RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 MSRB3Q8IXL7 192 aa13.59□□□□□ -0.23
C9orf47-201ENST00000334490 OR52N5Q8NH56 324 aa13.59□□□□□ -0.23
C9orf47-201ENST00000334490 TIMD4Q96H15 378 aa13.59□□□□□ -0.23
C9orf47-201ENST00000334490 SLC25A19Q9HC21 320 aa13.59□□□□□ -0.23
C9orf47-201ENST00000334490 CCDC163A0A0D9SF12 145 aa13.59□□□□□ -0.23
C9orf47-201ENST00000334490 ALG1L2C9J202 215 aa13.59□□□□□ -0.23
C9orf47-201ENST00000334490 HOXB5P09067 269 aa13.59□□□□□ -0.23
C9orf47-201ENST00000334490 PIPP12273 146 aaPredicted RBP13.59□□□□□ -0.23
C9orf47-201ENST00000334490 TIAL1Q01085 375 aaKnown RBP eCLIP13.59□□□□□ -0.23
C9orf47-201ENST00000334490 CATR1Q13166 79 aa13.59□□□□□ -0.23
C9orf47-201ENST00000334490 GDPD3Q7L5L3 318 aa13.59□□□□□ -0.23
C9orf47-201ENST00000334490 LACC1Q8IV20 430 aa13.59□□□□□ -0.23
C9orf47-201ENST00000334490 SMAP2Q8WU79 429 aaPredicted RBP13.59□□□□□ -0.23
C9orf47-201ENST00000334490 ARHGDIGQ99819 225 aa13.59□□□□□ -0.23
C9orf47-201ENST00000334490 TEX51A0A1B0GUA7 166 aa13.59□□□□□ -0.23
C9orf47-201ENST00000334490 F5H5P2 479 aa13.59□□□□□ -0.23
C9orf47-201ENST00000334490 AGFG1P52594 562 aaKnown RBP13.59□□□□□ -0.23
C9orf47-201ENST00000334490 GPR157Q5UAW9 335 aa13.59□□□□□ -0.23
C9orf47-201ENST00000334490 AADACL3Q5VUY0 350 aa13.59□□□□□ -0.23
C9orf47-201ENST00000334490 B3GNTL1Q67FW5 361 aaPredicted RBP13.59□□□□□ -0.23
C9orf47-201ENST00000334490 TIGD3Q6B0B8 471 aa13.59□□□□□ -0.23
C9orf47-201ENST00000334490 DESI1Q6ICB0 168 aa13.59□□□□□ -0.23
C9orf47-201ENST00000334490 GPR84Q9NQS5 396 aa13.59□□□□□ -0.23
C9orf47-201ENST00000334490 KCNG2Q9UJ96 466 aa13.59□□□□□ -0.23
C9orf47-201ENST00000334490 IFNA2P01563 188 aa13.59□□□□□ -0.23
C9orf47-201ENST00000334490 EBPQ15125 230 aaKnown RBP13.59□□□□□ -0.23
C9orf47-201ENST00000334490 ZNF74Q16587 644 aa13.59□□□□□ -0.23
C9orf47-201ENST00000334490 ADGRE4PQ86SQ3 457 aa13.59□□□□□ -0.23
C9orf47-201ENST00000334490 RDH10Q8IZV5 341 aa13.59□□□□□ -0.23
C9orf47-201ENST00000334490 C12orf45Q8N5I9 185 aaPredicted RBP13.59□□□□□ -0.23
C9orf47-201ENST00000334490 DEFB108BQ8NET1 73 aa13.59□□□□□ -0.23
C9orf47-201ENST00000334490 ZNF285Q96NJ3 590 aa13.59□□□□□ -0.23
C9orf47-201ENST00000334490 OR51J1Q9H342 316 aa13.59□□□□□ -0.23
C9orf47-201ENST00000334490 RAB22AQ9UL26 194 aa13.59□□□□□ -0.23
C9orf47-201ENST00000334490 A4GNTQ9UNA3 340 aa13.59□□□□□ -0.23
C9orf47-201ENST00000334490 ARRDC5A6NEK1 342 aa13.58□□□□□ -0.24
C9orf47-201ENST00000334490 NDUFB7P17568 137 aa13.58□□□□□ -0.24
C9orf47-201ENST00000334490 LGALS4P56470 323 aa13.58□□□□□ -0.24
C9orf47-201ENST00000334490 CTU2Q2VPK5 515 aaKnown RBP13.58□□□□□ -0.24
C9orf47-201ENST00000334490 CPEB3Q8NE35 698 aaKnown RBP13.58□□□□□ -0.24
C9orf47-201ENST00000334490 RNF128Q8TEB7 428 aa13.58□□□□□ -0.24
C9orf47-201ENST00000334490 DCUN1D4Q92564 292 aa13.58□□□□□ -0.24
C9orf47-201ENST00000334490 C3orf49Q96BT1 292 aa13.58□□□□□ -0.24
C9orf47-201ENST00000334490 DPCDQ9BVM2 203 aaPredicted RBP13.58□□□□□ -0.24
C9orf47-201ENST00000334490 BANF2Q9H503 90 aa13.58□□□□□ -0.24
C9orf47-201ENST00000334490 MOB1AQ9H8S9 216 aa13.58□□□□□ -0.24
C9orf47-201ENST00000334490 PRMT8Q9NR22 394 aaPredicted RBP13.58□□□□□ -0.24
C9orf47-201ENST00000334490 B9D1Q9UPM9 204 aa13.58□□□□□ -0.24
C9orf47-201ENST00000334490 A0A0B4J2E0 115 aa13.58□□□□□ -0.24
C9orf47-201ENST00000334490 LOC100289279A0A1B0GTE1 492 aa13.58□□□□□ -0.24
C9orf47-201ENST00000334490 A0A1B0GX12 115 aa13.58□□□□□ -0.24
C9orf47-201ENST00000334490 GDNFP39905 211 aa13.58□□□□□ -0.24
C9orf47-201ENST00000334490 HACD4Q5VWC8 232 aa13.58□□□□□ -0.24
C9orf47-201ENST00000334490 HAGHLQ6PII5 290 aaPredicted RBP13.58□□□□□ -0.24
C9orf47-201ENST00000334490 GCNT2Q8N0V5 402 aa13.58□□□□□ -0.24
C9orf47-201ENST00000334490 OR52H1Q8NGJ2 320 aa13.58□□□□□ -0.24
C9orf47-201ENST00000334490 SIGLEC11Q96RL6 698 aa13.58□□□□□ -0.24
C9orf47-201ENST00000334490 UCK1Q9HA47 277 aa13.58□□□□□ -0.24
C9orf47-201ENST00000334490 ARPC5O15511 151 aa13.58□□□□□ -0.24
C9orf47-201ENST00000334490 ENSAO43768 121 aaKnown RBP13.58□□□□□ -0.24
C9orf47-201ENST00000334490 IFNA17P01571 189 aa13.58□□□□□ -0.24
C9orf47-201ENST00000334490 HLA-AP01891 365 aaKnown RBP13.58□□□□□ -0.24
C9orf47-201ENST00000334490 ALDOBP05062 364 aa13.58□□□□□ -0.24
C9orf47-201ENST00000334490 SLC9A3R2Q15599 337 aa13.58□□□□□ -0.24
C9orf47-201ENST00000334490 ACTBL2Q562R1 376 aa13.58□□□□□ -0.24
C9orf47-201ENST00000334490 STPG1Q5TH74 334 aa13.58□□□□□ -0.24
C9orf47-201ENST00000334490 FAHD1Q6P587 224 aa13.58□□□□□ -0.24
C9orf47-201ENST00000334490 KLHDC8BQ8IXV7 354 aa13.58□□□□□ -0.24
C9orf47-201ENST00000334490 BEST4Q8NFU0 473 aa13.58□□□□□ -0.24
C9orf47-201ENST00000334490 TMEM246Q9BRR3 403 aa13.58□□□□□ -0.24
C9orf47-201ENST00000334490 ZNF385DQ9H6B1 395 aa13.58□□□□□ -0.24
C9orf47-201ENST00000334490 MMP25Q9NPA2 562 aa13.58□□□□□ -0.24
C9orf47-201ENST00000334490 TAS2R4Q9NYW5 299 aa13.58□□□□□ -0.24
C9orf47-201ENST00000334490 TAS2R3Q9NYW6 316 aa13.58□□□□□ -0.24
C9orf47-201ENST00000334490 A0A1B0GV50 99 aa13.57□□□□□ -0.24
C9orf47-201ENST00000334490 A0A1W2PPV9 198 aa13.57□□□□□ -0.24
C9orf47-201ENST00000334490 DEGS1O15121 323 aa13.57□□□□□ -0.24
C9orf47-201ENST00000334490 SOD1P00441 154 aa13.57□□□□□ -0.24
C9orf47-201ENST00000334490 APEX1P27695 318 aaKnown RBP13.57□□□□□ -0.24
C9orf47-201ENST00000334490 EPHA2P29317 976 aa13.57□□□□□ -0.24
C9orf47-201ENST00000334490 WDR88Q6ZMY6 472 aa13.57□□□□□ -0.24
C9orf47-201ENST00000334490 PHC2Q8IXK0 858 aa13.57□□□□□ -0.24
C9orf47-201ENST00000334490 HYLS1Q96M11 299 aa13.57□□□□□ -0.24
C9orf47-201ENST00000334490 TDRD15B5MCY1 1934 aaKnown RBP13.57□□□□□ -0.24
C9orf47-201ENST00000334490 CEBPZOSA8MTT3 80 aa13.57□□□□□ -0.24
C9orf47-201ENST00000334490 ZNF732B4DXR9 585 aa13.57□□□□□ -0.24
C9orf47-201ENST00000334490 UBL3O95164 117 aa13.57□□□□□ -0.24
C9orf47-201ENST00000334490 GSTP1P09211 210 aaKnown RBP13.57□□□□□ -0.24
C9orf47-201ENST00000334490 INSM1Q01101 510 aaPredicted RBP13.57□□□□□ -0.24
C9orf47-201ENST00000334490 FZD5Q13467 585 aa13.57□□□□□ -0.24
C9orf47-201ENST00000334490 ZNF718Q3SXZ3 478 aa13.57□□□□□ -0.24
C9orf47-201ENST00000334490 OPALINQ96PE5 141 aa13.57□□□□□ -0.24
C9orf47-201ENST00000334490 TRIM64BA6NI03 449 aa13.57□□□□□ -0.24
C9orf47-201ENST00000334490 H7C2Y5 167 aa13.57□□□□□ -0.24
C9orf47-201ENST00000334490 PMPCAQ10713 525 aa13.57□□□□□ -0.24
C9orf47-201ENST00000334490 SOWAHCQ53LP3 525 aaPredicted RBP13.57□□□□□ -0.24
C9orf47-201ENST00000334490 IDO2Q6ZQW0 420 aa13.57□□□□□ -0.24
C9orf47-201ENST00000334490 DNAJC5GQ8N7S2 189 aa13.57□□□□□ -0.24
C9orf47-201ENST00000334490 FOXB1Q99853 325 aa13.57□□□□□ -0.24
C9orf47-201ENST00000334490 TMEM43Q9BTV4 400 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms