RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 NTNG2Q96CW9 530 aa16.58■□□□□ 0.25
HOXA9-201ENST00000343483 MRPL13Q9BYD1 178 aaKnown RBP16.58■□□□□ 0.25
HOXA9-201ENST00000343483 SLITRK2Q9H156 845 aa16.58■□□□□ 0.25
HOXA9-201ENST00000343483 TCF7L1Q9HCS4 588 aa16.58■□□□□ 0.25
HOXA9-201ENST00000343483 LRP12Q9Y561 859 aa16.58■□□□□ 0.25
HOXA9-201ENST00000343483 MRPS18BQ9Y676 258 aaKnown RBP16.58■□□□□ 0.25
HOXA9-201ENST00000343483 V9GY05 133 aa16.58■□□□□ 0.25
HOXA9-201ENST00000343483 TRBV5-5A0A0J9YX44 114 aa16.58■□□□□ 0.24
HOXA9-201ENST00000343483 FAM172BPA6NC97 362 aa16.58■□□□□ 0.24
HOXA9-201ENST00000343483 AQP7P3A6NL99 342 aa16.58■□□□□ 0.24
HOXA9-201ENST00000343483 ZNF254O75437 659 aa16.58■□□□□ 0.24
HOXA9-201ENST00000343483 IGHG1P01857 330 aa16.58■□□□□ 0.24
HOXA9-201ENST00000343483 RIDAP52758 137 aaKnown RBP16.58■□□□□ 0.24
HOXA9-201ENST00000343483 RRAS2P62070 204 aaPredicted RBP16.58■□□□□ 0.24
HOXA9-201ENST00000343483 SIAH3Q8IW03 269 aa16.58■□□□□ 0.24
HOXA9-201ENST00000343483 BEST3Q8N1M1 668 aa16.58■□□□□ 0.24
HOXA9-201ENST00000343483 GPR148Q8TDV2 347 aa16.58■□□□□ 0.24
HOXA9-201ENST00000343483 SLC25A44Q96H78 314 aaPredicted RBP16.58■□□□□ 0.24
HOXA9-201ENST00000343483 TMEM41AQ96HV5 264 aa16.58■□□□□ 0.24
HOXA9-201ENST00000343483 OXGR1Q96P68 337 aa16.58■□□□□ 0.24
HOXA9-201ENST00000343483 RAD1O60671 282 aa16.57■□□□□ 0.24
HOXA9-201ENST00000343483 ZNF432O94892 652 aa16.57■□□□□ 0.24
HOXA9-201ENST00000343483 PNPP00491 289 aa16.57■□□□□ 0.24
HOXA9-201ENST00000343483 F10P00742 488 aa16.57■□□□□ 0.24
HOXA9-201ENST00000343483 OC90Q02509 493 aaPredicted RBP16.57■□□□□ 0.24
HOXA9-201ENST00000343483 MFGE8Q08431 387 aaPredicted RBP16.57■□□□□ 0.24
HOXA9-201ENST00000343483 H3F3CQ6NXT2 135 aa16.57■□□□□ 0.24
HOXA9-201ENST00000343483 CORO6Q6QEF8 472 aa16.57■□□□□ 0.24
HOXA9-201ENST00000343483 NOXO1Q8NFA2 376 aa16.57■□□□□ 0.24
HOXA9-201ENST00000343483 TMEM106AQ96A25 262 aa16.57■□□□□ 0.24
HOXA9-201ENST00000343483 THOC3Q96J01 351 aaKnown RBP16.57■□□□□ 0.24
HOXA9-201ENST00000343483 GPR87Q9BY21 358 aa16.57■□□□□ 0.24
HOXA9-201ENST00000343483 DPAGT1Q9H3H5 408 aa16.57■□□□□ 0.24
HOXA9-201ENST00000343483 PAQR5Q9NXK6 330 aaPredicted RBP16.57■□□□□ 0.24
HOXA9-201ENST00000343483 KLHL13Q9P2N7 655 aa16.57■□□□□ 0.24
HOXA9-201ENST00000343483 SLC22A13Q9Y226 551 aa16.57■□□□□ 0.24
HOXA9-201ENST00000343483 PCDHGA1Q9Y5H4 931 aa16.57■□□□□ 0.24
HOXA9-201ENST00000343483 A0A1W2PPL8 197 aa16.57■□□□□ 0.24
HOXA9-201ENST00000343483 C21orf140B9A014 251 aa16.57■□□□□ 0.24
HOXA9-201ENST00000343483 TNFSF15O95150 251 aa16.57■□□□□ 0.24
HOXA9-201ENST00000343483 PMS2P2O95744 297 aa16.57■□□□□ 0.24
HOXA9-201ENST00000343483 ADRB1P08588 477 aa16.57■□□□□ 0.24
HOXA9-201ENST00000343483 PGA4P0DJD7 388 aa16.57■□□□□ 0.24
HOXA9-201ENST00000343483 PGA3P0DJD8 388 aa16.57■□□□□ 0.24
HOXA9-201ENST00000343483 GPR85P60893 370 aa16.57■□□□□ 0.24
HOXA9-201ENST00000343483 CDK10Q15131 360 aa16.57■□□□□ 0.24
HOXA9-201ENST00000343483 TEX30Q5JUR7 227 aa16.57■□□□□ 0.24
HOXA9-201ENST00000343483 THEM4Q5T1C6 240 aa16.57■□□□□ 0.24
HOXA9-201ENST00000343483 FDX2Q6P4F2 183 aa16.57■□□□□ 0.24
HOXA9-201ENST00000343483 STAC2Q6ZMT1 411 aa16.57■□□□□ 0.24
HOXA9-201ENST00000343483 PRSS45Q7RTY3 260 aa16.57■□□□□ 0.24
HOXA9-201ENST00000343483 OR10H5Q8NGA6 315 aa16.57■□□□□ 0.24
HOXA9-201ENST00000343483 TSEN15Q8WW01 171 aaKnown RBP16.57■□□□□ 0.24
HOXA9-201ENST00000343483 AKAP1Q92667 903 aaKnown RBP eCLIP16.57■□□□□ 0.24
HOXA9-201ENST00000343483 LIN7BQ9HAP6 207 aa16.57■□□□□ 0.24
HOXA9-201ENST00000343483 MCUBQ9NWR8 336 aa16.57■□□□□ 0.24
HOXA9-201ENST00000343483 ING3Q9NXR8 418 aa16.57■□□□□ 0.24
HOXA9-201ENST00000343483 CDV3Q9UKY7 258 aaKnown RBP16.57■□□□□ 0.24
HOXA9-201ENST00000343483 BOLA1Q9Y3E2 137 aa16.57■□□□□ 0.24
HOXA9-201ENST00000343483 SDK2Q58EX2 2172 aa16.57■□□□□ 0.24
HOXA9-201ENST00000343483 EML6Q6ZMW3 1958 aa16.57■□□□□ 0.24
HOXA9-201ENST00000343483 GPR171O14626 319 aa16.56■□□□□ 0.24
HOXA9-201ENST00000343483 CTDSPLO15194 276 aa16.56■□□□□ 0.24
HOXA9-201ENST00000343483 GSTZ1O43708 216 aaPredicted RBP16.56■□□□□ 0.24
HOXA9-201ENST00000343483 CYB561P49447 251 aa16.56■□□□□ 0.24
HOXA9-201ENST00000343483 CLDN12P56749 244 aa16.56■□□□□ 0.24
HOXA9-201ENST00000343483 TRIP6Q15654 476 aaKnown RBP16.56■□□□□ 0.24
HOXA9-201ENST00000343483 BCL2L15Q5TBC7 163 aa16.56■□□□□ 0.24
HOXA9-201ENST00000343483 MTFR2Q6P444 385 aa16.56■□□□□ 0.24
HOXA9-201ENST00000343483 FCRLAQ7L513 359 aa16.56■□□□□ 0.24
HOXA9-201ENST00000343483 HDDC2Q7Z4H3 204 aa16.56■□□□□ 0.24
HOXA9-201ENST00000343483 SLC7A5P1Q8MH63 180 aa16.56■□□□□ 0.24
HOXA9-201ENST00000343483 C11orf40Q8WZ69 217 aa16.56■□□□□ 0.24
HOXA9-201ENST00000343483 PPP1R14AQ96A00 147 aa16.56■□□□□ 0.24
HOXA9-201ENST00000343483 PIGQQ9BRB3 760 aa16.56■□□□□ 0.24
HOXA9-201ENST00000343483 KLHL9Q9P2J3 617 aa16.56■□□□□ 0.24
HOXA9-201ENST00000343483 FBXL3Q9UKT7 428 aa16.56■□□□□ 0.24
HOXA9-201ENST00000343483 PCSK5Q92824 1860 aa16.56■□□□□ 0.24
HOXA9-201ENST00000343483 TRAV6A0A075B6T7 132 aa16.55■□□□□ 0.24
HOXA9-201ENST00000343483 TM4SF5O14894 197 aa16.55■□□□□ 0.24
HOXA9-201ENST00000343483 TMEM127O75204 238 aa16.55■□□□□ 0.24
HOXA9-201ENST00000343483 AQP8O94778 261 aa16.55■□□□□ 0.24
HOXA9-201ENST00000343483 HRGP04196 525 aa16.55■□□□□ 0.24
HOXA9-201ENST00000343483 ZNF17P17021 662 aa16.55■□□□□ 0.24
HOXA9-201ENST00000343483 CCR9P51686 369 aa16.55■□□□□ 0.24
HOXA9-201ENST00000343483 PCK2Q16822 640 aa16.55■□□□□ 0.24
HOXA9-201ENST00000343483 OR6X1Q8NH79 312 aa16.55■□□□□ 0.24
HOXA9-201ENST00000343483 ST7LQ8TDW4 575 aa16.55■□□□□ 0.24
HOXA9-201ENST00000343483 SMIM4Q8WVI0 70 aa16.55■□□□□ 0.24
HOXA9-201ENST00000343483 SEC61A2Q9H9S3 476 aa16.55■□□□□ 0.24
HOXA9-201ENST00000343483 NUDT15Q9NV35 164 aa16.55■□□□□ 0.24
HOXA9-201ENST00000343483 RABL2AQ9UBK7 228 aaPredicted RBP16.55■□□□□ 0.24
HOXA9-201ENST00000343483 RABL2BQ9UNT1 228 aa16.55■□□□□ 0.24
HOXA9-201ENST00000343483 MED12Q93074 2177 aa16.55■□□□□ 0.24
HOXA9-201ENST00000343483 IGHV3-15A0A0B4J1V0 119 aa16.55■□□□□ 0.24
HOXA9-201ENST00000343483 ZNF726A6NNF4 738 aa16.55■□□□□ 0.24
HOXA9-201ENST00000343483 EIF1AYO14602 144 aaKnown RBP16.55■□□□□ 0.24
HOXA9-201ENST00000343483 DHFRP00374 187 aa16.55■□□□□ 0.24
HOXA9-201ENST00000343483 EIF1AXP47813 144 aaKnown RBP16.55■□□□□ 0.24
HOXA9-201ENST00000343483 LINGO2Q7L985 606 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms