RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 ZNF28P17035 718 aa14.6□□□□□ -0.07
LITAF-201ENST00000339430 MNDAP41218 407 aa14.6□□□□□ -0.07
LITAF-201ENST00000339430 SLC26A5P58743 744 aa14.6□□□□□ -0.07
LITAF-201ENST00000339430 DCDP81605 110 aaKnown RBP14.6□□□□□ -0.07
LITAF-201ENST00000339430 MC2RQ01718 297 aa14.6□□□□□ -0.07
LITAF-201ENST00000339430 HSPB2Q16082 182 aa14.6□□□□□ -0.07
LITAF-201ENST00000339430 FDX2Q6P4F2 183 aa14.6□□□□□ -0.07
LITAF-201ENST00000339430 ATG5Q9H1Y0 275 aa14.6□□□□□ -0.07
LITAF-201ENST00000339430 NPDC1Q9NQX5 325 aaPredicted RBP14.6□□□□□ -0.07
LITAF-201ENST00000339430 PTTG3PQ9NZH4 202 aa14.6□□□□□ -0.07
LITAF-201ENST00000339430 EMC9Q9Y3B6 208 aa14.6□□□□□ -0.07
LITAF-201ENST00000339430 NPTNQ9Y639 398 aa14.6□□□□□ -0.07
LITAF-201ENST00000339430 FTCDNL1E5RQL4 147 aa14.59□□□□□ -0.07
LITAF-201ENST00000339430 MS4A18H0YCH9 400 aa14.59□□□□□ -0.07
LITAF-201ENST00000339430 H7C417 338 aa14.59□□□□□ -0.07
LITAF-201ENST00000339430 NDUFB6O95139 128 aa14.59□□□□□ -0.07
LITAF-201ENST00000339430 GLO1Q04760 184 aa14.59□□□□□ -0.07
LITAF-201ENST00000339430 PUDPQ08623 228 aa14.59□□□□□ -0.07
LITAF-201ENST00000339430 MS4A18Q3C1V0 323 aa14.59□□□□□ -0.07
LITAF-201ENST00000339430 SEZ6L2Q6UXD5 910 aa14.59□□□□□ -0.07
LITAF-201ENST00000339430 APCDD1LQ8NCL9 501 aa14.59□□□□□ -0.07
LITAF-201ENST00000339430 PLPP5Q8NEB5 264 aa14.59□□□□□ -0.07
LITAF-201ENST00000339430 OR8S1Q8NH09 359 aa14.59□□□□□ -0.07
LITAF-201ENST00000339430 OR52N5Q8NH56 324 aa14.59□□□□□ -0.07
LITAF-201ENST00000339430 STK35Q8TDR2 534 aa14.59□□□□□ -0.07
LITAF-201ENST00000339430 ASB5Q8WWX0 329 aa14.59□□□□□ -0.07
LITAF-201ENST00000339430 DIABLOQ9NR28 239 aa14.59□□□□□ -0.07
LITAF-201ENST00000339430 MED29Q9NX70 200 aa14.59□□□□□ -0.07
LITAF-201ENST00000339430 EMC3Q9P0I2 261 aa14.59□□□□□ -0.07
LITAF-201ENST00000339430 MTFP1Q9UDX5 166 aa14.59□□□□□ -0.07
LITAF-201ENST00000339430 CGGBP1Q9UFW8 167 aaPredicted RBP14.59□□□□□ -0.07
LITAF-201ENST00000339430 IGKV1D-43A0A0B4J1Z2 117 aa14.59□□□□□ -0.07
LITAF-201ENST00000339430 H3BML4 177 aa14.59□□□□□ -0.07
LITAF-201ENST00000339430 EIF1AYO14602 144 aaKnown RBP14.59□□□□□ -0.07
LITAF-201ENST00000339430 OR2T1O43869 369 aa14.59□□□□□ -0.07
LITAF-201ENST00000339430 SLC22A5O76082 557 aa14.59□□□□□ -0.07
LITAF-201ENST00000339430 MPC2O95563 127 aa14.59□□□□□ -0.07
LITAF-201ENST00000339430 TSPAN5P62079 268 aa14.59□□□□□ -0.07
LITAF-201ENST00000339430 ROM1Q03395 351 aa14.59□□□□□ -0.07
LITAF-201ENST00000339430 ZNF385CQ66K41 422 aaPredicted RBP14.59□□□□□ -0.07
LITAF-201ENST00000339430 TMEM225Q6GV28 225 aa14.59□□□□□ -0.07
LITAF-201ENST00000339430 LRFN4Q6PJG9 635 aa14.59□□□□□ -0.07
LITAF-201ENST00000339430 CORO6Q6QEF8 472 aa14.59□□□□□ -0.07
LITAF-201ENST00000339430 CATSPERDQ86XM0 798 aa14.59□□□□□ -0.07
LITAF-201ENST00000339430 ZNF248Q8NDW4 579 aa14.59□□□□□ -0.07
LITAF-201ENST00000339430 OR1J4Q8NGS1 313 aa14.59□□□□□ -0.07
LITAF-201ENST00000339430 C15orf40Q8WUR7 153 aa14.59□□□□□ -0.07
LITAF-201ENST00000339430 DVL3Q92997 716 aaPredicted RBP14.59□□□□□ -0.07
LITAF-201ENST00000339430 SORCS2Q96PQ0 1159 aa14.59□□□□□ -0.07
LITAF-201ENST00000339430 GINS4Q9BRT9 223 aa14.59□□□□□ -0.07
LITAF-201ENST00000339430 AKIRIN1Q9H9L7 192 aaPredicted RBP14.59□□□□□ -0.07
LITAF-201ENST00000339430 SLC39A1Q9NY26 324 aa14.59□□□□□ -0.07
LITAF-201ENST00000339430 HRH3Q9Y5N1 445 aa14.59□□□□□ -0.07
LITAF-201ENST00000339430 TMEM272A0A1B0GTI8 110 aa14.58□□□□□ -0.08
LITAF-201ENST00000339430 CIB4A0PJX0 185 aa14.58□□□□□ -0.08
LITAF-201ENST00000339430 DCDC2BA2VCK2 349 aa14.58□□□□□ -0.08
LITAF-201ENST00000339430 NPIPA5E9PKD4 350 aa14.58□□□□□ -0.08
LITAF-201ENST00000339430 MEN1O00255 615 aa14.58□□□□□ -0.08
LITAF-201ENST00000339430 SLC17A2O00624 439 aa14.58□□□□□ -0.08
LITAF-201ENST00000339430 CREBL2O60519 120 aaPredicted RBP14.58□□□□□ -0.08
LITAF-201ENST00000339430 LMX1BO60663 402 aa14.58□□□□□ -0.08
LITAF-201ENST00000339430 IGHMP01871 453 aa14.58□□□□□ -0.08
LITAF-201ENST00000339430 HEXBP07686 556 aa14.58□□□□□ -0.08
LITAF-201ENST00000339430 GTF2F2P13984 249 aa14.58□□□□□ -0.08
LITAF-201ENST00000339430 PSMA6P60900 246 aaKnown RBP14.58□□□□□ -0.08
LITAF-201ENST00000339430 POU3F1Q03052 451 aaPredicted RBP14.58□□□□□ -0.08
LITAF-201ENST00000339430 POU4F3Q15319 338 aa14.58□□□□□ -0.08
LITAF-201ENST00000339430 TRIP6Q15654 476 aaKnown RBP14.58□□□□□ -0.08
LITAF-201ENST00000339430 LCN10Q6JVE6 187 aa14.58□□□□□ -0.08
LITAF-201ENST00000339430 DCXRQ7Z4W1 244 aa14.58□□□□□ -0.08
LITAF-201ENST00000339430 OR51A2Q8NGJ7 313 aa14.58□□□□□ -0.08
LITAF-201ENST00000339430 TMEM234Q8WY98 164 aa14.58□□□□□ -0.08
LITAF-201ENST00000339430 B3GNT2Q9NY97 397 aa14.58□□□□□ -0.08
LITAF-201ENST00000339430 NPIPA1Q9UND3 350 aa14.58□□□□□ -0.08
LITAF-201ENST00000339430 PPIEQ9UNP9 301 aaKnown RBP14.58□□□□□ -0.08
LITAF-201ENST00000339430 LOXL2Q9Y4K0 774 aa14.58□□□□□ -0.08
LITAF-201ENST00000339430 ZNF292O60281 2723 aa14.58□□□□□ -0.08
LITAF-201ENST00000339430 LOC100289279A0A1B0GTE1 492 aa14.58□□□□□ -0.08
LITAF-201ENST00000339430 LOC101059948A0A1B0GTJ6 334 aa14.58□□□□□ -0.08
LITAF-201ENST00000339430 A0A1W2PQ72 361 aa14.58□□□□□ -0.08
LITAF-201ENST00000339430 PCNX2A6NKB5 2137 aa14.58□□□□□ -0.08
LITAF-201ENST00000339430 LEUTXA8MZ59 168 aa14.58□□□□□ -0.08
LITAF-201ENST00000339430 RLN1P04808 185 aa14.58□□□□□ -0.08
LITAF-201ENST00000339430 VSIG10L2P0DP72 767 aa14.58□□□□□ -0.08
LITAF-201ENST00000339430 ZNF823P16415 610 aa14.58□□□□□ -0.08
LITAF-201ENST00000339430 CRABP1P29762 137 aa14.58□□□□□ -0.08
LITAF-201ENST00000339430 UBE2MP61081 183 aaKnown RBP14.58□□□□□ -0.08
LITAF-201ENST00000339430 DHRS13Q6UX07 377 aa14.58□□□□□ -0.08
LITAF-201ENST00000339430 NHLRC1Q6VVB1 395 aa14.58□□□□□ -0.08
LITAF-201ENST00000339430 DNM1P46Q6ZS02 220 aa14.58□□□□□ -0.08
LITAF-201ENST00000339430 ANKRD37Q7Z713 158 aa14.58□□□□□ -0.08
LITAF-201ENST00000339430 SLC25A44Q96H78 314 aaPredicted RBP14.58□□□□□ -0.08
LITAF-201ENST00000339430 EMC6Q9BV81 110 aa14.58□□□□□ -0.08
LITAF-201ENST00000339430 STRADBQ9C0K7 418 aa14.58□□□□□ -0.08
LITAF-201ENST00000339430 PMS2P1A4D2B8 440 aa14.57□□□□□ -0.08
LITAF-201ENST00000339430 OPN1LWP04000 364 aa14.57□□□□□ -0.08
LITAF-201ENST00000339430 SPOCK1Q08629 439 aa14.57□□□□□ -0.08
LITAF-201ENST00000339430 GLYATL3Q5SZD4 288 aa14.57□□□□□ -0.08
LITAF-201ENST00000339430 ZNF626Q68DY1 528 aa14.57□□□□□ -0.08
LITAF-201ENST00000339430 PIP4P1Q86T03 277 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms