RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 SSBP1Q04837 148 aaKnown RBP5.91□□□□□ -1.46
UPF2-201ENST00000356352 DUSP8Q13202 625 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 ZNF77Q15935 545 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 PCK2Q16822 640 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 AGBL4Q5VU57 503 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 LSMEM2Q8N112 164 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 EXD3Q8N9H8 876 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 HSD17B11Q8NBQ5 300 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 KLHDC9Q8NEP7 349 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 OR5B3Q8NH48 314 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 OR51F2Q8NH61 342 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 RBPMSQ93062 196 aaKnown RBP5.91□□□□□ -1.46
UPF2-201ENST00000356352 TSLPQ969D9 159 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 MRGPRX4Q96LA9 322 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 ZNF416Q9BWM5 594 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 HES7Q9BYE0 225 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 NMES1Q9C002 83 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 GPR173Q9NS66 373 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 DAPP1Q9UN19 280 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 OR2A25A4D2G3 310 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 POM121CA8CG34 1229 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 FAM166BA8MTA8 275 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 PPP5D1E7EU14 171 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 J3QR89 54 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 FBP1P09467 338 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 TEAD1P28347 426 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 PPICP45877 212 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 FABP6P51161 128 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 ADPRHP54922 357 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 OR10A3P58181 314 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 SMAD4Q13485 552 aaKnown RBP5.91□□□□□ -1.46
UPF2-201ENST00000356352 RPL7L1Q6DKI1 246 aaKnown RBP5.91□□□□□ -1.46
UPF2-201ENST00000356352 LILRA2Q8N149 483 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 OR10P1Q8NGE3 313 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 ZNRF4Q8WWF5 429 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 EDARADDQ8WWZ3 215 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 MS4A6EQ96DS6 147 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 ZC3HAV1LQ96H79 300 aaKnown RBP5.91□□□□□ -1.46
UPF2-201ENST00000356352 PLEKHA2Q9HB19 425 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 SLAMF8Q9P0V8 285 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 AK3Q9UIJ7 227 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 GAB2Q9UQC2 676 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 GOLT1BQ9Y3E0 138 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 A0A087WV62 115 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 STMND1H3BQB6 276 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 ADAM12O43184 909 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 LY86O95711 162 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 M6PRP20645 277 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 RAB1AP62820 205 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 GNB2P62879 340 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 PYCR3Q53H96 274 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 COX20Q5RI15 118 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 SYS1Q8N2H4 156 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 PELI3Q8N2H9 469 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 TMEM102Q8N9M5 508 aaPredicted RBP5.91□□□□□ -1.46
UPF2-201ENST00000356352 ZNF485Q8NCK3 441 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 ZNF740Q8NDX6 193 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 OR4Q3Q8NH05 313 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 SPPL3Q8TCT6 385 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 SFT2D1Q8WV19 159 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 SLC25A46Q96AG3 418 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 ELF4Q99607 663 aaPredicted RBP5.91□□□□□ -1.46
UPF2-201ENST00000356352 TAS2R4Q9NYW5 299 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 FAM96BQ9Y3D0 163 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 HRH3Q9Y5N1 445 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 LINC01553A4QN01 128 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 ARRDC5A6NEK1 342 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 M0R082 166 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 GJB3O75712 270 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 QDPRP09417 244 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 PIGAP37287 484 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 OR2A2Q6IF42 318 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 PAQR9Q6ZVX9 377 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 CPEB2Q7Z5Q1 589 aaKnown RBP5.91□□□□□ -1.46
UPF2-201ENST00000356352 ZDHHC23Q8IYP9 409 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 OR8U1Q8NH10 309 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 PFN4Q8NHR9 129 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 GPX8Q8TED1 209 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 MENTQ9BUN1 341 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 COMMD5Q9GZQ3 224 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 C11orf54Q9H0W9 315 aaPredicted RBP5.91□□□□□ -1.46
UPF2-201ENST00000356352 SLC25A32Q9H2D1 315 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 UBE2ZQ9H832 354 aaPredicted RBP5.91□□□□□ -1.46
UPF2-201ENST00000356352 ZNF346Q9UL40 294 aaKnown RBP5.91□□□□□ -1.46
UPF2-201ENST00000356352 CCL26Q9Y258 94 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 SLC17A4Q9Y2C5 497 aa5.91□□□□□ -1.46
UPF2-201ENST00000356352 DLG5Q8TDM6 1919 aa5.9□□□□□ -1.46
UPF2-201ENST00000356352 M0R1B8 84 aa5.9□□□□□ -1.46
UPF2-201ENST00000356352 MAGEB4O15481 346 aaPredicted RBP5.9□□□□□ -1.46
UPF2-201ENST00000356352 NRASP01111 189 aa5.9□□□□□ -1.46
UPF2-201ENST00000356352 HCCSP53701 268 aa5.9□□□□□ -1.46
UPF2-201ENST00000356352 ELLP55199 621 aaPredicted RBP5.9□□□□□ -1.46
UPF2-201ENST00000356352 ENDOGQ14249 297 aaKnown RBP5.9□□□□□ -1.46
UPF2-201ENST00000356352 FZD2Q14332 565 aa5.9□□□□□ -1.46
UPF2-201ENST00000356352 FCN2Q15485 313 aa5.9□□□□□ -1.46
UPF2-201ENST00000356352 PRTGQ2VWP7 1150 aa5.9□□□□□ -1.46
UPF2-201ENST00000356352 ZNF718Q3SXZ3 478 aa5.9□□□□□ -1.46
UPF2-201ENST00000356352 LAIR1Q6GTX8 287 aa5.9□□□□□ -1.46
UPF2-201ENST00000356352 Q6ZPB1 254 aaPredicted RBP5.9□□□□□ -1.46
UPF2-201ENST00000356352 ADGRF3Q8IZF5 1079 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms