RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 TBX5Q99593 518 aa11.91□□□□□ -0.5
PRPF18-201ENST00000320054 USB1Q9BQ65 265 aaKnown RBP11.91□□□□□ -0.5
PRPF18-201ENST00000320054 ABHD6Q9BV23 337 aa11.91□□□□□ -0.5
PRPF18-201ENST00000320054 CCDC90BQ9GZT6 254 aa11.91□□□□□ -0.5
PRPF18-201ENST00000320054 OR10A4Q9H209 315 aa11.91□□□□□ -0.5
PRPF18-201ENST00000320054 C1orf198Q9H425 327 aa11.91□□□□□ -0.5
PRPF18-201ENST00000320054 GALNT8Q9NY28 637 aa11.91□□□□□ -0.5
PRPF18-201ENST00000320054 ASH2LQ9UBL3 628 aa11.91□□□□□ -0.5
PRPF18-201ENST00000320054 GDF2Q9UK05 429 aaPredicted RBP11.91□□□□□ -0.5
PRPF18-201ENST00000320054 COPS3Q9UNS2 423 aa11.91□□□□□ -0.5
PRPF18-201ENST00000320054 SLC5A6Q9Y289 635 aa11.91□□□□□ -0.5
PRPF18-201ENST00000320054 KLHDC2Q9Y2U9 406 aa11.91□□□□□ -0.5
PRPF18-201ENST00000320054 MYO18BQ8IUG5 2567 aa11.9□□□□□ -0.5
PRPF18-201ENST00000320054 A0A096LPE4 126 aa11.9□□□□□ -0.5
PRPF18-201ENST00000320054 A0A1W2PPZ6 126 aa11.9□□□□□ -0.5
PRPF18-201ENST00000320054 RAD51DO75771 328 aa11.9□□□□□ -0.5
PRPF18-201ENST00000320054 UBR5O95071 2799 aaPredicted RBP11.9□□□□□ -0.5
PRPF18-201ENST00000320054 UBL3O95164 117 aa11.9□□□□□ -0.5
PRPF18-201ENST00000320054 MMP7P09237 267 aaPredicted RBP11.9□□□□□ -0.5
PRPF18-201ENST00000320054 SMIM18P0DKX4 95 aa11.9□□□□□ -0.5
PRPF18-201ENST00000320054 ARR3P36575 388 aa11.9□□□□□ -0.5
PRPF18-201ENST00000320054 RPS27P42677 84 aaKnown RBP11.9□□□□□ -0.5
PRPF18-201ENST00000320054 ACTA2P62736 377 aa11.9□□□□□ -0.5
PRPF18-201ENST00000320054 ACTG2P63267 376 aa11.9□□□□□ -0.5
PRPF18-201ENST00000320054 ROM1Q03395 351 aa11.9□□□□□ -0.5
PRPF18-201ENST00000320054 EGR3Q06889 387 aa11.9□□□□□ -0.5
PRPF18-201ENST00000320054 SCRN3Q0VDG4 424 aa11.9□□□□□ -0.5
PRPF18-201ENST00000320054 TBCEQ15813 527 aaPredicted RBP11.9□□□□□ -0.5
PRPF18-201ENST00000320054 SLC36A2Q495M3 483 aa11.9□□□□□ -0.5
PRPF18-201ENST00000320054 CDONQ4KMG0 1287 aa11.9□□□□□ -0.5
PRPF18-201ENST00000320054 ZNF684Q5T5D7 378 aa11.9□□□□□ -0.5
PRPF18-201ENST00000320054 KCTD18Q6PI47 426 aaPredicted RBP11.9□□□□□ -0.5
PRPF18-201ENST00000320054 CORO6Q6QEF8 472 aa11.9□□□□□ -0.5
PRPF18-201ENST00000320054 DEGS2Q6QHC5 323 aa11.9□□□□□ -0.5
PRPF18-201ENST00000320054 ZNF322Q6U7Q0 402 aaPredicted RBP11.9□□□□□ -0.5
PRPF18-201ENST00000320054 PLEKHG7Q6ZR37 379 aa11.9□□□□□ -0.5
PRPF18-201ENST00000320054 DCXRQ7Z4W1 244 aa11.9□□□□□ -0.5
PRPF18-201ENST00000320054 KCTD20Q7Z5Y7 419 aa11.9□□□□□ -0.5
PRPF18-201ENST00000320054 LHFPL3Q86UP9 236 aa11.9□□□□□ -0.5
PRPF18-201ENST00000320054 P2RY8Q86VZ1 359 aa11.9□□□□□ -0.5
PRPF18-201ENST00000320054 LINC00346Q8IVM7 164 aa11.9□□□□□ -0.5
PRPF18-201ENST00000320054 SYS1Q8N2H4 156 aa11.9□□□□□ -0.5
PRPF18-201ENST00000320054 RFLNBQ8N5W9 214 aa11.9□□□□□ -0.5
PRPF18-201ENST00000320054 NANOGP1Q8N7R0 232 aa11.9□□□□□ -0.5
PRPF18-201ENST00000320054 STEAP2Q8NFT2 490 aa11.9□□□□□ -0.5
PRPF18-201ENST00000320054 OR52N1Q8NH53 320 aa11.9□□□□□ -0.5
PRPF18-201ENST00000320054 OR52N5Q8NH56 324 aa11.9□□□□□ -0.5
PRPF18-201ENST00000320054 THEM6Q8WUY1 208 aa11.9□□□□□ -0.5
PRPF18-201ENST00000320054 MAP6Q96JE9 813 aa11.9□□□□□ -0.5
PRPF18-201ENST00000320054 ALG8Q9BVK2 526 aa11.9□□□□□ -0.5
PRPF18-201ENST00000320054 MND1Q9BWT6 205 aa11.9□□□□□ -0.5
PRPF18-201ENST00000320054 OBP2BQ9NPH6 170 aa11.9□□□□□ -0.5
PRPF18-201ENST00000320054 SLC17A5Q9NRA2 495 aa11.9□□□□□ -0.5
PRPF18-201ENST00000320054 ZNF224Q9NZL3 707 aa11.9□□□□□ -0.5
PRPF18-201ENST00000320054 ERGIC3Q9Y282 383 aa11.9□□□□□ -0.5
PRPF18-201ENST00000320054 CAB39Q9Y376 341 aaPredicted RBP11.9□□□□□ -0.5
PRPF18-201ENST00000320054 TIMM10BQ9Y5J6 103 aa11.9□□□□□ -0.5
PRPF18-201ENST00000320054 FLNCQ14315 2725 aa11.9□□□□□ -0.5
PRPF18-201ENST00000320054 OR5H1A6NKK0 313 aa11.89□□□□□ -0.51
PRPF18-201ENST00000320054 MYL12BO14950 172 aa11.89□□□□□ -0.51
PRPF18-201ENST00000320054 ZNF254O75437 659 aa11.89□□□□□ -0.51
PRPF18-201ENST00000320054 SULT1C4O75897 302 aa11.89□□□□□ -0.51
PRPF18-201ENST00000320054 ZNF32P17041 273 aa11.89□□□□□ -0.51
PRPF18-201ENST00000320054 PAX7P23759 505 aa11.89□□□□□ -0.51
PRPF18-201ENST00000320054 IL32P24001 234 aa11.89□□□□□ -0.51
PRPF18-201ENST00000320054 CAPZA2P47755 286 aa11.89□□□□□ -0.51
PRPF18-201ENST00000320054 UBE2NP61088 152 aaKnown RBP11.89□□□□□ -0.51
PRPF18-201ENST00000320054 EMX1Q04741 257 aaPredicted RBP11.89□□□□□ -0.51
PRPF18-201ENST00000320054 HIKESHIQ53FT3 197 aa11.89□□□□□ -0.51
PRPF18-201ENST00000320054 TMEM53Q6P2H8 277 aa11.89□□□□□ -0.51
PRPF18-201ENST00000320054 XKRXQ6PP77 449 aa11.89□□□□□ -0.51
PRPF18-201ENST00000320054 TMPRSS11AQ6ZMR5 421 aa11.89□□□□□ -0.51
PRPF18-201ENST00000320054 CFAP77Q6ZQR2 320 aa11.89□□□□□ -0.51
PRPF18-201ENST00000320054 SSX6Q7RTT6 188 aa11.89□□□□□ -0.51
PRPF18-201ENST00000320054 KLHL36Q8N4N3 616 aa11.89□□□□□ -0.51
PRPF18-201ENST00000320054 RNF133Q8WVZ7 376 aa11.89□□□□□ -0.51
PRPF18-201ENST00000320054 SLAMF6Q96DU3 332 aa11.89□□□□□ -0.51
PRPF18-201ENST00000320054 OR8B4Q96RC9 309 aa11.89□□□□□ -0.51
PRPF18-201ENST00000320054 AMELYQ99218 206 aa11.89□□□□□ -0.51
PRPF18-201ENST00000320054 MRPS26Q9BYN8 205 aaKnown RBP11.89□□□□□ -0.51
PRPF18-201ENST00000320054 ACOT13Q9NPJ3 140 aa11.89□□□□□ -0.51
PRPF18-201ENST00000320054 B3GNT2Q9NY97 397 aa11.89□□□□□ -0.51
PRPF18-201ENST00000320054 CLEC2DQ9UHP7 191 aa11.89□□□□□ -0.51
PRPF18-201ENST00000320054 ATPIF1Q9UII2 106 aa11.89□□□□□ -0.51
PRPF18-201ENST00000320054 SMG1Q96Q15 3661 aaKnown RBP11.88□□□□□ -0.51
PRPF18-201ENST00000320054 METTL15A6NJ78 407 aa11.88□□□□□ -0.51
PRPF18-201ENST00000320054 PRR32B1ATL7 298 aa11.88□□□□□ -0.51
PRPF18-201ENST00000320054 ZNF878C9JN71 531 aa11.88□□□□□ -0.51
PRPF18-201ENST00000320054 RER1O15258 196 aa11.88□□□□□ -0.51
PRPF18-201ENST00000320054 SGCEO43556 437 aa11.88□□□□□ -0.51
PRPF18-201ENST00000320054 HLA-HP01893 362 aa11.88□□□□□ -0.51
PRPF18-201ENST00000320054 TACSTD2P09758 323 aa11.88□□□□□ -0.51
PRPF18-201ENST00000320054 PCMT1P22061 227 aa11.88□□□□□ -0.51
PRPF18-201ENST00000320054 OPRL1P41146 370 aa11.88□□□□□ -0.51
PRPF18-201ENST00000320054 WNT4P56705 351 aa11.88□□□□□ -0.51
PRPF18-201ENST00000320054 PSG4Q00888 419 aa11.88□□□□□ -0.51
PRPF18-201ENST00000320054 RAB35Q15286 201 aa11.88□□□□□ -0.51
PRPF18-201ENST00000320054 TSC22D1Q15714 1073 aa11.88□□□□□ -0.51
PRPF18-201ENST00000320054 CCDC92Q53HC0 331 aaPredicted RBP11.88□□□□□ -0.51
PRPF18-201ENST00000320054 TIMM23BQ5SRD1 257 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms