RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 C19orf54Q5BKX5 351 aa8.96□□□□□ -0.97
CHD3-202ENST00000358181 TMUB2Q71RG4 321 aa8.96□□□□□ -0.97
CHD3-202ENST00000358181 FIBINQ8TAL6 211 aa8.96□□□□□ -0.97
CHD3-202ENST00000358181 KISS1RQ969F8 398 aaPredicted RBP8.96□□□□□ -0.97
CHD3-202ENST00000358181 SLC46A1Q96NT5 459 aa8.96□□□□□ -0.97
CHD3-202ENST00000358181 WSB2Q9NYS7 404 aaPredicted RBP8.96□□□□□ -0.97
CHD3-202ENST00000358181 OR1A1Q9P1Q5 309 aa8.96□□□□□ -0.97
CHD3-202ENST00000358181 SLC17A4Q9Y2C5 497 aa8.96□□□□□ -0.97
CHD3-202ENST00000358181 GAPDHSO14556 408 aaPredicted RBP8.96□□□□□ -0.97
CHD3-202ENST00000358181 SMAD6O43541 496 aaKnown RBP8.96□□□□□ -0.97
CHD3-202ENST00000358181 LAMP1P11279 417 aa8.96□□□□□ -0.97
CHD3-202ENST00000358181 TGFBR1P36897 503 aa8.96□□□□□ -0.97
CHD3-202ENST00000358181 MS4A2Q01362 244 aa8.96□□□□□ -0.97
CHD3-202ENST00000358181 RNASEKQ6P5S7 137 aaKnown RBP8.96□□□□□ -0.97
CHD3-202ENST00000358181 OR2G3Q8NGZ4 309 aa8.96□□□□□ -0.97
CHD3-202ENST00000358181 TXNIPQ9H3M7 391 aa8.96□□□□□ -0.97
CHD3-202ENST00000358181 EXO1Q9UQ84 846 aaKnown RBP8.96□□□□□ -0.97
CHD3-202ENST00000358181 EPOP01588 193 aa8.96□□□□□ -0.97
CHD3-202ENST00000358181 TAS2R45P59539 299 aa8.96□□□□□ -0.97
CHD3-202ENST00000358181 TAS2R19P59542 299 aa8.96□□□□□ -0.97
CHD3-202ENST00000358181 ACSM1Q08AH1 577 aa8.96□□□□□ -0.97
CHD3-202ENST00000358181 DMRTC1Q5HYR2 192 aa8.96□□□□□ -0.97
CHD3-202ENST00000358181 B3GNTL1Q67FW5 361 aaPredicted RBP8.96□□□□□ -0.97
CHD3-202ENST00000358181 ZNF574Q6ZN55 896 aaPredicted RBP8.96□□□□□ -0.97
CHD3-202ENST00000358181 OR2A1Q8NGT9 310 aa8.96□□□□□ -0.97
CHD3-202ENST00000358181 RDH5Q92781 318 aa8.96□□□□□ -0.97
CHD3-202ENST00000358181 MIEN1Q9BRT3 115 aa8.96□□□□□ -0.97
CHD3-202ENST00000358181 NDRG4Q9ULP0 352 aaKnown RBP8.96□□□□□ -0.97
CHD3-202ENST00000358181 KIR2DS5A0A0G2JLQ3 304 aa8.96□□□□□ -0.98
CHD3-202ENST00000358181 A0A0G2JNG1 304 aa8.96□□□□□ -0.98
CHD3-202ENST00000358181 J3QR89 54 aa8.96□□□□□ -0.98
CHD3-202ENST00000358181 KIR2DS3K7RE56 304 aa8.96□□□□□ -0.98
CHD3-202ENST00000358181 ADAM11O75078 769 aa8.96□□□□□ -0.98
CHD3-202ENST00000358181 OR5AL1P0C617 328 aa8.96□□□□□ -0.98
CHD3-202ENST00000358181 RRASP10301 218 aa8.96□□□□□ -0.98
CHD3-202ENST00000358181 KIR2DS5Q14953 304 aa8.96□□□□□ -0.98
CHD3-202ENST00000358181 MFSD9Q8NBP5 474 aa8.96□□□□□ -0.98
CHD3-202ENST00000358181 OR2AE1Q8NHA4 323 aa8.96□□□□□ -0.98
CHD3-202ENST00000358181 MEGF10Q96KG7 1140 aa8.96□□□□□ -0.98
CHD3-202ENST00000358181 NUBP2Q9Y5Y2 271 aa8.96□□□□□ -0.98
CHD3-202ENST00000358181 ANKUB1A6NFN9 424 aa8.96□□□□□ -0.98
CHD3-202ENST00000358181 PRKYO43930 277 aa8.96□□□□□ -0.98
CHD3-202ENST00000358181 GLAP06280 429 aa8.96□□□□□ -0.98
CHD3-202ENST00000358181 PRTGQ2VWP7 1150 aa8.96□□□□□ -0.98
CHD3-202ENST00000358181 FAHD2BQ6P2I3 314 aaPredicted RBP8.96□□□□□ -0.98
CHD3-202ENST00000358181 UBE3DQ7Z6J8 389 aa8.96□□□□□ -0.98
CHD3-202ENST00000358181 OR6M1Q8NGM8 313 aa8.96□□□□□ -0.98
CHD3-202ENST00000358181 BCL2L2Q92843 193 aaPredicted RBP8.96□□□□□ -0.98
CHD3-202ENST00000358181 FAHD2AQ96GK7 314 aa8.96□□□□□ -0.98
CHD3-202ENST00000358181 KIRREL1Q96J84 757 aa8.96□□□□□ -0.98
CHD3-202ENST00000358181 PTDSS2Q9BVG9 487 aa8.96□□□□□ -0.98
CHD3-202ENST00000358181 GABARAPL1Q9H0R8 117 aa8.96□□□□□ -0.98
CHD3-202ENST00000358181 UCK1Q9HA47 277 aa8.96□□□□□ -0.98
CHD3-202ENST00000358181 LRIT2A6NDA9 550 aa8.96□□□□□ -0.98
CHD3-202ENST00000358181 M0R135 149 aa8.96□□□□□ -0.98
CHD3-202ENST00000358181 PMCHP20382 165 aa8.96□□□□□ -0.98
CHD3-202ENST00000358181 FECHP22830 423 aa8.96□□□□□ -0.98
CHD3-202ENST00000358181 LTB4RQ15722 352 aa8.96□□□□□ -0.98
CHD3-202ENST00000358181 MANEALQ5VSG8 457 aa8.96□□□□□ -0.98
CHD3-202ENST00000358181 OR56B1Q8NGI3 324 aa8.96□□□□□ -0.98
CHD3-202ENST00000358181 NETO1Q8TDF5 533 aa8.96□□□□□ -0.98
CHD3-202ENST00000358181 RPUSD4Q96CM3 377 aaKnown RBP8.96□□□□□ -0.98
CHD3-202ENST00000358181 ZNF799Q96GE5 643 aa8.96□□□□□ -0.98
CHD3-202ENST00000358181 SIAEQ9HAT2 523 aa8.96□□□□□ -0.98
CHD3-202ENST00000358181 TRAV39A0A0B4J263 110 aa8.95□□□□□ -0.98
CHD3-202ENST00000358181 HBE1P02100 147 aa8.95□□□□□ -0.98
CHD3-202ENST00000358181 PF4P02776 101 aa8.95□□□□□ -0.98
CHD3-202ENST00000358181 PPP1CCP36873 323 aaKnown RBP8.95□□□□□ -0.98
CHD3-202ENST00000358181 INSM1Q01101 510 aaPredicted RBP8.95□□□□□ -0.98
CHD3-202ENST00000358181 KIAA0141Q14154 515 aaPredicted RBP8.95□□□□□ -0.98
CHD3-202ENST00000358181 HFEQ30201 348 aa8.95□□□□□ -0.98
CHD3-202ENST00000358181 LCN15Q6UWW0 184 aa8.95□□□□□ -0.98
CHD3-202ENST00000358181 PGBD5Q8N414 524 aa8.95□□□□□ -0.98
CHD3-202ENST00000358181 PARP16Q8N5Y8 322 aa8.95□□□□□ -0.98
CHD3-202ENST00000358181 OR2I1PQ8NGU4 316 aa8.95□□□□□ -0.98
CHD3-202ENST00000358181 OR5R1Q8NH85 324 aa8.95□□□□□ -0.98
CHD3-202ENST00000358181 EMC6Q9BV81 110 aa8.95□□□□□ -0.98
CHD3-202ENST00000358181 TMEM147Q9BVK8 224 aa8.95□□□□□ -0.98
CHD3-202ENST00000358181 TUBA4BQ9H853 241 aa8.95□□□□□ -0.98
CHD3-202ENST00000358181 KCNMB2Q9Y691 235 aa8.95□□□□□ -0.98
CHD3-202ENST00000358181 BLACEA4D250 179 aa8.95□□□□□ -0.98
CHD3-202ENST00000358181 SOCS7O14512 581 aa8.95□□□□□ -0.98
CHD3-202ENST00000358181 LYRM1O43325 122 aa8.95□□□□□ -0.98
CHD3-202ENST00000358181 WDR1O75083 606 aa8.95□□□□□ -0.98
CHD3-202ENST00000358181 CD1DP15813 335 aa8.95□□□□□ -0.98
CHD3-202ENST00000358181 MMP12P39900 470 aa8.95□□□□□ -0.98
CHD3-202ENST00000358181 LYZP61626 148 aa8.95□□□□□ -0.98
CHD3-202ENST00000358181 TMEM88Q6PEY1 159 aa8.95□□□□□ -0.98
CHD3-202ENST00000358181 TBC1D26Q86UD7 250 aa8.95□□□□□ -0.98
CHD3-202ENST00000358181 MS4A15Q8N5U1 240 aa8.95□□□□□ -0.98
CHD3-202ENST00000358181 PTPMT1Q8WUK0 201 aaPredicted RBP8.95□□□□□ -0.98
CHD3-202ENST00000358181 GPR87Q9BY21 358 aa8.95□□□□□ -0.98
CHD3-202ENST00000358181 FBXO34Q9NWN3 711 aa8.95□□□□□ -0.98
CHD3-202ENST00000358181 PLA2G3Q9NZ20 509 aa8.95□□□□□ -0.98
CHD3-202ENST00000358181 SDCBPO00560 298 aaPredicted RBP8.95□□□□□ -0.98
CHD3-202ENST00000358181 SLC25A5P05141 298 aaKnown RBP8.95□□□□□ -0.98
CHD3-202ENST00000358181 HTN3P15516 51 aa8.95□□□□□ -0.98
CHD3-202ENST00000358181 SRP9P49458 86 aaKnown RBP8.95□□□□□ -0.98
CHD3-202ENST00000358181 DHRS13Q6UX07 377 aa8.95□□□□□ -0.98
CHD3-202ENST00000358181 NMNAT3Q96T66 252 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms