RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 B3GALT1Q9Y5Z6 326 aa7.44□□□□□ -1.22
HPS4-201ENST00000336873 R4GN57 208 aa7.44□□□□□ -1.22
HPS4-201ENST00000336873 A0A0A6YYH2 397 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 TRAV20A0A0B4J274 112 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 A0A1W2PPC4 97 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 A6NJ64 397 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 C5orf67F2Z3F1 127 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 AIPO00170 330 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 SC5DO75845 299 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 PRH1P02810 166 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 TRAPPC2P0DI81 140 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 TRAPPC2BP0DI82 140 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 TMEM225BP0DP42 221 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 ZNF74Q16587 644 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 SPIN3Q5JUX0 258 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 EID2Q8N6I1 236 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 ARIH2OSQ8N7S6 290 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 STEAP2Q8NFT2 490 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 PAQR8Q8TEZ7 354 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 WNT2BQ93097 391 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 ZNF285Q96NJ3 590 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 ABHD6Q9BV23 337 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 POFUT1Q9H488 388 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 POMT2Q9UKY4 750 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 DENND4CQ5VZ89 1909 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 TRANK1O15050 2925 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 TMEM82A0PJX8 343 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 OR14I1A6ND48 311 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 SULT2B1O00204 365 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 PIN1P1O15428 100 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 IGHA1P01876 353 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 RLN2P04090 185 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 PATE4P0C8F1 98 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 RRASP10301 218 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 ERGP11308 486 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 CTRB1P17538 263 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 ABCD3P28288 659 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 MRPS21P82921 87 aaKnown RBP7.43□□□□□ -1.22
HPS4-201ENST00000336873 GSG1Q2KHT4 349 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 YIF1BQ5BJH7 314 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 EXOSC6Q5RKV6 272 aaKnown RBP7.43□□□□□ -1.22
HPS4-201ENST00000336873 DMKNQ6E0U4 476 aaPredicted RBP7.43□□□□□ -1.22
HPS4-201ENST00000336873 CTRB2Q6GPI1 263 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 SLC25A24Q6NUK1 477 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 TMEM81Q6P7N7 255 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 TMEM88Q6PEY1 159 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 TEX261Q6UWH6 196 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 TRAPPC6BQ86SZ2 158 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 SLC41A2Q96JW4 573 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 VSTM2LQ96N03 204 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 TSPAN32Q96QS1 320 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 LMF2Q9BU23 707 aaKnown RBP7.43□□□□□ -1.22
HPS4-201ENST00000336873 FBRSQ9HAH7 460 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 C12orf10Q9HB07 376 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 SERINC1Q9NRX5 453 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 SCML1Q9UN30 329 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 EXOGQ9Y2C4 368 aaKnown RBP7.43□□□□□ -1.22
HPS4-201ENST00000336873 U3KQ87 197 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 LOC107986453A0A1B0GWG9 222 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 EFCAB7A8K855 629 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 SCRG1O75711 98 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 OR2J2O76002 312 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 RAF1P04049 648 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 AKAIN1P0CW23 69 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 CAPZBP47756 277 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 LGALSLQ3ZCW2 172 aaPredicted RBP7.43□□□□□ -1.22
HPS4-201ENST00000336873 BAIAP2L2Q6UXY1 529 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 ZNF454Q8N9F8 522 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 BHLHE23Q8NDY6 225 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 TMEM234Q8WY98 164 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 ZBTB8AQ96BR9 441 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 SHDQ96IW2 340 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 MED18Q9BUE0 208 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 RTN4RQ9BZR6 473 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 COPZ2Q9P299 210 aa7.43□□□□□ -1.22
HPS4-201ENST00000336873 ZNF230Q9UIE0 474 aaPredicted RBP7.43□□□□□ -1.22
HPS4-201ENST00000336873 WNK2Q9Y3S1 2297 aa7.42□□□□□ -1.22
HPS4-201ENST00000336873 SULT1B1O43704 296 aa7.42□□□□□ -1.22
HPS4-201ENST00000336873 FADS1O60427 444 aa7.42□□□□□ -1.22
HPS4-201ENST00000336873 TBX19O60806 448 aa7.42□□□□□ -1.22
HPS4-201ENST00000336873 IGHV4-34P06331 123 aa7.42□□□□□ -1.22
HPS4-201ENST00000336873 AMY2BP19961 511 aa7.42□□□□□ -1.22
HPS4-201ENST00000336873 CAPZA1P52907 286 aa7.42□□□□□ -1.22
HPS4-201ENST00000336873 HSD11B2P80365 405 aa7.42□□□□□ -1.22
HPS4-201ENST00000336873 ESCO2Q56NI9 601 aa7.42□□□□□ -1.22
HPS4-201ENST00000336873 MESTQ5EB52 335 aa7.42□□□□□ -1.22
HPS4-201ENST00000336873 ZBTB37Q5TC79 503 aa7.42□□□□□ -1.22
HPS4-201ENST00000336873 SLC16A9Q7RTY1 509 aa7.42□□□□□ -1.22
HPS4-201ENST00000336873 C12orf45Q8N5I9 185 aaPredicted RBP7.42□□□□□ -1.22
HPS4-201ENST00000336873 DCUN1D4Q92564 292 aa7.42□□□□□ -1.22
HPS4-201ENST00000336873 PGLYRP3Q96LB9 341 aa7.42□□□□□ -1.22
HPS4-201ENST00000336873 GNRHR2Q96P88 292 aa7.42□□□□□ -1.22
HPS4-201ENST00000336873 HRH4Q9H3N8 390 aa7.42□□□□□ -1.22
HPS4-201ENST00000336873 APMAPQ9HDC9 416 aa7.42□□□□□ -1.22
HPS4-201ENST00000336873 PCDHGA5Q9Y5G8 931 aa7.42□□□□□ -1.22
HPS4-201ENST00000336873 ASPMQ8IZT6 3477 aa7.42□□□□□ -1.22
HPS4-201ENST00000336873 A0A087WV62 115 aa7.42□□□□□ -1.22
HPS4-201ENST00000336873 PRR32B1ATL7 298 aa7.42□□□□□ -1.22
HPS4-201ENST00000336873 DISC1C4P0D8 188 aa7.42□□□□□ -1.22
HPS4-201ENST00000336873 GPRIN2O60269 458 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms