RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 ALG8Q9BVK2 526 aa18.82■□□□□ 0.6
TPM1-204ENST00000334895 CDADC1Q9BWV3 514 aa18.82■□□□□ 0.6
TPM1-204ENST00000334895 GCN1Q92616 2671 aaKnown RBP18.81■□□□□ 0.6
TPM1-204ENST00000334895 FARS2O95363 451 aaKnown RBP18.81■□□□□ 0.6
TPM1-204ENST00000334895 MMP7P09237 267 aaPredicted RBP18.81■□□□□ 0.6
TPM1-204ENST00000334895 CHRNB4P30926 498 aa18.81■□□□□ 0.6
TPM1-204ENST00000334895 HIST1H3AP68431 136 aa18.81■□□□□ 0.6
TPM1-204ENST00000334895 TGFBR3Q03167 851 aa18.81■□□□□ 0.6
TPM1-204ENST00000334895 AQP6Q13520 282 aa18.81■□□□□ 0.6
TPM1-204ENST00000334895 HIST2H3PS2Q5TEC6 136 aa18.81■□□□□ 0.6
TPM1-204ENST00000334895 OR2G6Q5TZ20 316 aa18.81■□□□□ 0.6
TPM1-204ENST00000334895 MTFR2Q6P444 385 aa18.81■□□□□ 0.6
TPM1-204ENST00000334895 ZNF322Q6U7Q0 402 aaPredicted RBP18.81■□□□□ 0.6
TPM1-204ENST00000334895 HIST2H3AQ71DI3 136 aa18.81■□□□□ 0.6
TPM1-204ENST00000334895 SLC16A14Q7RTX9 510 aa18.81■□□□□ 0.6
TPM1-204ENST00000334895 NANOGP1Q8N7R0 232 aa18.81■□□□□ 0.6
TPM1-204ENST00000334895 ZNF485Q8NCK3 441 aa18.81■□□□□ 0.6
TPM1-204ENST00000334895 C1orf162Q8NEQ5 155 aaPredicted RBP18.81■□□□□ 0.6
TPM1-204ENST00000334895 NOX3Q9HBY0 568 aa18.81■□□□□ 0.6
TPM1-204ENST00000334895 PNRC2Q9NPJ4 139 aaKnown RBP18.81■□□□□ 0.6
TPM1-204ENST00000334895 SNX5Q9Y5X3 404 aa18.81■□□□□ 0.6
TPM1-204ENST00000334895 TMEM14AQ9Y6G1 99 aa18.81■□□□□ 0.6
TPM1-204ENST00000334895 CIB4A0PJX0 185 aa18.8■□□□□ 0.6
TPM1-204ENST00000334895 PSMD9O00233 223 aa18.8■□□□□ 0.6
TPM1-204ENST00000334895 TMCC2O75069 709 aa18.8■□□□□ 0.6
TPM1-204ENST00000334895 ZNF32P17041 273 aa18.8■□□□□ 0.6
TPM1-204ENST00000334895 TUBA1BP68363 451 aa18.8■□□□□ 0.6
TPM1-204ENST00000334895 TUBA4AP68366 448 aa18.8■□□□□ 0.6
TPM1-204ENST00000334895 TBCEQ15813 527 aaPredicted RBP18.8■□□□□ 0.6
TPM1-204ENST00000334895 XAF1Q6GPH4 301 aa18.8■□□□□ 0.6
TPM1-204ENST00000334895 TUBA1AQ71U36 451 aa18.8■□□□□ 0.6
TPM1-204ENST00000334895 OR52N5Q8NH56 324 aa18.8■□□□□ 0.6
TPM1-204ENST00000334895 ISG20L2Q9H9L3 353 aaKnown RBP18.8■□□□□ 0.6
TPM1-204ENST00000334895 ACOT13Q9NPJ3 140 aa18.8■□□□□ 0.6
TPM1-204ENST00000334895 ERRFI1Q9UJM3 462 aaPredicted RBP18.8■□□□□ 0.6
TPM1-204ENST00000334895 LSM2Q9Y333 95 aaKnown RBP18.8■□□□□ 0.6
TPM1-204ENST00000334895 TMEM129A0AVI4 362 aa18.79■□□□□ 0.6
TPM1-204ENST00000334895 HLA-HP01893 362 aa18.79■□□□□ 0.6
TPM1-204ENST00000334895 FAM27E3Q08E93 113 aa18.79■□□□□ 0.6
TPM1-204ENST00000334895 CDONQ4KMG0 1287 aa18.79■□□□□ 0.6
TPM1-204ENST00000334895 TMEM154Q6P9G4 183 aa18.79■□□□□ 0.6
TPM1-204ENST00000334895 SPATC1Q76KD6 591 aa18.79■□□□□ 0.6
TPM1-204ENST00000334895 BHLHA15Q7RTS1 189 aaPredicted RBP18.79■□□□□ 0.6
TPM1-204ENST00000334895 OR2AJ1Q8NGZ0 328 aa18.79■□□□□ 0.6
TPM1-204ENST00000334895 C1orf198Q9H425 327 aa18.79■□□□□ 0.6
TPM1-204ENST00000334895 SLCO1C1Q9NYB5 712 aa18.79■□□□□ 0.6
TPM1-204ENST00000334895 MRM2Q9UI43 246 aaKnown RBP18.79■□□□□ 0.6
TPM1-204ENST00000334895 TENM4Q6N022 2769 aa18.79■□□□□ 0.6
TPM1-204ENST00000334895 FLNCQ14315 2725 aa18.79■□□□□ 0.6
TPM1-204ENST00000334895 LCKP06239 509 aa18.78■□□□□ 0.6
TPM1-204ENST00000334895 PSMB1P20618 241 aaKnown RBP18.78■□□□□ 0.6
TPM1-204ENST00000334895 CCKARP32238 428 aa18.78■□□□□ 0.6
TPM1-204ENST00000334895 OR12D2P58182 307 aa18.78■□□□□ 0.6
TPM1-204ENST00000334895 TP53I3Q53FA7 332 aa18.78■□□□□ 0.6
TPM1-204ENST00000334895 CCDC92Q53HC0 331 aaPredicted RBP18.78■□□□□ 0.6
TPM1-204ENST00000334895 KCTD8Q6ZWB6 473 aa18.78■□□□□ 0.6
TPM1-204ENST00000334895 WDR31Q8NA23 367 aa18.78■□□□□ 0.6
TPM1-204ENST00000334895 RNF133Q8WVZ7 376 aa18.78■□□□□ 0.6
TPM1-204ENST00000334895 SLAMF6Q96DU3 332 aa18.78■□□□□ 0.6
TPM1-204ENST00000334895 OR5M11Q96RB7 305 aa18.78■□□□□ 0.6
TPM1-204ENST00000334895 OR8B4Q96RC9 309 aa18.78■□□□□ 0.6
TPM1-204ENST00000334895 GALNT8Q9NY28 637 aa18.78■□□□□ 0.6
TPM1-204ENST00000334895 B3GNT2Q9NY97 397 aa18.78■□□□□ 0.6
TPM1-204ENST00000334895 COQ3Q9NZJ6 369 aa18.78■□□□□ 0.6
TPM1-204ENST00000334895 ERGIC3Q9Y282 383 aa18.78■□□□□ 0.6
TPM1-204ENST00000334895 PHYHO14832 338 aa18.78■□□□□ 0.6
TPM1-204ENST00000334895 MYL12BO14950 172 aa18.78■□□□□ 0.6
TPM1-204ENST00000334895 ABHD16AO95870 558 aa18.78■□□□□ 0.6
TPM1-204ENST00000334895 PSG4Q00888 419 aa18.78■□□□□ 0.6
TPM1-204ENST00000334895 ROM1Q03395 351 aa18.78■□□□□ 0.6
TPM1-204ENST00000334895 EGR3Q06889 387 aa18.78■□□□□ 0.6
TPM1-204ENST00000334895 SLC25A35Q3KQZ1 300 aa18.78■□□□□ 0.6
TPM1-204ENST00000334895 OR7E24Q6IFN5 339 aa18.78■□□□□ 0.6
TPM1-204ENST00000334895 LRRN1Q6UXK5 716 aa18.78■□□□□ 0.6
TPM1-204ENST00000334895 SYT9Q86SS6 491 aa18.78■□□□□ 0.6
TPM1-204ENST00000334895 KLHL36Q8N4N3 616 aa18.78■□□□□ 0.6
TPM1-204ENST00000334895 SVOPQ8N4V2 548 aa18.78■□□□□ 0.6
TPM1-204ENST00000334895 GJC3Q8NFK1 279 aa18.78■□□□□ 0.6
TPM1-204ENST00000334895 OR52N1Q8NH53 320 aa18.78■□□□□ 0.6
TPM1-204ENST00000334895 LILRB4Q8NHJ6 448 aa18.78■□□□□ 0.6
TPM1-204ENST00000334895 ASB5Q8WWX0 329 aa18.78■□□□□ 0.6
TPM1-204ENST00000334895 ASB17Q8WXJ9 295 aa18.78■□□□□ 0.6
TPM1-204ENST00000334895 C4orf36Q96KX1 117 aa18.78■□□□□ 0.6
TPM1-204ENST00000334895 MND1Q9BWT6 205 aa18.78■□□□□ 0.6
TPM1-204ENST00000334895 MRPS26Q9BYN8 205 aaKnown RBP18.78■□□□□ 0.6
TPM1-204ENST00000334895 OR2H1Q9GZK4 316 aa18.78■□□□□ 0.6
TPM1-204ENST00000334895 SLC17A5Q9NRA2 495 aa18.78■□□□□ 0.6
TPM1-204ENST00000334895 CHCHD3Q9NX63 227 aaKnown RBP18.78■□□□□ 0.6
TPM1-204ENST00000334895 ELOVL5Q9NYP7 299 aa18.78■□□□□ 0.6
TPM1-204ENST00000334895 CAB39Q9Y376 341 aaPredicted RBP18.78■□□□□ 0.6
TPM1-204ENST00000334895 A0A1W2PR80 420 aa18.77■□□□□ 0.6
TPM1-204ENST00000334895 FAM90A27PA6NNH2 459 aa18.77■□□□□ 0.6
TPM1-204ENST00000334895 OPRL1P41146 370 aa18.77■□□□□ 0.6
TPM1-204ENST00000334895 SLC36A2Q495M3 483 aa18.77■□□□□ 0.6
TPM1-204ENST00000334895 SNX33Q8WV41 574 aa18.77■□□□□ 0.6
TPM1-204ENST00000334895 SPRYD4Q8WW59 207 aaPredicted RBP18.77■□□□□ 0.6
TPM1-204ENST00000334895 WACQ9BTA9 647 aa18.77■□□□□ 0.6
TPM1-204ENST00000334895 WNT5BQ9H1J7 359 aa18.77■□□□□ 0.6
TPM1-204ENST00000334895 TIMM10BQ9Y5J6 103 aa18.77■□□□□ 0.6
TPM1-204ENST00000334895 LALBAP00709 142 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms