM1-206ENST00000358278 AKR7LQ8NHP1 331 aa13.27□□□□□ -0.28
TPM1-206ENST00000358278 FBLIM1Q8WUP2 373 aa13.27□□□□□ -0.28
TPM1-206ENST00000358278 C1orf198Q9H425 327 aa13.27□□□□□ -0.28
TPM1-206ENST00000358278 NPAP1Q9NZP6 1156 aa13.27□□□□□ -0.28
TPM1-206ENST00000358278 LAMP5Q9UJQ1 280 aa13.27□□□□□ -0.28
TPM1-206ENST00000358278 FBXL3Q9UKT7 428 aa13.27□□□□□ -0.28
TPM1-206ENST00000358278 LRBAP50851 2863 aa13.27□□□□□ -0.29
TPM1-206ENST00000358278 EPXP11678 715 aa13.27□□□□□ -0.29
TPM1-206ENST00000358278 ZNF774Q6NX45 483 aa13.27□□□□□ -0.29
TPM1-206ENST00000358278 SEZ6L2Q6UXD5 910 aa13.27□□□□□ -0.29
TPM1-206ENST00000358278 SLC35F2Q8IXU6 374 aa13.27□□□□□ -0.29
TPM1-206ENST00000358278 OR4F15Q8NGB8 312 aa13.27□□□□□ -0.29
TPM1-206ENST00000358278 OTOSQ8NHW6 89 aa13.27□□□□□ -0.29
TPM1-206ENST00000358278 FAM222BQ8WU58 562 aa13.27□□□□□ -0.29
TPM1-206ENST00000358278 SMAP2Q8WU79 429 aaPredicted RBP13.27□□□□□ -0.29
TPM1-206ENST00000358278 THEM6Q8WUY1 208 aa13.27□□□□□ -0.29
TPM1-206ENST00000358278 YIPF3Q9GZM5 350 aa13.27□□□□□ -0.29
TPM1-206ENST00000358278 DENRO43583 198 aaKnown RBP13.26□□□□□ -0.29
TPM1-206ENST00000358278 FAM20BO75063 409 aa13.26□□□□□ -0.29
TPM1-206ENST00000358278 PTHP01270 115 aa13.26□□□□□ -0.29
TPM1-206ENST00000358278 LYNP07948 512 aa13.26□□□□□ -0.29
TPM1-206ENST00000358278 CELA3BP08861 270 aa13.26□□□□□ -0.29
TPM1-206ENST00000358278 CRYGSP22914 178 aa13.26□□□□□ -0.29
TPM1-206ENST00000358278 HTR5AP47898 357 aa13.26□□□□□ -0.29
TPM1-206ENST00000358278 HCCSP53701 268 aa13.26□□□□□ -0.29
TPM1-206ENST00000358278 MED21Q13503 144 aa13.26□□□□□ -0.29
TPM1-206ENST00000358278 RAB35Q15286 201 aa13.26□□□□□ -0.29
TPM1-206ENST00000358278 TMEM108Q6UXF1 575 aa13.26□□□□□ -0.29
TPM1-206ENST00000358278 VASH1Q7L8A9 365 aaPredicted RBP13.26□□□□□ -0.29
TPM1-206ENST00000358278 CDC20BQ86Y33 519 aa13.26□□□□□ -0.29
TPM1-206ENST00000358278 FAM169BQ8N8A8 192 aa13.26□□□□□ -0.29
TPM1-206ENST00000358278 ZNF454Q8N9F8 522 aa13.26□□□□□ -0.29
TPM1-206ENST00000358278 BPIFB6Q8NFQ5 453 aa13.26□□□□□ -0.29
TPM1-206ENST00000358278 OR10H4Q8NGA5 316 aa13.26□□□□□ -0.29
TPM1-206ENST00000358278 MS4A3Q96HJ5 214 aa13.26□□□□□ -0.29
TPM1-206ENST00000358278 MAP6Q96JE9 813 aa13.26□□□□□ -0.29
TPM1-206ENST00000358278 TBX5Q99593 518 aa13.26□□□□□ -0.29
TPM1-206ENST00000358278 SPOCK3Q9BQ16 436 aa13.26□□□□□ -0.29
TPM1-206ENST00000358278 HDHD2Q9H0R4 259 aa13.26□□□□□ -0.29
TPM1-206ENST00000358278 WNT5BQ9H1J7 359 aa13.26□□□□□ -0.29
TPM1-206ENST00000358278 CRNNQ9UBG3 495 aaPredicted RBP13.26□□□□□ -0.29
TPM1-206ENST00000358278 TMEM14AQ9Y6G1 99 aa13.26□□□□□ -0.29
TPM1-206ENST00000358278 XPNPEP2O43895 674 aa13.25□□□□□ -0.29
TPM1-206ENST00000358278 IGLV1-44P01699 117 aa13.25□□□□□ -0.29
TPM1-206ENST00000358278 SERPINA5P05154 406 aa13.25□□□□□ -0.29
TPM1-206ENST00000358278 CECR9P0C854 216 aa13.25□□□□□ -0.29
TPM1-206ENST00000358278 COX6B1P14854 86 aa13.25□□□□□ -0.29
TPM1-206ENST00000358278 ZNF14P17017 642 aaPredicted RBP13.25□□□□□ -0.29
TPM1-206ENST00000358278 APEX1P27695 318 aaKnown RBP13.25□□□□□ -0.29
TPM1-206ENST00000358278 APLNRP35414 380 aa13.25□□□□□ -0.29
TPM1-206ENST00000358278 RAB40BQ12829 278 aa13.25□□□□□ -0.29
TPM1-206ENST00000358278 C3orf36Q3SXR2 165 aa13.25□□□□□ -0.29
TPM1-206ENST00000358278 KLHL22Q53GT1 634 aa13.25□□□□□ -0.29
TPM1-206ENST00000358278 ELFN2Q5R3F8 820 aa13.25□□□□□ -0.29
TPM1-206ENST00000358278 C6orf141Q5SZD1 244 aa13.25□□□□□ -0.29
TPM1-206ENST00000358278 MYPOPQ86VE0 399 aaPredicted RBP13.25□□□□□ -0.29
TPM1-206ENST00000358278 ZNF584Q8IVC4 421 aa13.25□□□□□ -0.29
TPM1-206ENST00000358278 ST7LQ8TDW4 575 aa13.25□□□□□ -0.29
TPM1-206ENST00000358278 LGALS12Q96DT0 336 aa13.25□□□□□ -0.29
TPM1-206ENST00000358278 PSMG3-AS1Q96PY0 264 aa13.25□□□□□ -0.29
TPM1-206ENST00000358278 MNTQ99583 582 aa13.25□□□□□ -0.29
TPM1-206ENST00000358278 KCNS3Q9BQ31 491 aa13.25□□□□□ -0.29
TPM1-206ENST00000358278 ABHD6Q9BV23 337 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms