RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 GTF3AQ92664 365 aaKnown RBP9.05□□□□□ -0.96
CAPN3-204ENST00000356316 FAM162AQ96A26 154 aa9.05□□□□□ -0.96
CAPN3-204ENST00000356316 COG8Q96MW5 612 aa9.05□□□□□ -0.96
CAPN3-204ENST00000356316 SUCNR1Q9BXA5 334 aa9.05□□□□□ -0.96
CAPN3-204ENST00000356316 WNT5BQ9H1J7 359 aa9.05□□□□□ -0.96
CAPN3-204ENST00000356316 RERGLQ9H628 205 aa9.05□□□□□ -0.96
CAPN3-204ENST00000356316 EFCAB1Q9HAE3 211 aa9.05□□□□□ -0.96
CAPN3-204ENST00000356316 MSL2Q9HCI7 577 aa9.05□□□□□ -0.96
CAPN3-204ENST00000356316 MAN2C1Q9NTJ4 1040 aa9.05□□□□□ -0.96
CAPN3-204ENST00000356316 SNX13Q9Y5W8 968 aa9.05□□□□□ -0.96
CAPN3-204ENST00000356316 CACNG2Q9Y698 323 aa9.05□□□□□ -0.96
CAPN3-204ENST00000356316 J3KTA2 159 aa9.04□□□□□ -0.96
CAPN3-204ENST00000356316 SURF4O15260 269 aa9.04□□□□□ -0.96
CAPN3-204ENST00000356316 ICMTO60725 284 aa9.04□□□□□ -0.96
CAPN3-204ENST00000356316 FOXH1O75593 365 aa9.04□□□□□ -0.96
CAPN3-204ENST00000356316 UBOX5O94941 541 aa9.04□□□□□ -0.96
CAPN3-204ENST00000356316 CD14P08571 375 aa9.04□□□□□ -0.96
CAPN3-204ENST00000356316 SBK2P0C263 348 aa9.04□□□□□ -0.96
CAPN3-204ENST00000356316 COX5BP10606 129 aa9.04□□□□□ -0.96
CAPN3-204ENST00000356316 HTR5AP47898 357 aa9.04□□□□□ -0.96
CAPN3-204ENST00000356316 LCN2P80188 198 aa9.04□□□□□ -0.96
CAPN3-204ENST00000356316 PSG7Q13046 419 aa9.04□□□□□ -0.96
CAPN3-204ENST00000356316 HSP90B2PQ58FF3 399 aa9.04□□□□□ -0.96
CAPN3-204ENST00000356316 MTX3Q5HYI7 312 aa9.04□□□□□ -0.96
CAPN3-204ENST00000356316 TBPL2Q6SJ96 375 aa9.04□□□□□ -0.96
CAPN3-204ENST00000356316 RBMS3Q6XE24 437 aaKnown RBP9.04□□□□□ -0.96
CAPN3-204ENST00000356316 FOXL2NBQ6ZUU3 175 aa9.04□□□□□ -0.96
CAPN3-204ENST00000356316 RFPL4BQ6ZWI9 263 aa9.04□□□□□ -0.96
CAPN3-204ENST00000356316 TMPRSS11FQ6ZWK6 438 aa9.04□□□□□ -0.96
CAPN3-204ENST00000356316 USP43Q70EL4 1123 aa9.04□□□□□ -0.96
CAPN3-204ENST00000356316 ZNF771Q7L3S4 317 aaPredicted RBP9.04□□□□□ -0.96
CAPN3-204ENST00000356316 SLC15A3Q8IY34 581 aa9.04□□□□□ -0.96
CAPN3-204ENST00000356316 KLHL36Q8N4N3 616 aa9.04□□□□□ -0.96
CAPN3-204ENST00000356316 C3orf56Q8N813 242 aa9.04□□□□□ -0.96
CAPN3-204ENST00000356316 LRRC75AQ8NAA5 344 aa9.04□□□□□ -0.96
CAPN3-204ENST00000356316 ZNF511Q8NB15 262 aa9.04□□□□□ -0.96
CAPN3-204ENST00000356316 OR2Z1Q8NG97 314 aa9.04□□□□□ -0.96
CAPN3-204ENST00000356316 FAM216AQ8WUB2 273 aa9.04□□□□□ -0.96
CAPN3-204ENST00000356316 ZNF570Q96NI8 536 aa9.04□□□□□ -0.96
CAPN3-204ENST00000356316 DCLRE1CQ96SD1 692 aaKnown RBP9.04□□□□□ -0.96
CAPN3-204ENST00000356316 RBM4Q9BWF3 364 aaKnown RBP9.04□□□□□ -0.96
CAPN3-204ENST00000356316 EMC7Q9NPA0 242 aa9.04□□□□□ -0.96
CAPN3-204ENST00000356316 KRCC1Q9NPI7 259 aaPredicted RBP9.04□□□□□ -0.96
CAPN3-204ENST00000356316 G6PC2Q9NQR9 355 aa9.04□□□□□ -0.96
CAPN3-204ENST00000356316 POLE4Q9NR33 117 aa9.04□□□□□ -0.96
CAPN3-204ENST00000356316 TBCCD1Q9NVR7 557 aa9.04□□□□□ -0.96
CAPN3-204ENST00000356316 CMTM6Q9NX76 183 aa9.04□□□□□ -0.96
CAPN3-204ENST00000356316 ARMCX1Q9P291 453 aa9.04□□□□□ -0.96
CAPN3-204ENST00000356316 KLHL21Q9UJP4 597 aa9.04□□□□□ -0.96
CAPN3-204ENST00000356316 TMEM5Q9Y2B1 443 aa9.04□□□□□ -0.96
CAPN3-204ENST00000356316 NPTNQ9Y639 398 aa9.04□□□□□ -0.96
CAPN3-204ENST00000356316 ANK2Q01484 3957 aa9.04□□□□□ -0.96
CAPN3-204ENST00000356316 A0A087WUU8 490 aa9.03□□□□□ -0.96
CAPN3-204ENST00000356316 PRSS37A4D1T9 235 aa9.03□□□□□ -0.96
CAPN3-204ENST00000356316 ZSCAN5BA6NJL1 495 aa9.03□□□□□ -0.96
CAPN3-204ENST00000356316 H7C1C5 153 aa9.03□□□□□ -0.96
CAPN3-204ENST00000356316 FFAR1O14842 300 aa9.03□□□□□ -0.96
CAPN3-204ENST00000356316 SGCEO43556 437 aa9.03□□□□□ -0.96
CAPN3-204ENST00000356316 DOK2O60496 412 aa9.03□□□□□ -0.96
CAPN3-204ENST00000356316 DEAF1O75398 565 aaPredicted RBP9.03□□□□□ -0.96
CAPN3-204ENST00000356316 SASH3O75995 380 aa9.03□□□□□ -0.96
CAPN3-204ENST00000356316 SERPINA1P01009 418 aa9.03□□□□□ -0.96
CAPN3-204ENST00000356316 CD55P08174 381 aa9.03□□□□□ -0.96
CAPN3-204ENST00000356316 ADH4P08319 380 aa9.03□□□□□ -0.96
CAPN3-204ENST00000356316 COX4I1P13073 169 aa9.03□□□□□ -0.96
CAPN3-204ENST00000356316 GPR4P46093 362 aa9.03□□□□□ -0.96
CAPN3-204ENST00000356316 LIMS1P48059 325 aa9.03□□□□□ -0.96
CAPN3-204ENST00000356316 HILS1P60008 231 aa9.03□□□□□ -0.96
CAPN3-204ENST00000356316 LCN6P62502 163 aa9.03□□□□□ -0.96
CAPN3-204ENST00000356316 GUCY1A3Q02108 690 aa9.03□□□□□ -0.96
CAPN3-204ENST00000356316 CDK5R2Q13319 367 aa9.03□□□□□ -0.96
CAPN3-204ENST00000356316 ENDOGQ14249 297 aaKnown RBP9.03□□□□□ -0.96
CAPN3-204ENST00000356316 KRT72Q14CN4 511 aa9.03□□□□□ -0.96
CAPN3-204ENST00000356316 LINC01559Q495D7 138 aa9.03□□□□□ -0.96
CAPN3-204ENST00000356316 CGB2Q6NT52 195 aa9.03□□□□□ -0.96
CAPN3-204ENST00000356316 C1orf94Q6P1W5 598 aa9.03□□□□□ -0.96
CAPN3-204ENST00000356316 CBLL1Q75N03 491 aa9.03□□□□□ -0.96
CAPN3-204ENST00000356316 C1QL2Q7Z5L3 287 aa9.03□□□□□ -0.96
CAPN3-204ENST00000356316 GLB1L2Q8IW92 636 aa9.03□□□□□ -0.96
CAPN3-204ENST00000356316 OR5L1Q8NGL2 311 aa9.03□□□□□ -0.96
CAPN3-204ENST00000356316 PTP4A1Q93096 173 aa9.03□□□□□ -0.96
CAPN3-204ENST00000356316 CMBLQ96DG6 245 aa9.03□□□□□ -0.96
CAPN3-204ENST00000356316 HSH2DQ96JZ2 352 aa9.03□□□□□ -0.96
CAPN3-204ENST00000356316 Q96M85 177 aa9.03□□□□□ -0.96
CAPN3-204ENST00000356316 KCTD14Q9BQ13 255 aaPredicted RBP9.03□□□□□ -0.96
CAPN3-204ENST00000356316 TMPRSS13Q9BYE2 586 aa9.03□□□□□ -0.96
CAPN3-204ENST00000356316 ANKRD19PQ9H560 264 aa9.03□□□□□ -0.96
CAPN3-204ENST00000356316 NMNAT1Q9HAN9 279 aaPredicted RBP9.03□□□□□ -0.96
CAPN3-204ENST00000356316 PLEK2Q9NYT0 353 aa9.03□□□□□ -0.96
CAPN3-204ENST00000356316 RPS6KA6Q9UK32 745 aa9.03□□□□□ -0.96
CAPN3-204ENST00000356316 AURKCQ9UQB9 309 aa9.03□□□□□ -0.96
CAPN3-204ENST00000356316 ADAM18Q9Y3Q7 739 aa9.03□□□□□ -0.96
CAPN3-204ENST00000356316 DYSFO75923 2080 aa9.03□□□□□ -0.96
CAPN3-204ENST00000356316 TEX13CA0A0J9YWL9 993 aa9.02□□□□□ -0.97
CAPN3-204ENST00000356316 SLC16A7O60669 478 aa9.02□□□□□ -0.97
CAPN3-204ENST00000356316 KHDRBS3O75525 346 aaKnown RBP9.02□□□□□ -0.97
CAPN3-204ENST00000356316 NDUFB2O95178 105 aa9.02□□□□□ -0.97
CAPN3-204ENST00000356316 AVPP01185 164 aa9.02□□□□□ -0.97
CAPN3-204ENST00000356316 H1F0P07305 194 aaKnown RBP9.02□□□□□ -0.97
CAPN3-204ENST00000356316 ADRA2CP18825 462 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms