RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 IL2RGP31785 369 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 OR1D4P47884 311 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 LMAN1P49257 510 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 S100A12P80511 92 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 IFFO1Q0D2I5 559 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 CUL1Q13616 776 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 LAGE3Q14657 143 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 WHAMMP3Q1A5X7 153 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 KRTAP20-1Q3LI63 56 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 KRTAP19-6Q3LI70 58 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 TTMPQ5BVD1 217 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 WDR38Q5JTN6 314 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 ALKBH5Q6P6C2 394 aaKnown RBP1.17□□□□□ -2.22
LINC00643-201ENST00000334389 TRAT1Q6PIZ9 186 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 C5orf24Q7Z6I8 188 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 GPR180Q86V85 440 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 TRAPPC5Q8IUR0 188 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 KRT222Q8N1A0 295 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 ABHD12Q8N2K0 398 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 ZNF561Q8N587 486 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 NAT8LQ8N9F0 302 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 SLC24A4Q8NFF2 622 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 OR56A1Q8NGH5 318 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 OR4L1Q8NH43 312 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 ZFP28Q8NHY6 868 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 SLC25A40Q8TBP6 338 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 RPS4Y2Q8TD47 263 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 SLC13A3Q8WWT9 602 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 TAAR8Q969N4 342 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 CCDC126Q96EE4 140 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 L3HYPDHQ96EM0 354 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 TSPAN17Q96FV3 270 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 USMG5Q96IX5 58 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 PAIP2Q9BPZ3 127 aaKnown RBP1.17□□□□□ -2.22
LINC00643-201ENST00000334389 ROPN1BQ9BZX4 212 aaPredicted RBP1.17□□□□□ -2.22
LINC00643-201ENST00000334389 FAM192AQ9GZU8 254 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 HEXA-AS1Q9H8Q6 139 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 ROPN1Q9HAT0 212 aaPredicted RBP1.17□□□□□ -2.22
LINC00643-201ENST00000334389 ETNK2Q9NVF9 386 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 FLRT3Q9NZU0 649 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 KLHL20Q9Y2M5 609 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 FRYLO94915 3013 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 ESPL1Q14674 2120 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 TRAV38-1A0A0B4J264 116 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 EFCAB10A6NFE3 127 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 LRRC53A6NM62 1247 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 A8MVM7 634 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 F8WDY8 70 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 MS4A18H0YCH9 400 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 PLPP3O14495 311 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 TNFSF11O14788 317 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 PPIHO43447 177 aaKnown RBP1.17□□□□□ -2.22
LINC00643-201ENST00000334389 OR2T1O43869 369 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 MFSD11O43934 449 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 FTLP02792 175 aaPredicted RBP1.17□□□□□ -2.22
LINC00643-201ENST00000334389 OPN1SWP03999 348 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 HSPB1P04792 205 aaKnown RBP1.17□□□□□ -2.22
LINC00643-201ENST00000334389 LGALS1P09382 135 aaKnown RBP1.17□□□□□ -2.22
LINC00643-201ENST00000334389 SPP1P10451 314 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 PNMTP11086 282 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 UQCRBP14927 111 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 IL1RNP18510 177 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 CD1BP29016 333 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 CRABP2P29373 138 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 TIA1P31483 386 aaKnown RBP eCLIP1.17□□□□□ -2.22
LINC00643-201ENST00000334389 KIR2DS2P43631 304 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 VDAC2P45880 294 aaPredicted RBP1.17□□□□□ -2.22
LINC00643-201ENST00000334389 CDH12P55289 794 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 CKAP4Q07065 602 aaKnown RBP1.17□□□□□ -2.22
LINC00643-201ENST00000334389 KLHL30Q0D2K2 578 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 PJVKQ0ZLH3 352 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 POU6F1Q14863 301 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 EXOSC7Q15024 291 aaKnown RBP1.17□□□□□ -2.22
LINC00643-201ENST00000334389 TRADDQ15628 312 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 MAPK14Q16539 360 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 MS4A18Q3C1V0 323 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 LDLRAD2Q5SZI1 272 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 SPATA46Q5T0L3 261 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 FAM27BQ5VT28 67 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 ZNF660Q6AZW8 331 aaPredicted RBP1.17□□□□□ -2.22
LINC00643-201ENST00000334389 ZYG11AQ6WRX3 759 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 IL34Q6ZMJ4 242 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 SPATC1Q76KD6 591 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 TRMT10CQ7L0Y3 403 aaKnown RBP1.17□□□□□ -2.22
LINC00643-201ENST00000334389 CHMP1BQ7LBR1 199 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 CLNKQ7Z7G1 428 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 CDH26Q8IXH8 852 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 OR10G3Q8NGC4 313 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 OR4K14Q8NGD5 310 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 EPS8L3Q8TE67 593 aaKnown RBP1.17□□□□□ -2.22
LINC00643-201ENST00000334389 NRGNQ92686 78 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 PEX11GQ96HA9 241 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 POM121L2Q96KW2 1035 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 CCDC42Q96M95 316 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 CPPED1Q9BRF8 314 aaPredicted RBP1.17□□□□□ -2.22
LINC00643-201ENST00000334389 CENPKQ9BS16 269 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 DOHHQ9BU89 302 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 MRPL13Q9BYD1 178 aaKnown RBP1.17□□□□□ -2.22
LINC00643-201ENST00000334389 PKIBQ9C010 78 aa1.17□□□□□ -2.22
LINC00643-201ENST00000334389 Q9H3A6 140 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms