RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 CCL11P51671 97 aa7.27□□□□□ -1.25
CIITA-201ENST00000324288 SNRPEP62304 92 aaKnown RBP7.27□□□□□ -1.25
CIITA-201ENST00000324288 DTD2Q96FN9 168 aa7.27□□□□□ -1.25
CIITA-201ENST00000324288 BARX1Q9HBU1 254 aaPredicted RBP7.27□□□□□ -1.25
CIITA-201ENST00000324288 PPP5D1E7EU14 171 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 CLEC14AQ86T13 490 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 SLC35G3Q8N808 338 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 UTP23Q9BRU9 249 aaKnown RBP7.26□□□□□ -1.25
CIITA-201ENST00000324288 CORINQ9Y5Q5 1042 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 MMP24Q9Y5R2 645 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 A3GALT2U3KPV4 340 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 FAM221AA4D161 298 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 CIDEAO60543 219 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 ABHD16AO95870 558 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 LGI1O95970 557 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 CT45A6P0DMU7 189 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 CT45A5P0DMU8 189 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 CT45A7P0DMV0 189 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 CT45A8P0DMV1 189 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 CT45A9P0DMV2 189 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 SRMP19623 302 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 LGALS4P56470 323 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 ZNF750Q32MQ0 723 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 PKDCCQ504Y2 493 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 CT45A2Q5DJT8 189 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 CT45A1Q5HYN5 189 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 GGNBP1Q5YKI7 109 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 MAML2Q8IZL2 1156 aaPredicted RBP7.26□□□□□ -1.25
CIITA-201ENST00000324288 CT45A3Q8NHU0 189 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 FAM3DQ96BQ1 224 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 SLC2A11Q9BYW1 496 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 CTDSP1Q9GZU7 261 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 hCG_1809904A0A1W2PP81 198 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 A0A1W2PR64 198 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 PTGESO14684 152 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 UBL3O95164 117 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 CD63P08962 238 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 LCTLQ6UWM7 567 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 ANKRD53Q8N9V6 530 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 GHRLQ9UBU3 117 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 SLC45A1Q9Y2W3 748 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 ANKRD36A6QL64 1941 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 IGHV3-20A0A0C4DH32 117 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 OR5H15A6NDH6 313 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 OR5H1A6NKK0 313 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 GPR85P60893 370 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 SPANXN5Q5MJ07 72 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 SLC38A5Q8WUX1 472 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 UTS2O95399 124 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 TRAPPC2P0DI81 140 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 TRAPPC2BP0DI82 140 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 CEBPEQ15744 281 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 FAM219BQ5XKK7 198 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 NRSN2Q9GZP1 204 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 PIGMQ9H3S5 423 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 CCL26Q9Y258 94 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 WDR81Q562E7 1941 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 A0A1W2PPQ1 181 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 J3QR89 54 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 ZFAND5O76080 213 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 TOX4O94842 621 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 ALKBH1Q13686 389 aaKnown RBP7.26□□□□□ -1.25
CIITA-201ENST00000324288 PPP1R3BQ86XI6 285 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 ZCCHC4Q9H5U6 513 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 SIRT3Q9NTG7 399 aaPredicted RBP7.26□□□□□ -1.25
CIITA-201ENST00000324288 ADAM29Q9UKF5 820 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 A0A1W2PPH5 198 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 GPR171O14626 319 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 SCRG1O75711 98 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 NID1P14543 1247 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 PTBP1P26599 531 aaKnown RBP eCLIP7.26□□□□□ -1.25
CIITA-201ENST00000324288 GNB2P62879 340 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 DMRTC1Q5HYR2 192 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 B3GNT9Q6UX72 402 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 CLRN3Q8NCR9 226 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 TMEM255BQ8WV15 326 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 DYRK2Q92630 601 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 EMG1Q92979 244 aaKnown RBP7.26□□□□□ -1.25
CIITA-201ENST00000324288 GAREM1Q9H706 876 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.26□□□□□ -1.25
CIITA-201ENST00000324288 NFAT5O94916 1531 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 FGF7P21781 194 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 TACR1P25103 407 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 FOXK2Q01167 660 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 CTBSQ01459 385 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 ZNF680Q8NEM1 530 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 TMEM37Q8WXS4 190 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 COL14A1Q05707 1796 aaKnown RBP7.26□□□□□ -1.25
CIITA-201ENST00000324288 ADAM23O75077 832 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 OR2J3O76001 311 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 OR2T7P0C7T2 308 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 SDHAP31040 664 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 BTG1P62324 171 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 CD300LGQ6UXG3 332 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 ZNF620Q6ZNG0 422 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 MBOAT2Q6ZWT7 520 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 ZNF629Q9UEG4 869 aaPredicted RBP7.26□□□□□ -1.25
CIITA-201ENST00000324288 CHST2Q9Y4C5 530 aa7.26□□□□□ -1.25
CIITA-201ENST00000324288 NKX6-3A6NJ46 265 aa7.25□□□□□ -1.25
CIITA-201ENST00000324288 XRCC2O43543 280 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms