RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 GON4LQ3T8J9 2241 aa6.9□□□□□ -1.31
BRCA1-201ENST00000352993 IGKV1-8A0A0C4DH67 115 aa6.9□□□□□ -1.31
BRCA1-201ENST00000352993 MED19A0JLT2 244 aaPredicted RBP6.9□□□□□ -1.31
BRCA1-201ENST00000352993 TMEM212A6NML5 194 aa6.9□□□□□ -1.31
BRCA1-201ENST00000352993 MFNGO00587 321 aa6.9□□□□□ -1.31
BRCA1-201ENST00000352993 CD1AP06126 327 aa6.9□□□□□ -1.31
BRCA1-201ENST00000352993 FAM157CP0CG43 387 aa6.9□□□□□ -1.31
BRCA1-201ENST00000352993 HRH1P35367 487 aa6.9□□□□□ -1.31
BRCA1-201ENST00000352993 CDKN2AP42771 156 aaKnown RBP6.9□□□□□ -1.31
BRCA1-201ENST00000352993 EMDP50402 254 aa6.9□□□□□ -1.31
BRCA1-201ENST00000352993 ITPRIPL2Q3MIP1 535 aa6.9□□□□□ -1.31
BRCA1-201ENST00000352993 MOGAT2Q3SYC2 334 aa6.9□□□□□ -1.31
BRCA1-201ENST00000352993 PYY3Q5JQD4 70 aa6.9□□□□□ -1.31
BRCA1-201ENST00000352993 EEF1A1P5Q5VTE0 462 aa6.9□□□□□ -1.31
BRCA1-201ENST00000352993 TMEM215Q68D42 235 aa6.9□□□□□ -1.31
BRCA1-201ENST00000352993 SLC16A9Q7RTY1 509 aa6.9□□□□□ -1.31
BRCA1-201ENST00000352993 SLC25A42Q86VD7 318 aa6.9□□□□□ -1.31
BRCA1-201ENST00000352993 FJX1Q86VR8 437 aa6.9□□□□□ -1.31
BRCA1-201ENST00000352993 GATSQ8NAP1 163 aa6.9□□□□□ -1.31
BRCA1-201ENST00000352993 UBAC2Q8NBM4 344 aa6.9□□□□□ -1.31
BRCA1-201ENST00000352993 BHLHE23Q8NDY6 225 aa6.9□□□□□ -1.31
BRCA1-201ENST00000352993 ZNF563Q8TA94 476 aa6.9□□□□□ -1.31
BRCA1-201ENST00000352993 JSRP1Q96MG2 331 aaPredicted RBP6.9□□□□□ -1.31
BRCA1-201ENST00000352993 TRIM2Q9C040 744 aa6.9□□□□□ -1.31
BRCA1-201ENST00000352993 ELOVL3Q9HB03 270 aa6.9□□□□□ -1.31
BRCA1-201ENST00000352993 IL21Q9HBE4 155 aa6.9□□□□□ -1.31
BRCA1-201ENST00000352993 KCNJ16Q9NPI9 418 aa6.9□□□□□ -1.31
BRCA1-201ENST00000352993 OR5AC2Q9NZP5 309 aa6.9□□□□□ -1.31
BRCA1-201ENST00000352993 KLK13Q9UKR3 277 aa6.9□□□□□ -1.31
BRCA1-201ENST00000352993 ICAM5Q9UMF0 924 aa6.9□□□□□ -1.31
BRCA1-201ENST00000352993 ENTPD2Q9Y5L3 495 aa6.9□□□□□ -1.31
BRCA1-201ENST00000352993 TRBV23OR9-2A0A075B6M9 112 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 A0A0B4J2E0 115 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 A0A1B0GX12 115 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 A0A1W2PPC1 479 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 BTBD17A6NE02 478 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 OR4C45A6NMZ5 311 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 UMAD1C9J7I0 102 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 SLC17A2O00624 439 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 CSNK1EP49674 416 aaKnown RBP6.89□□□□□ -1.31
BRCA1-201ENST00000352993 SULT1A1P50225 295 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 RAB28P51157 221 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 OR2A2Q6IF42 318 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 DPY19L2P2Q6ZN68 376 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 BEND4Q6ZU67 534 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 DMRTC2Q8IXT2 367 aaPredicted RBP6.89□□□□□ -1.31
BRCA1-201ENST00000352993 CSNK1A1LQ8N752 337 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 OR51F2Q8NH61 342 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 SOCS4Q8WXH5 440 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 IRF7Q92985 503 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 SLC46A2Q9BY10 475 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 WDR76Q9H967 626 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 TMEM100Q9NV29 134 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 TAS2R4Q9NYW5 299 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 CACFD1Q9UGQ2 172 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 GPR34Q9UPC5 381 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.89□□□□□ -1.31
BRCA1-201ENST00000352993 FBXO7Q9Y3I1 522 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 WNT6Q9Y6F9 365 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 MTCL1Q9Y4B5 1905 aaKnown RBP6.89□□□□□ -1.31
BRCA1-201ENST00000352993 MYO7AQ13402 2215 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 A0A087X0M5 115 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 A0A1B0GX30 115 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 NPIPB9F8W1W9 429 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 TSTD3H0UI37 97 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 VEGFDO43915 354 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 TMEM127O75204 238 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 UPK3AO75631 287 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 ABLIM3O94929 683 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 OR2C1O95371 312 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 TXNDC12O95881 172 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 SCGB1D2O95969 90 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 PPICP45877 212 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 FLT3LGP49771 235 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 RIDAP52758 137 aaKnown RBP6.89□□□□□ -1.31
BRCA1-201ENST00000352993 GGTLC2Q14390 218 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 SLC35D3Q5M8T2 416 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 LCN10Q6JVE6 187 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 FBXO46Q6PJ61 603 aaPredicted RBP6.89□□□□□ -1.31
BRCA1-201ENST00000352993 HIST2H3AQ71DI3 136 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 ZNF679Q8IYX0 411 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 MFSD8Q8NHS3 518 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 GTF3AQ92664 365 aaKnown RBP6.89□□□□□ -1.31
BRCA1-201ENST00000352993 SLC25A44Q96H78 314 aaPredicted RBP6.89□□□□□ -1.31
BRCA1-201ENST00000352993 INSM2Q96T92 566 aaPredicted RBP6.89□□□□□ -1.31
BRCA1-201ENST00000352993 GRHPRQ9UBQ7 328 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 F8VVB4 439 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 F8VWA3 439 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 LYPD3O95274 346 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 SPARCP09486 303 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 CPMP14384 443 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 TACR3P29371 465 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 HTR5AP47898 357 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 NPY4RP50391 375 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 CASP6P55212 293 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 NAAAQ02083 359 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 RASGEF1BQ0VAM2 473 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 CHAF1BQ13112 559 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 WDR38Q5JTN6 314 aa6.89□□□□□ -1.31
BRCA1-201ENST00000352993 KIRREL2Q6UWL6 708 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms