RNA–Protein interactions for RNA: ENST00000326828.5

CHRNA3-201, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA3, Length 3,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-201ENST00000326828 PPT1P50897 306 aa12.89□□□□□ -0.35
CHRNA3-201ENST00000326828 ELAVL1Q15717 326 aaKnown RBP12.89□□□□□ -0.35
CHRNA3-201ENST00000326828 CD226Q15762 336 aa12.89□□□□□ -0.35
CHRNA3-201ENST00000326828 OR4K17Q8NGC6 315 aa12.89□□□□□ -0.35
CHRNA3-201ENST00000326828 OR5AP2Q8NGF4 316 aa12.89□□□□□ -0.35
CHRNA3-201ENST00000326828 ANKRD9Q96BM1 317 aaPredicted RBP12.89□□□□□ -0.35
CHRNA3-201ENST00000326828 DCBLD2Q96PD2 775 aa12.89□□□□□ -0.35
CHRNA3-201ENST00000326828 A0A1B0GV50 99 aa12.88□□□□□ -0.35
CHRNA3-201ENST00000326828 SERINC4A6NH21 518 aa12.88□□□□□ -0.35
CHRNA3-201ENST00000326828 SLC17A2O00624 439 aa12.88□□□□□ -0.35
CHRNA3-201ENST00000326828 ADAP1O75689 374 aa12.88□□□□□ -0.35
CHRNA3-201ENST00000326828 KAT7O95251 611 aa12.88□□□□□ -0.35
CHRNA3-201ENST00000326828 IFNA6P05013 189 aa12.88□□□□□ -0.35
CHRNA3-201ENST00000326828 NME2P22392 152 aa12.88□□□□□ -0.35
CHRNA3-201ENST00000326828 SDHAP31040 664 aa12.88□□□□□ -0.35
CHRNA3-201ENST00000326828 ASPHD2Q6ICH7 369 aa12.88□□□□□ -0.35
CHRNA3-201ENST00000326828 CDC20BQ86Y33 519 aa12.88□□□□□ -0.35
CHRNA3-201ENST00000326828 GLYATL2Q8WU03 294 aa12.88□□□□□ -0.35
CHRNA3-201ENST00000326828 C14orf79Q96F83 325 aa12.88□□□□□ -0.35
CHRNA3-201ENST00000326828 OR2M4Q96R27 311 aa12.88□□□□□ -0.35
CHRNA3-201ENST00000326828 SLC25A21Q9BQT8 299 aaPredicted RBP12.88□□□□□ -0.35
CHRNA3-201ENST00000326828 SLC19A3Q9BZV2 496 aa12.88□□□□□ -0.35
CHRNA3-201ENST00000326828 ZNF304Q9HCX3 659 aa12.88□□□□□ -0.35
CHRNA3-201ENST00000326828 Q9N2J8 555 aa12.88□□□□□ -0.35
CHRNA3-201ENST00000326828 OR5K4A6NMS3 321 aa12.88□□□□□ -0.35
CHRNA3-201ENST00000326828 METTL12A8MUP2 240 aa12.88□□□□□ -0.35
CHRNA3-201ENST00000326828 XKRYO14609 159 aa12.88□□□□□ -0.35
CHRNA3-201ENST00000326828 STK17BO94768 372 aa12.88□□□□□ -0.35
CHRNA3-201ENST00000326828 RENP00797 406 aa12.88□□□□□ -0.35
CHRNA3-201ENST00000326828 ELOCQ15369 112 aa12.88□□□□□ -0.35
CHRNA3-201ENST00000326828 SMAD2Q15796 467 aaKnown RBP12.88□□□□□ -0.35
CHRNA3-201ENST00000326828 GFOD2Q3B7J2 385 aa12.88□□□□□ -0.35
CHRNA3-201ENST00000326828 TMEM225Q6GV28 225 aa12.88□□□□□ -0.35
CHRNA3-201ENST00000326828 FJX1Q86VR8 437 aa12.88□□□□□ -0.35
CHRNA3-201ENST00000326828 OR4A4PQ8NGN8 299 aa12.88□□□□□ -0.35
CHRNA3-201ENST00000326828 STOML3Q8TAV4 291 aa12.88□□□□□ -0.35
CHRNA3-201ENST00000326828 PHB2Q99623 299 aa12.88□□□□□ -0.35
CHRNA3-201ENST00000326828 KIR3DX1Q9H7L2 352 aa12.88□□□□□ -0.35
CHRNA3-201ENST00000326828 SPAG17Q6Q759 2223 aa12.88□□□□□ -0.35
CHRNA3-201ENST00000326828 MEX3AA1L020 520 aaKnown RBP12.88□□□□□ -0.35
CHRNA3-201ENST00000326828 MSGN1A6NI15 193 aa12.88□□□□□ -0.35
CHRNA3-201ENST00000326828 ICOSLGO75144 302 aa12.88□□□□□ -0.35
CHRNA3-201ENST00000326828 ACAA1P09110 424 aaPredicted RBP12.88□□□□□ -0.35
CHRNA3-201ENST00000326828 DAOP14920 347 aa12.88□□□□□ -0.35
CHRNA3-201ENST00000326828 CD96P40200 585 aa12.88□□□□□ -0.35
CHRNA3-201ENST00000326828 S100A10P60903 97 aa12.88□□□□□ -0.35
CHRNA3-201ENST00000326828 FAM122BQ7Z309 247 aa12.88□□□□□ -0.35
CHRNA3-201ENST00000326828 MARCH1Q8TCQ1 289 aa12.88□□□□□ -0.35
CHRNA3-201ENST00000326828 ISOC2Q96AB3 205 aa12.88□□□□□ -0.35
CHRNA3-201ENST00000326828 RSRP1Q9BUV0 290 aa12.88□□□□□ -0.35
CHRNA3-201ENST00000326828 CENPMQ9NSP4 180 aa12.88□□□□□ -0.35
CHRNA3-201ENST00000326828 ZFP57Q9NU63 452 aa12.88□□□□□ -0.35
CHRNA3-201ENST00000326828 HRASLS2Q9NWW9 162 aa12.88□□□□□ -0.35
CHRNA3-201ENST00000326828 MAFFQ9ULX9 164 aa12.88□□□□□ -0.35
CHRNA3-201ENST00000326828 EMC9Q9Y3B6 208 aa12.88□□□□□ -0.35
CHRNA3-201ENST00000326828 KLF2Q9Y5W3 355 aaPredicted RBP12.88□□□□□ -0.35
CHRNA3-201ENST00000326828 MED12Q93074 2177 aa12.88□□□□□ -0.35
CHRNA3-201ENST00000326828 A0A087WV62 115 aa12.87□□□□□ -0.35
CHRNA3-201ENST00000326828 TRBV5-7A0A0A0MS05 114 aa12.87□□□□□ -0.35
CHRNA3-201ENST00000326828 AK1P00568 194 aa12.87□□□□□ -0.35
CHRNA3-201ENST00000326828 GNB3P16520 340 aa12.87□□□□□ -0.35
CHRNA3-201ENST00000326828 SMCO1Q147U7 214 aa12.87□□□□□ -0.35
CHRNA3-201ENST00000326828 PEA15Q15121 130 aa12.87□□□□□ -0.35
CHRNA3-201ENST00000326828 ZNF74Q16587 644 aa12.87□□□□□ -0.35
CHRNA3-201ENST00000326828 GAB4Q2WGN9 574 aa12.87□□□□□ -0.35
CHRNA3-201ENST00000326828 GALNTL5Q7Z4T8 443 aa12.87□□□□□ -0.35
CHRNA3-201ENST00000326828 LINC00346Q8IVM7 164 aa12.87□□□□□ -0.35
CHRNA3-201ENST00000326828 CA13Q8N1Q1 262 aa12.87□□□□□ -0.35
CHRNA3-201ENST00000326828 OR13C3Q8NGS6 347 aa12.87□□□□□ -0.35
CHRNA3-201ENST00000326828 RRNAD1Q96FB5 475 aaKnown RBP12.87□□□□□ -0.35
CHRNA3-201ENST00000326828 CREBZFQ9NS37 354 aa12.87□□□□□ -0.35
CHRNA3-201ENST00000326828 UQCC1Q9NVA1 299 aa12.87□□□□□ -0.35
CHRNA3-201ENST00000326828 EPHA6Q9UF33 1036 aa12.87□□□□□ -0.35
CHRNA3-201ENST00000326828 C9orf170A2RU37 121 aa12.87□□□□□ -0.35
CHRNA3-201ENST00000326828 SNAPINO95295 136 aa12.87□□□□□ -0.35
CHRNA3-201ENST00000326828 CD1AP06126 327 aa12.87□□□□□ -0.35
CHRNA3-201ENST00000326828 S100A9P06702 114 aaKnown RBP12.87□□□□□ -0.35
CHRNA3-201ENST00000326828 CD2P06729 351 aa12.87□□□□□ -0.35
CHRNA3-201ENST00000326828 CD80P33681 288 aa12.87□□□□□ -0.35
CHRNA3-201ENST00000326828 ZNF595Q8IYB9 648 aa12.87□□□□□ -0.35
CHRNA3-201ENST00000326828 MCHR2Q969V1 340 aa12.87□□□□□ -0.35
CHRNA3-201ENST00000326828 WISP1O95388 367 aa12.86□□□□□ -0.35
CHRNA3-201ENST00000326828 FABP1P07148 127 aa12.86□□□□□ -0.35
CHRNA3-201ENST00000326828 TPT1P13693 172 aaKnown RBP12.86□□□□□ -0.35
CHRNA3-201ENST00000326828 NPY4RP50391 375 aa12.86□□□□□ -0.35
CHRNA3-201ENST00000326828 RASGEF1BQ0VAM2 473 aa12.86□□□□□ -0.35
CHRNA3-201ENST00000326828 KRBOX4Q5JUW0 171 aa12.86□□□□□ -0.35
CHRNA3-201ENST00000326828 CHRDL2Q6WN34 429 aa12.86□□□□□ -0.35
CHRNA3-201ENST00000326828 LINC00114Q6XXX2 140 aa12.86□□□□□ -0.35
CHRNA3-201ENST00000326828 LYG2Q86SG7 212 aa12.86□□□□□ -0.35
CHRNA3-201ENST00000326828 BAP18Q8IXM2 172 aa12.86□□□□□ -0.35
CHRNA3-201ENST00000326828 BCORP1Q8N888 145 aa12.86□□□□□ -0.35
CHRNA3-201ENST00000326828 C16orf52Q8NHV5 167 aa12.86□□□□□ -0.35
CHRNA3-201ENST00000326828 METTL21AQ8WXB1 218 aa12.86□□□□□ -0.35
CHRNA3-201ENST00000326828 SMIM3Q9BZL3 60 aa12.86□□□□□ -0.35
CHRNA3-201ENST00000326828 NRSN2Q9GZP1 204 aa12.86□□□□□ -0.35
CHRNA3-201ENST00000326828 MRPS33Q9Y291 106 aaKnown RBP12.86□□□□□ -0.35
CHRNA3-201ENST00000326828 RPH3AQ9Y2J0 694 aaPredicted RBP12.86□□□□□ -0.35
CHRNA3-201ENST00000326828 LOC101059948A0A1B0GTJ6 334 aa12.86□□□□□ -0.35
CHRNA3-201ENST00000326828 TGFBR3LH3BV60 316 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms