RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 ARL11Q969Q4 196 aa6.68□□□□□ -1.34
VPS13A-202ENST00000357409 PFDN5Q99471 154 aa6.68□□□□□ -1.34
VPS13A-202ENST00000357409 NIPAL2Q9H841 368 aa6.68□□□□□ -1.34
VPS13A-202ENST00000357409 IGHV3-72A0A0B4J1Y9 119 aa6.68□□□□□ -1.34
VPS13A-202ENST00000357409 DHRS4L1P0CG22 281 aa6.68□□□□□ -1.34
VPS13A-202ENST00000357409 SLC35A1P78382 337 aa6.68□□□□□ -1.34
VPS13A-202ENST00000357409 OR2F1Q13607 317 aa6.68□□□□□ -1.34
VPS13A-202ENST00000357409 SLC48A1Q6P1K1 146 aa6.68□□□□□ -1.34
VPS13A-202ENST00000357409 IDO2Q6ZQW0 420 aa6.68□□□□□ -1.34
VPS13A-202ENST00000357409 GPR32P1Q8NGA4 272 aa6.68□□□□□ -1.34
VPS13A-202ENST00000357409 DPF1Q92782 380 aa6.68□□□□□ -1.34
VPS13A-202ENST00000357409 SLAMF6Q96DU3 332 aa6.68□□□□□ -1.34
VPS13A-202ENST00000357409 MMP27Q9H306 513 aa6.68□□□□□ -1.34
VPS13A-202ENST00000357409 MBD1Q9UIS9 605 aaPredicted RBP6.68□□□□□ -1.34
VPS13A-202ENST00000357409 ZNF766Q5HY98 468 aa6.68□□□□□ -1.34
VPS13A-202ENST00000357409 AVPI1Q5T686 147 aa6.68□□□□□ -1.34
VPS13A-202ENST00000357409 FAM122CQ6P4D5 195 aa6.68□□□□□ -1.34
VPS13A-202ENST00000357409 PSD2Q9BQI7 771 aa6.68□□□□□ -1.34
VPS13A-202ENST00000357409 TMEM208Q9BTX3 173 aa6.68□□□□□ -1.34
VPS13A-202ENST00000357409 TNFRSF12AQ9NP84 129 aa6.68□□□□□ -1.34
VPS13A-202ENST00000357409 ZNF281Q9Y2X9 895 aa6.68□□□□□ -1.34
VPS13A-202ENST00000357409 SEC14L6B5MCN3 397 aa6.68□□□□□ -1.34
VPS13A-202ENST00000357409 DCTN6O00399 190 aa6.68□□□□□ -1.34
VPS13A-202ENST00000357409 OR7C2O60412 319 aa6.68□□□□□ -1.34
VPS13A-202ENST00000357409 TRA2BP62995 288 aaKnown RBP6.68□□□□□ -1.34
VPS13A-202ENST00000357409 BTN1A1Q13410 526 aa6.68□□□□□ -1.34
VPS13A-202ENST00000357409 OR5I1Q13606 314 aa6.68□□□□□ -1.34
VPS13A-202ENST00000357409 TMEM215Q68D42 235 aa6.68□□□□□ -1.34
VPS13A-202ENST00000357409 KDM4DQ6B0I6 523 aa6.68□□□□□ -1.34
VPS13A-202ENST00000357409 RGS7BPQ6MZT1 257 aaPredicted RBP6.68□□□□□ -1.34
VPS13A-202ENST00000357409 CGB2Q6NT52 195 aa6.68□□□□□ -1.34
VPS13A-202ENST00000357409 BTNL3Q6UXE8 466 aa6.68□□□□□ -1.34
VPS13A-202ENST00000357409 ANKRD13BQ86YJ7 626 aa6.68□□□□□ -1.34
VPS13A-202ENST00000357409 EXTL1Q92935 676 aa6.68□□□□□ -1.34
VPS13A-202ENST00000357409 ANKRD9Q96BM1 317 aaPredicted RBP6.68□□□□□ -1.34
VPS13A-202ENST00000357409 CCDC32Q9BV29 185 aa6.68□□□□□ -1.34
VPS13A-202ENST00000357409 ZNF385DQ9H6B1 395 aa6.68□□□□□ -1.34
VPS13A-202ENST00000357409 KIR3DX1Q9H7L2 352 aa6.68□□□□□ -1.34
VPS13A-202ENST00000357409 C9orf172C9J069 976 aa6.68□□□□□ -1.34
VPS13A-202ENST00000357409 E7ESA3 106 aa6.68□□□□□ -1.34
VPS13A-202ENST00000357409 TMPRSS2O15393 492 aa6.68□□□□□ -1.34
VPS13A-202ENST00000357409 KCNK2O95069 426 aa6.68□□□□□ -1.34
VPS13A-202ENST00000357409 CDK4P11802 303 aa6.68□□□□□ -1.34
VPS13A-202ENST00000357409 SMAD4Q13485 552 aaKnown RBP6.68□□□□□ -1.34
VPS13A-202ENST00000357409 CA13Q8N1Q1 262 aa6.68□□□□□ -1.34
VPS13A-202ENST00000357409 KISS1RQ969F8 398 aaPredicted RBP6.68□□□□□ -1.34
VPS13A-202ENST00000357409 PGAP3Q96FM1 320 aaPredicted RBP6.68□□□□□ -1.34
VPS13A-202ENST00000357409 ZNF419Q96HQ0 510 aaPredicted RBP6.68□□□□□ -1.34
VPS13A-202ENST00000357409 FAM60AQ9NP50 221 aa6.68□□□□□ -1.34
VPS13A-202ENST00000357409 GPR84Q9NQS5 396 aa6.68□□□□□ -1.34
VPS13A-202ENST00000357409 SLCO1B1Q9Y6L6 691 aa6.68□□□□□ -1.34
VPS13A-202ENST00000357409 GCAP28676 217 aa6.68□□□□□ -1.34
VPS13A-202ENST00000357409 GPM6AP51674 278 aa6.68□□□□□ -1.34
VPS13A-202ENST00000357409 ACSM1Q08AH1 577 aa6.68□□□□□ -1.34
VPS13A-202ENST00000357409 CLN3Q13286 438 aa6.68□□□□□ -1.34
VPS13A-202ENST00000357409 SLC35F3Q8IY50 421 aa6.68□□□□□ -1.34
VPS13A-202ENST00000357409 LGALS14Q8TCE9 139 aa6.68□□□□□ -1.34
VPS13A-202ENST00000357409 ISG20Q96AZ6 181 aaKnown RBP6.68□□□□□ -1.34
VPS13A-202ENST00000357409 AKR1E2Q96JD6 320 aa6.68□□□□□ -1.34
VPS13A-202ENST00000357409 TRIB3Q96RU7 358 aa6.68□□□□□ -1.34
VPS13A-202ENST00000357409 NID2Q14112 1375 aa6.68□□□□□ -1.34
VPS13A-202ENST00000357409 ACP2P11117 423 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 ZNF74Q16587 644 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 ZNF793Q6ZN11 406 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 OR10J5Q8NHC4 309 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 MED1Q15648 1581 aaPredicted RBP6.67□□□□□ -1.34
VPS13A-202ENST00000357409 A0A1W2PS29 197 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 SLC22A20A6NK97 555 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 MT-CO3P00414 261 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 GALNSP34059 522 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 GZMKP49863 264 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 PCBD1P61457 104 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 Q6ZRG5 221 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 SLC25A26Q70HW3 274 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 OR14A16Q8NHC5 309 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 C16orf52Q8NHV5 167 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 LRFN3Q9BTN0 628 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 TREX1Q9NSU2 369 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 OR1A1Q9P1Q5 309 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 NPC1O15118 1278 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 CEACAM5P06731 702 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 AADACP22760 399 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 G0S2P27469 103 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 FOXF1Q12946 379 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 GGTLC2Q14390 218 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 LPCAT3Q6P1A2 487 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 PARP16Q8N5Y8 322 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 ZNF2Q9BSG1 426 aaPredicted RBP6.67□□□□□ -1.34
VPS13A-202ENST00000357409 NUDT9Q9BW91 350 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 KCNK15Q9H427 330 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 BIN3Q9NQY0 253 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 DAPP1Q9UN19 280 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 ARHGAP33O14559 1287 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 GEMIN2O14893 280 aaKnown RBP6.67□□□□□ -1.34
VPS13A-202ENST00000357409 IGKV3-20P01619 116 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 FZD5Q13467 585 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 MS4A15Q8N5U1 240 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 TPRX1Q8N7U7 411 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 SFT2D1Q8WV19 159 aa6.67□□□□□ -1.34
VPS13A-202ENST00000357409 NUDCD2Q8WVJ2 157 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms