RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 CEMP1Q6PRD7 247 aaPredicted RBP8.71□□□□□ -1.02
ATXN3-201ENST00000340660 ARL9Q6T311 187 aa8.71□□□□□ -1.02
ATXN3-201ENST00000340660 FRMD7Q6ZUT3 714 aa8.71□□□□□ -1.02
ATXN3-201ENST00000340660 LRRC8AQ8IWT6 810 aa8.71□□□□□ -1.02
ATXN3-201ENST00000340660 C1orf87Q8N0U7 546 aa8.71□□□□□ -1.02
ATXN3-201ENST00000340660 SLC26A10Q8NG04 563 aa8.71□□□□□ -1.02
ATXN3-201ENST00000340660 OR4F6Q8NGB9 312 aa8.71□□□□□ -1.02
ATXN3-201ENST00000340660 OR10AD1Q8NGE0 317 aa8.71□□□□□ -1.02
ATXN3-201ENST00000340660 EMC6Q9BV81 110 aa8.71□□□□□ -1.02
ATXN3-201ENST00000340660 ULBP2Q9BZM5 246 aa8.71□□□□□ -1.02
ATXN3-201ENST00000340660 RHOJQ9H4E5 214 aa8.71□□□□□ -1.02
ATXN3-201ENST00000340660 MAN2C1Q9NTJ4 1040 aa8.71□□□□□ -1.02
ATXN3-201ENST00000340660 ABHD10Q9NUJ1 306 aa8.71□□□□□ -1.02
ATXN3-201ENST00000340660 TBCCD1Q9NVR7 557 aa8.71□□□□□ -1.02
ATXN3-201ENST00000340660 MKS1Q9NXB0 559 aa8.71□□□□□ -1.02
ATXN3-201ENST00000340660 NFU1Q9UMS0 254 aa8.71□□□□□ -1.02
ATXN3-201ENST00000340660 IGLV1-36A0A0B4J1U3 117 aa8.7□□□□□ -1.02
ATXN3-201ENST00000340660 IQCMA0A1B0GVH7 501 aa8.7□□□□□ -1.02
ATXN3-201ENST00000340660 VGLL3A8MV65 326 aa8.7□□□□□ -1.02
ATXN3-201ENST00000340660 MANBAO00462 879 aa8.7□□□□□ -1.02
ATXN3-201ENST00000340660 DOK2O60496 412 aa8.7□□□□□ -1.02
ATXN3-201ENST00000340660 PTHP01270 115 aa8.7□□□□□ -1.02
ATXN3-201ENST00000340660 ANXA4P09525 319 aaPredicted RBP8.7□□□□□ -1.02
ATXN3-201ENST00000340660 PAICSP22234 425 aaKnown RBP8.7□□□□□ -1.02
ATXN3-201ENST00000340660 ALDH18A1P54886 795 aaKnown RBP8.7□□□□□ -1.02
ATXN3-201ENST00000340660 FHL3Q13643 280 aa8.7□□□□□ -1.02
ATXN3-201ENST00000340660 PEX26Q7Z412 305 aa8.7□□□□□ -1.02
ATXN3-201ENST00000340660 ZER1Q7Z7L7 766 aa8.7□□□□□ -1.02
ATXN3-201ENST00000340660 ARMC8Q8IUR7 673 aa8.7□□□□□ -1.02
ATXN3-201ENST00000340660 CMTM4Q8IZR5 234 aa8.7□□□□□ -1.02
ATXN3-201ENST00000340660 MIER2Q8N344 545 aa8.7□□□□□ -1.02
ATXN3-201ENST00000340660 STPG3Q8N7X2 389 aa8.7□□□□□ -1.02
ATXN3-201ENST00000340660 NAT8LQ8N9F0 302 aa8.7□□□□□ -1.02
ATXN3-201ENST00000340660 NPEPL1Q8NDH3 523 aa8.7□□□□□ -1.02
ATXN3-201ENST00000340660 PNPT1Q8TCS8 783 aaKnown RBP8.7□□□□□ -1.02
ATXN3-201ENST00000340660 ST8SIA4Q92187 359 aa8.7□□□□□ -1.02
ATXN3-201ENST00000340660 FAM120BQ96EK7 910 aaKnown RBP8.7□□□□□ -1.02
ATXN3-201ENST00000340660 POM121L2Q96KW2 1035 aa8.7□□□□□ -1.02
ATXN3-201ENST00000340660 LRR1Q96L50 414 aa8.7□□□□□ -1.02
ATXN3-201ENST00000340660 OXGR1Q96P68 337 aa8.7□□□□□ -1.02
ATXN3-201ENST00000340660 SDF2Q99470 211 aa8.7□□□□□ -1.02
ATXN3-201ENST00000340660 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.7□□□□□ -1.02
ATXN3-201ENST00000340660 LOC100509620A0A075B734 347 aa8.69□□□□□ -1.02
ATXN3-201ENST00000340660 MIF4GDA9UHW6 222 aaKnown RBP8.69□□□□□ -1.02
ATXN3-201ENST00000340660 FTCDNL1E5RQL4 147 aa8.69□□□□□ -1.02
ATXN3-201ENST00000340660 MS4A18H0YCH9 400 aa8.69□□□□□ -1.02
ATXN3-201ENST00000340660 RTL8CO15255 209 aa8.69□□□□□ -1.02
ATXN3-201ENST00000340660 PDPK1O15530 556 aa8.69□□□□□ -1.02
ATXN3-201ENST00000340660 GFAPP14136 432 aa8.69□□□□□ -1.02
ATXN3-201ENST00000340660 AHCYP23526 432 aa8.69□□□□□ -1.02
ATXN3-201ENST00000340660 ERFP50548 548 aa8.69□□□□□ -1.02
ATXN3-201ENST00000340660 C1DQ13901 141 aaKnown RBP8.69□□□□□ -1.02
ATXN3-201ENST00000340660 DEFB136Q30KP8 78 aa8.69□□□□□ -1.02
ATXN3-201ENST00000340660 AP1ARQ63HQ0 302 aa8.69□□□□□ -1.02
ATXN3-201ENST00000340660 SFRP4Q6FHJ7 346 aaPredicted RBP8.69□□□□□ -1.02
ATXN3-201ENST00000340660 ANKRD26P1Q6NSI1 321 aa8.69□□□□□ -1.02
ATXN3-201ENST00000340660 PLBD1Q6P4A8 553 aa8.69□□□□□ -1.02
ATXN3-201ENST00000340660 SASS6Q6UVJ0 657 aa8.69□□□□□ -1.02
ATXN3-201ENST00000340660 DYNAPQ8N1N2 210 aa8.69□□□□□ -1.02
ATXN3-201ENST00000340660 HIPK4Q8NE63 616 aa8.69□□□□□ -1.02
ATXN3-201ENST00000340660 TSEN15Q8WW01 171 aaKnown RBP8.69□□□□□ -1.02
ATXN3-201ENST00000340660 ACPTQ9BZG2 426 aa8.69□□□□□ -1.02
ATXN3-201ENST00000340660 B3GAT2Q9NPZ5 323 aa8.69□□□□□ -1.02
ATXN3-201ENST00000340660 EIF3KQ9UBQ5 218 aaKnown RBP8.69□□□□□ -1.02
ATXN3-201ENST00000340660 CAPN7Q9Y6W3 813 aa8.69□□□□□ -1.02
ATXN3-201ENST00000340660 C5orf49A4QMS7 147 aa8.68□□□□□ -1.02
ATXN3-201ENST00000340660 CLDN24A6NM45 220 aa8.68□□□□□ -1.02
ATXN3-201ENST00000340660 AP4M1O00189 453 aa8.68□□□□□ -1.02
ATXN3-201ENST00000340660 INHBAP08476 426 aa8.68□□□□□ -1.02
ATXN3-201ENST00000340660 STOMP27105 288 aa8.68□□□□□ -1.02
ATXN3-201ENST00000340660 PRKAR1BP31321 381 aa8.68□□□□□ -1.02
ATXN3-201ENST00000340660 GSTM5P46439 218 aa8.68□□□□□ -1.02
ATXN3-201ENST00000340660 ACSM2AQ08AH3 577 aa8.68□□□□□ -1.02
ATXN3-201ENST00000340660 PTGR1Q14914 329 aa8.68□□□□□ -1.02
ATXN3-201ENST00000340660 ZKSCAN8Q15776 578 aaPredicted RBP8.68□□□□□ -1.02
ATXN3-201ENST00000340660 SPIN4Q56A73 249 aa8.68□□□□□ -1.02
ATXN3-201ENST00000340660 ACSM2BQ68CK6 577 aa8.68□□□□□ -1.02
ATXN3-201ENST00000340660 NCR3LG1Q68D85 454 aa8.68□□□□□ -1.02
ATXN3-201ENST00000340660 ATG16L2Q8NAA4 619 aa8.68□□□□□ -1.02
ATXN3-201ENST00000340660 CFAP36Q96G28 342 aa8.68□□□□□ -1.02
ATXN3-201ENST00000340660 TRIM5Q9C035 493 aa8.68□□□□□ -1.02
ATXN3-201ENST00000340660 TMEM38BQ9NVV0 291 aa8.68□□□□□ -1.02
ATXN3-201ENST00000340660 MKLN1Q9UL63 735 aa8.68□□□□□ -1.02
ATXN3-201ENST00000340660 SLC35A3Q9Y2D2 325 aa8.68□□□□□ -1.02
ATXN3-201ENST00000340660 WDR91A4D1P6 747 aa8.67□□□□□ -1.02
ATXN3-201ENST00000340660 NPIPB7O75200 414 aa8.67□□□□□ -1.02
ATXN3-201ENST00000340660 PIAS1O75925 651 aa8.67□□□□□ -1.02
ATXN3-201ENST00000340660 MMP7P09237 267 aaPredicted RBP8.67□□□□□ -1.02
ATXN3-201ENST00000340660 DUX4L4P0CJ87 422 aa8.67□□□□□ -1.02
ATXN3-201ENST00000340660 G6PDP11413 515 aa8.67□□□□□ -1.02
ATXN3-201ENST00000340660 HLA-DOBP13765 273 aa8.67□□□□□ -1.02
ATXN3-201ENST00000340660 ETS2P15036 469 aa8.67□□□□□ -1.02
ATXN3-201ENST00000340660 KITLGP21583 273 aa8.67□□□□□ -1.02
ATXN3-201ENST00000340660 CCT3P49368 545 aaKnown RBP8.67□□□□□ -1.02
ATXN3-201ENST00000340660 INSL3P51460 131 aa8.67□□□□□ -1.02
ATXN3-201ENST00000340660 CLEC12AQ5QGZ9 265 aa8.67□□□□□ -1.02
ATXN3-201ENST00000340660 SEL1L2Q5TEA6 688 aa8.67□□□□□ -1.02
ATXN3-201ENST00000340660 C1orf140Q5VVS0 124 aa8.67□□□□□ -1.02
ATXN3-201ENST00000340660 WDR88Q6ZMY6 472 aa8.67□□□□□ -1.02
ATXN3-201ENST00000340660 RPS27LQ71UM5 84 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms