RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 SLC26A10Q8NG04 563 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 RXFP4Q8TDU9 374 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 HSPB8Q9UJY1 196 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 C17orf105B2RV13 164 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 CNIH1O95406 144 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 GYPBP06028 91 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 STAG3L3P0CL85 134 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 SRP9P49458 86 aaKnown RBP5.69□□□□□ -1.5
CSMD1-201ENST00000335551 SNRPEP62304 92 aaKnown RBP5.69□□□□□ -1.5
CSMD1-201ENST00000335551 HYAL4Q2M3T9 481 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 OR2D3Q8NGH3 330 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 OR52I1Q8NGK6 324 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 ADGRG7Q96K78 797 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 NOSIPQ9Y314 301 aaKnown RBP5.69□□□□□ -1.5
CSMD1-201ENST00000335551 LRRC3CA6NJW4 275 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 ZNF732B4DXR9 585 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 PLRG1O43660 514 aaKnown RBP5.69□□□□□ -1.5
CSMD1-201ENST00000335551 ENSAO43768 121 aaKnown RBP5.69□□□□□ -1.5
CSMD1-201ENST00000335551 FDX2Q6P4F2 183 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 KCNK15Q9H427 330 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 FLVCR1Q9Y5Y0 555 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 DOCK5Q9H7D0 1870 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 PHIPQ8WWQ0 1821 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 OR8G3PP0DMU2 310 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 GJA4P35212 333 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 GNG4P50150 75 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 HERVK_113P61574 105 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 PLXDC2Q6UX71 529 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 SYT9Q86SS6 491 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 ZC3H3Q8IXZ2 948 aaKnown RBP5.69□□□□□ -1.5
CSMD1-201ENST00000335551 GALNT16Q8N428 558 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 OR5A2Q8NGI9 324 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 OR2G2Q8NGZ5 317 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 LKAAEAR1Q8TD35 194 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 KLRG1Q96E93 195 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 IKZF5Q9H5V7 419 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 TMEM231Q9H6L2 316 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 TRAV34A0A0B4J273 112 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 POM121BA6NF01 834 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 H0YIV9 168 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 SCGB1A1P11684 91 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 CPMP14384 443 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 CLDN12P56749 244 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 FAM189BP81408 668 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 TXNDC8Q6A555 127 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 LSMEM1Q8N8F7 131 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 UTP4Q969X6 686 aaKnown RBP5.69□□□□□ -1.5
CSMD1-201ENST00000335551 PACRGQ96M98 296 aaPredicted RBP5.69□□□□□ -1.5
CSMD1-201ENST00000335551 SLC46A1Q96NT5 459 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 ELAVL4P26378 380 aaKnown RBP5.69□□□□□ -1.5
CSMD1-201ENST00000335551 PTRH1Q86Y79 214 aaKnown RBP5.69□□□□□ -1.5
CSMD1-201ENST00000335551 GABRG1Q8N1C3 465 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 OR4C16Q8NGL9 310 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 SCMH1Q96GD3 660 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 NPAS1Q99742 590 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 FAM234AQ9H0X4 552 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 PRO1933Q9H354 126 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 ZNF142P52746 1687 aaPredicted RBP5.69□□□□□ -1.5
CSMD1-201ENST00000335551 ZNF264O43296 627 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 NXPH2O95156 264 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 FPGSQ05932 587 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 CTU2Q2VPK5 515 aaKnown RBP5.69□□□□□ -1.5
CSMD1-201ENST00000335551 PM20D1Q6GTS8 502 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 OR4A47Q6IF82 309 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 Q6ZVL8 140 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 OR4A4PQ8NGN8 299 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 FAM210BQ96KR6 192 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 LRIT1Q9P2V4 623 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 NAT8BQ9UHF3 227 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 GABRR3A8MPY1 467 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 KDM4EB2RXH2 506 aaPredicted RBP5.69□□□□□ -1.5
CSMD1-201ENST00000335551 CTSLP07711 333 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 CYC1P08574 325 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 OR1D4P47884 311 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 SPINT3P49223 89 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 COX19Q49B96 90 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 DTWD2Q8NBA8 298 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 FBXW5Q969U6 566 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 NGBQ9NPG2 151 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 NUMBLQ9Y6R0 609 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 BMI1P35226 326 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 HLA-BQ31612 363 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 LYG2Q86SG7 212 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 POM121Q96HA1 1249 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 IL20Q9NYY1 176 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 LHX3Q9UBR4 397 aa5.69□□□□□ -1.5
CSMD1-201ENST00000335551 HSPB2A8KAH6 182 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 FAM155AB1AL88 458 aaPredicted RBP5.68□□□□□ -1.5
CSMD1-201ENST00000335551 HSPB6O14558 160 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 HSD17B6O14756 317 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 PTHLHP12272 177 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 IL1RNP18510 177 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 DOC2BQ14184 412 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 HSPB2Q16082 182 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 SPRED3Q2MJR0 410 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 SPRYD7Q5W111 196 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 DHRS4L2Q6PKH6 230 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 OR8B4Q96RC9 309 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 CDCA4Q9BXL8 241 aa5.68□□□□□ -1.5
CSMD1-201ENST00000335551 GPR87Q9BY21 358 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms