RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 CORO6Q6QEF8 472 aa13.01□□□□□ -0.33
TPM3-206ENST00000330188 NHLRC1Q6VVB1 395 aa13.01□□□□□ -0.33
TPM3-206ENST00000330188 BPHLQ86WA6 291 aaPredicted RBP13.01□□□□□ -0.33
TPM3-206ENST00000330188 OR51A2Q8NGJ7 313 aa13.01□□□□□ -0.33
TPM3-206ENST00000330188 OR4C16Q8NGL9 310 aa13.01□□□□□ -0.33
TPM3-206ENST00000330188 OR13C3Q8NGS6 347 aa13.01□□□□□ -0.33
TPM3-206ENST00000330188 EMC6Q9BV81 110 aa13.01□□□□□ -0.33
TPM3-206ENST00000330188 SLC26A1Q9H2B4 701 aa13.01□□□□□ -0.33
TPM3-206ENST00000330188 METTL17Q9H7H0 456 aaPredicted RBP13.01□□□□□ -0.33
TPM3-206ENST00000330188 METTL7AQ9H8H3 244 aa13.01□□□□□ -0.33
TPM3-206ENST00000330188 B3GAT1Q9P2W7 334 aa13.01□□□□□ -0.33
TPM3-206ENST00000330188 LOC101059948A0A1B0GTJ6 334 aa13□□□□□ -0.33
TPM3-206ENST00000330188 A0A1W2PQ72 361 aa13□□□□□ -0.33
TPM3-206ENST00000330188 IL5P05113 134 aa13□□□□□ -0.33
TPM3-206ENST00000330188 CSF1P09603 554 aa13□□□□□ -0.33
TPM3-206ENST00000330188 HTR2CP28335 458 aa13□□□□□ -0.33
TPM3-206ENST00000330188 FAUP35544 74 aaKnown RBP13□□□□□ -0.33
TPM3-206ENST00000330188 PER3P56645 1201 aa13□□□□□ -0.33
TPM3-206ENST00000330188 MYBPHQ13203 477 aa13□□□□□ -0.33
TPM3-206ENST00000330188 TOMM20Q15388 145 aa13□□□□□ -0.33
TPM3-206ENST00000330188 INPP5JQ15735 1006 aaPredicted RBP13□□□□□ -0.33
TPM3-206ENST00000330188 PMS2CLQ68D20 193 aa13□□□□□ -0.33
TPM3-206ENST00000330188 DEGS2Q6QHC5 323 aa13□□□□□ -0.33
TPM3-206ENST00000330188 RNF133Q8WVZ7 376 aa13□□□□□ -0.33
TPM3-206ENST00000330188 MED30Q96HR3 178 aa13□□□□□ -0.33
TPM3-206ENST00000330188 CMKLR1Q99788 373 aa13□□□□□ -0.33
TPM3-206ENST00000330188 AKIRIN1Q9H9L7 192 aaPredicted RBP13□□□□□ -0.33
TPM3-206ENST00000330188 OCIAD1Q9NX40 245 aa13□□□□□ -0.33
TPM3-206ENST00000330188 TAS2R8Q9NYW2 309 aa13□□□□□ -0.33
TPM3-206ENST00000330188 CGGBP1Q9UFW8 167 aaPredicted RBP13□□□□□ -0.33
TPM3-206ENST00000330188 TMEM269A0A1B0GVZ9 245 aa13□□□□□ -0.33
TPM3-206ENST00000330188 LMX1BO60663 402 aa13□□□□□ -0.33
TPM3-206ENST00000330188 DKK1O94907 266 aa13□□□□□ -0.33
TPM3-206ENST00000330188 TPOP07202 933 aa13□□□□□ -0.33
TPM3-206ENST00000330188 CPN1P15169 458 aa13□□□□□ -0.33
TPM3-206ENST00000330188 DNASE1L1P49184 302 aa13□□□□□ -0.33
TPM3-206ENST00000330188 GNG2P59768 71 aa13□□□□□ -0.33
TPM3-206ENST00000330188 GLYATL3Q5SZD4 288 aa13□□□□□ -0.33
TPM3-206ENST00000330188 ZBTB37Q5TC79 503 aa13□□□□□ -0.33
TPM3-206ENST00000330188 MRPL14Q6P1L8 145 aaKnown RBP13□□□□□ -0.33
TPM3-206ENST00000330188 ZNF704Q6ZNC4 412 aaPredicted RBP13□□□□□ -0.33
TPM3-206ENST00000330188 OR2T35Q8NGX2 323 aa13□□□□□ -0.33
TPM3-206ENST00000330188 SLC22A8Q8TCC7 542 aa13□□□□□ -0.33
TPM3-206ENST00000330188 C11orf40Q8WZ69 217 aa13□□□□□ -0.33
TPM3-206ENST00000330188 MRPL13Q9BYD1 178 aaKnown RBP13□□□□□ -0.33
TPM3-206ENST00000330188 ATG5Q9H1Y0 275 aa13□□□□□ -0.33
TPM3-206ENST00000330188 SDHAF3Q9NRP4 125 aa13□□□□□ -0.33
TPM3-206ENST00000330188 C19orf25Q9UFG5 118 aaPredicted RBP13□□□□□ -0.33
TPM3-206ENST00000330188 PILRBQ9UKJ0 227 aa13□□□□□ -0.33
TPM3-206ENST00000330188 ELF5Q9UKW6 265 aaPredicted RBP13□□□□□ -0.33
TPM3-206ENST00000330188 RPH3AQ9Y2J0 694 aaPredicted RBP13□□□□□ -0.33
TPM3-206ENST00000330188 MRPS18BQ9Y676 258 aaKnown RBP13□□□□□ -0.33
TPM3-206ENST00000330188 MEN1O00255 615 aa12.99□□□□□ -0.33
TPM3-206ENST00000330188 H2BFMP0C1H6 154 aa12.99□□□□□ -0.33
TPM3-206ENST00000330188 PRSS3P35030 304 aa12.99□□□□□ -0.33
TPM3-206ENST00000330188 RBMS2Q15434 407 aaKnown RBP12.99□□□□□ -0.33
TPM3-206ENST00000330188 CSRP2Q16527 193 aa12.99□□□□□ -0.33
TPM3-206ENST00000330188 LGALSLQ3ZCW2 172 aaPredicted RBP12.99□□□□□ -0.33
TPM3-206ENST00000330188 ZNF626Q68DY1 528 aa12.99□□□□□ -0.33
TPM3-206ENST00000330188 SPICQ8N5J4 248 aa12.99□□□□□ -0.33
TPM3-206ENST00000330188 OR2M3Q8NG83 312 aa12.99□□□□□ -0.33
TPM3-206ENST00000330188 OR8H1Q8NGG4 311 aa12.99□□□□□ -0.33
TPM3-206ENST00000330188 OR4D10Q8NGI6 311 aa12.99□□□□□ -0.33
TPM3-206ENST00000330188 OR6M1Q8NGM8 313 aa12.99□□□□□ -0.33
TPM3-206ENST00000330188 RASL10BQ96S79 203 aa12.99□□□□□ -0.33
TPM3-206ENST00000330188 HEXA-AS1Q9H8Q6 139 aa12.99□□□□□ -0.33
TPM3-206ENST00000330188 CENPMQ9NSP4 180 aa12.99□□□□□ -0.33
TPM3-206ENST00000330188 FBXL2Q9UKC9 423 aa12.99□□□□□ -0.33
TPM3-206ENST00000330188 PHF3Q92576 2039 aaKnown RBP12.98□□□□□ -0.33
TPM3-206ENST00000330188 MEIS3P1A6NDR6 274 aa12.98□□□□□ -0.33
TPM3-206ENST00000330188 PYCARD-AS1I3L0S3 204 aa12.98□□□□□ -0.33
TPM3-206ENST00000330188 EIF1AYO14602 144 aaKnown RBP12.98□□□□□ -0.33
TPM3-206ENST00000330188 CREBL2O60519 120 aaPredicted RBP12.98□□□□□ -0.33
TPM3-206ENST00000330188 UBCP0CG48 685 aaKnown RBP12.98□□□□□ -0.33
TPM3-206ENST00000330188 P2RY4P51582 365 aa12.98□□□□□ -0.33
TPM3-206ENST00000330188 FOXK1P85037 733 aa12.98□□□□□ -0.33
TPM3-206ENST00000330188 SPOCK1Q08629 439 aa12.98□□□□□ -0.33
TPM3-206ENST00000330188 TMEM244Q5VVB8 128 aa12.98□□□□□ -0.33
TPM3-206ENST00000330188 C3orf33Q6P1S2 294 aa12.98□□□□□ -0.33
TPM3-206ENST00000330188 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.98□□□□□ -0.33
TPM3-206ENST00000330188 GPX8Q8TED1 209 aa12.98□□□□□ -0.33
TPM3-206ENST00000330188 NAT6Q93015 286 aa12.98□□□□□ -0.33
TPM3-206ENST00000330188 GPN1Q9HCN4 374 aaPredicted RBP12.98□□□□□ -0.33
TPM3-206ENST00000330188 MGAT4CQ9UBM8 478 aa12.98□□□□□ -0.33
TPM3-206ENST00000330188 ZNF69Q9UC07 566 aa12.98□□□□□ -0.33
TPM3-206ENST00000330188 DCDC2BA2VCK2 349 aa12.98□□□□□ -0.33
TPM3-206ENST00000330188 MEGF11A6BM72 1044 aa12.98□□□□□ -0.33
TPM3-206ENST00000330188 SNRPGP15A8MWD9 76 aa12.98□□□□□ -0.33
TPM3-206ENST00000330188 P2RY10O00398 339 aa12.98□□□□□ -0.33
TPM3-206ENST00000330188 LDLRAD4O15165 306 aa12.98□□□□□ -0.33
TPM3-206ENST00000330188 OPN1LWP04000 364 aa12.98□□□□□ -0.33
TPM3-206ENST00000330188 GTF2F2P13984 249 aa12.98□□□□□ -0.33
TPM3-206ENST00000330188 MMP16P51512 607 aa12.98□□□□□ -0.33
TPM3-206ENST00000330188 PHF19Q5T6S3 580 aa12.98□□□□□ -0.33
TPM3-206ENST00000330188 TEX261Q6UWH6 196 aa12.98□□□□□ -0.33
TPM3-206ENST00000330188 LYPD6Q86Y78 171 aa12.98□□□□□ -0.33
TPM3-206ENST00000330188 MEIOBQ8N635 442 aa12.98□□□□□ -0.33
TPM3-206ENST00000330188 ADPRHL1Q8NDY3 354 aa12.98□□□□□ -0.33
TPM3-206ENST00000330188 OR5M1Q8NGP8 315 aa12.98□□□□□ -0.33
TPM3-206ENST00000330188 SLAMF6Q96DU3 332 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms