RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 ZNF529Q6P280 563 aa13.38□□□□□ -0.27
NUP50-201ENST00000347635 TMEM71Q6P5X7 295 aa13.38□□□□□ -0.27
NUP50-201ENST00000347635 RHOUQ7L0Q8 258 aa13.38□□□□□ -0.27
NUP50-201ENST00000347635 PATE1Q8WXA2 126 aa13.38□□□□□ -0.27
NUP50-201ENST00000347635 SDHCQ99643 169 aaPredicted RBP13.38□□□□□ -0.27
NUP50-201ENST00000347635 CHRDQ9H2X0 955 aa13.38□□□□□ -0.27
NUP50-201ENST00000347635 C1orf123Q9NWV4 160 aa13.38□□□□□ -0.27
NUP50-201ENST00000347635 PDCD11Q14690 1871 aaKnown RBP13.38□□□□□ -0.27
NUP50-201ENST00000347635 A0A087WUJ7 227 aa13.38□□□□□ -0.27
NUP50-201ENST00000347635 TTLL8A6PVC2 850 aa13.38□□□□□ -0.27
NUP50-201ENST00000347635 FLI1Q01543 452 aaPredicted RBP13.38□□□□□ -0.27
NUP50-201ENST00000347635 EBPQ15125 230 aaKnown RBP13.38□□□□□ -0.27
NUP50-201ENST00000347635 NKAIN1Q4KMZ8 207 aa13.38□□□□□ -0.27
NUP50-201ENST00000347635 FAM209AQ5JX71 171 aa13.38□□□□□ -0.27
NUP50-201ENST00000347635 ARIH2OSQ8N7S6 290 aa13.38□□□□□ -0.27
NUP50-201ENST00000347635 TCEAL3Q969E4 200 aa13.38□□□□□ -0.27
NUP50-201ENST00000347635 MCTS1Q9ULC4 181 aaKnown RBP13.38□□□□□ -0.27
NUP50-201ENST00000347635 NUP214P35658 2090 aaPredicted RBP13.38□□□□□ -0.27
NUP50-201ENST00000347635 LINC00862A6NCI5 91 aa13.38□□□□□ -0.27
NUP50-201ENST00000347635 EIF4E2O60573 245 aaKnown RBP13.38□□□□□ -0.27
NUP50-201ENST00000347635 CDONQ4KMG0 1287 aa13.38□□□□□ -0.27
NUP50-201ENST00000347635 OR4N2Q8NGD1 307 aa13.38□□□□□ -0.27
NUP50-201ENST00000347635 FTCDNL1E5RQL4 147 aa13.38□□□□□ -0.27
NUP50-201ENST00000347635 K7EQS6 105 aa13.38□□□□□ -0.27
NUP50-201ENST00000347635 GREM1O60565 184 aa13.38□□□□□ -0.27
NUP50-201ENST00000347635 SULT1A3P0DMM9 295 aa13.38□□□□□ -0.27
NUP50-201ENST00000347635 SULT1A4P0DMN0 295 aa13.38□□□□□ -0.27
NUP50-201ENST00000347635 ZNF16P17020 682 aaPredicted RBP13.38□□□□□ -0.27
NUP50-201ENST00000347635 CHATP28329 748 aa13.38□□□□□ -0.27
NUP50-201ENST00000347635 CAV2P51636 162 aa13.38□□□□□ -0.27
NUP50-201ENST00000347635 GUCA2AQ02747 115 aa13.38□□□□□ -0.27
NUP50-201ENST00000347635 MRM1Q6IN84 353 aaKnown RBP13.38□□□□□ -0.27
NUP50-201ENST00000347635 FAM122BQ7Z309 247 aa13.38□□□□□ -0.27
NUP50-201ENST00000347635 ABI3BPQ7Z7G0 1075 aa13.38□□□□□ -0.27
NUP50-201ENST00000347635 ST8SIA2Q92186 375 aa13.38□□□□□ -0.27
NUP50-201ENST00000347635 SLCO1C1Q9NYB5 712 aa13.38□□□□□ -0.27
NUP50-201ENST00000347635 HAO2Q9NYQ3 351 aa13.38□□□□□ -0.27
NUP50-201ENST00000347635 DHCR7Q9UBM7 475 aaKnown RBP13.38□□□□□ -0.27
NUP50-201ENST00000347635 KCNG2Q9UJ96 466 aa13.38□□□□□ -0.27
NUP50-201ENST00000347635 FOXK1P85037 733 aa13.37□□□□□ -0.27
NUP50-201ENST00000347635 TRA2AQ13595 282 aaKnown RBP eCLIP13.37□□□□□ -0.27
NUP50-201ENST00000347635 HLXQ14774 488 aaPredicted RBP13.37□□□□□ -0.27
NUP50-201ENST00000347635 SLC17A1Q14916 467 aa13.37□□□□□ -0.27
NUP50-201ENST00000347635 SLC36A2Q495M3 483 aa13.37□□□□□ -0.27
NUP50-201ENST00000347635 C6orf15Q6UXA7 325 aaPredicted RBP13.37□□□□□ -0.27
NUP50-201ENST00000347635 WDR89Q96FK6 387 aaPredicted RBP13.37□□□□□ -0.27
NUP50-201ENST00000347635 PFDN5Q99471 154 aa13.37□□□□□ -0.27
NUP50-201ENST00000347635 DNAJB12Q9NXW2 375 aaKnown RBP13.37□□□□□ -0.27
NUP50-201ENST00000347635 MYO7AQ13402 2215 aa13.37□□□□□ -0.27
NUP50-201ENST00000347635 IGHV1OR15-9A0A0B4J2B8 117 aa13.37□□□□□ -0.27
NUP50-201ENST00000347635 A0A1W2PS29 197 aa13.37□□□□□ -0.27
NUP50-201ENST00000347635 TMEM235A6NFC5 223 aa13.37□□□□□ -0.27
NUP50-201ENST00000347635 SULT2B1O00204 365 aa13.37□□□□□ -0.27
NUP50-201ENST00000347635 NKX2-2O95096 273 aa13.37□□□□□ -0.27
NUP50-201ENST00000347635 OPN1LWP04000 364 aa13.37□□□□□ -0.27
NUP50-201ENST00000347635 SLC26A5P58743 744 aa13.37□□□□□ -0.27
NUP50-201ENST00000347635 SIGLEC14Q08ET2 396 aa13.37□□□□□ -0.27
NUP50-201ENST00000347635 ACKR1Q16570 336 aa13.37□□□□□ -0.27
NUP50-201ENST00000347635 ZNF626Q68DY1 528 aa13.37□□□□□ -0.27
NUP50-201ENST00000347635 ZNF687Q8N1G0 1237 aa13.37□□□□□ -0.27
NUP50-201ENST00000347635 EXOSC3Q9NQT5 275 aaKnown RBP13.37□□□□□ -0.27
NUP50-201ENST00000347635 FAM86C1Q9NVL1 165 aa13.37□□□□□ -0.27
NUP50-201ENST00000347635 FBXO34Q9NWN3 711 aa13.37□□□□□ -0.27
NUP50-201ENST00000347635 LUZP4Q9P127 313 aa13.37□□□□□ -0.27
NUP50-201ENST00000347635 OR5V1Q9UGF6 321 aa13.37□□□□□ -0.27
NUP50-201ENST00000347635 A0A1W2PPV9 198 aa13.37□□□□□ -0.27
NUP50-201ENST00000347635 PIAS2O75928 621 aa13.37□□□□□ -0.27
NUP50-201ENST00000347635 ZFPL1O95159 310 aa13.37□□□□□ -0.27
NUP50-201ENST00000347635 NME2P22392 152 aa13.37□□□□□ -0.27
NUP50-201ENST00000347635 BIDP55957 195 aa13.37□□□□□ -0.27
NUP50-201ENST00000347635 BTG2P78543 158 aa13.37□□□□□ -0.27
NUP50-201ENST00000347635 MFGE8Q08431 387 aaPredicted RBP13.37□□□□□ -0.27
NUP50-201ENST00000347635 GPR137Q96N19 417 aa13.37□□□□□ -0.27
NUP50-201ENST00000347635 TCEAL7Q9BRU2 100 aa13.37□□□□□ -0.27
NUP50-201ENST00000347635 SLC22A13Q9Y226 551 aa13.37□□□□□ -0.27
NUP50-201ENST00000347635 CSAG2Q9Y5P2 127 aa13.37□□□□□ -0.27
NUP50-201ENST00000347635 NYNRINQ9P2P1 1898 aaKnown RBP13.37□□□□□ -0.27
NUP50-201ENST00000347635 OR6C76A6NM76 312 aa13.37□□□□□ -0.27
NUP50-201ENST00000347635 NPY4RP50391 375 aa13.37□□□□□ -0.27
NUP50-201ENST00000347635 BORCS8Q96FH0 119 aa13.37□□□□□ -0.27
NUP50-201ENST00000347635 SCMH1Q96GD3 660 aa13.37□□□□□ -0.27
NUP50-201ENST00000347635 UTP23Q9BRU9 249 aaKnown RBP13.37□□□□□ -0.27
NUP50-201ENST00000347635 LRRC61Q9BV99 259 aa13.37□□□□□ -0.27
NUP50-201ENST00000347635 LAT2Q9GZY6 243 aa13.37□□□□□ -0.27
NUP50-201ENST00000347635 ANKRD20A5PA0PJZ0 165 aa13.36□□□□□ -0.27
NUP50-201ENST00000347635 IMPA2O14732 288 aa13.36□□□□□ -0.27
NUP50-201ENST00000347635 SEC14L5O43304 696 aa13.36□□□□□ -0.27
NUP50-201ENST00000347635 IL9P15248 144 aa13.36□□□□□ -0.27
NUP50-201ENST00000347635 CSNK1A1P48729 337 aa13.36□□□□□ -0.27
NUP50-201ENST00000347635 C17orf67Q0P5P2 114 aa13.36□□□□□ -0.27
NUP50-201ENST00000347635 C1orf210Q8IVY1 113 aa13.36□□□□□ -0.27
NUP50-201ENST00000347635 OR10R2Q8NGX6 335 aa13.36□□□□□ -0.27
NUP50-201ENST00000347635 ZNF649Q9BS31 505 aa13.36□□□□□ -0.27
NUP50-201ENST00000347635 OR10A2Q9H208 303 aa13.36□□□□□ -0.27
NUP50-201ENST00000347635 RFPL4AA6NLU0 287 aa13.36□□□□□ -0.27
NUP50-201ENST00000347635 RFPL4AL1F8VTS6 287 aa13.36□□□□□ -0.27
NUP50-201ENST00000347635 MSX1P28360 303 aa13.36□□□□□ -0.27
NUP50-201ENST00000347635 DRD3P35462 400 aa13.36□□□□□ -0.27
NUP50-201ENST00000347635 SNU13P55769 128 aaKnown RBP13.36□□□□□ -0.27
NUP50-201ENST00000347635 FAM74A1Q5RGS3 127 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms