RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 SAMD4AQ9UPU9 718 aaKnown RBP12.05□□□□□ -0.48
RPP40-201ENST00000319533 MCIDASD6RGH6 385 aa12.04□□□□□ -0.48
RPP40-201ENST00000319533 PRSS23O95084 383 aa12.04□□□□□ -0.48
RPP40-201ENST00000319533 ZNF32P17041 273 aa12.04□□□□□ -0.48
RPP40-201ENST00000319533 FPR2P25090 351 aa12.04□□□□□ -0.48
RPP40-201ENST00000319533 PSG4Q00888 419 aa12.04□□□□□ -0.48
RPP40-201ENST00000319533 GLO1Q04760 184 aa12.04□□□□□ -0.48
RPP40-201ENST00000319533 SLC3A1Q07837 685 aa12.04□□□□□ -0.48
RPP40-201ENST00000319533 TRAM2Q15035 370 aa12.04□□□□□ -0.48
RPP40-201ENST00000319533 SAMD4BQ5PRF9 694 aaKnown RBP12.04□□□□□ -0.48
RPP40-201ENST00000319533 PRR31Q5SQ13 230 aa12.04□□□□□ -0.48
RPP40-201ENST00000319533 THEM4Q5T1C6 240 aa12.04□□□□□ -0.48
RPP40-201ENST00000319533 FAM27BQ5VT28 67 aa12.04□□□□□ -0.48
RPP40-201ENST00000319533 UNQ6126/PRO20091Q6UXV3 157 aa12.04□□□□□ -0.48
RPP40-201ENST00000319533 BPIFB2Q8N4F0 458 aa12.04□□□□□ -0.48
RPP40-201ENST00000319533 RNF148Q8N7C7 305 aa12.04□□□□□ -0.48
RPP40-201ENST00000319533 ICA1LQ8NDH6 482 aa12.04□□□□□ -0.48
RPP40-201ENST00000319533 KLF14Q8TD94 323 aaPredicted RBP12.04□□□□□ -0.48
RPP40-201ENST00000319533 IPCEF1Q8WWN9 437 aaPredicted RBP12.04□□□□□ -0.48
RPP40-201ENST00000319533 UTP4Q969X6 686 aaKnown RBP12.04□□□□□ -0.48
RPP40-201ENST00000319533 KCNN2Q9H2S1 579 aa12.04□□□□□ -0.48
RPP40-201ENST00000319533 CCNB1IP1Q9NPC3 277 aa12.04□□□□□ -0.48
RPP40-201ENST00000319533 C20orf141Q9NUB4 165 aa12.04□□□□□ -0.48
RPP40-201ENST00000319533 EIF3KQ9UBQ5 218 aaKnown RBP12.04□□□□□ -0.48
RPP40-201ENST00000319533 CGGBP1Q9UFW8 167 aaPredicted RBP12.04□□□□□ -0.48
RPP40-201ENST00000319533 POLR3KQ9Y2Y1 108 aaPredicted RBP12.04□□□□□ -0.48
RPP40-201ENST00000319533 FAM32AQ9Y421 112 aaKnown RBP12.04□□□□□ -0.48
RPP40-201ENST00000319533 ARHGAP32A7KAX9 2087 aa12.04□□□□□ -0.48
RPP40-201ENST00000319533 TANC2Q9HCD6 1990 aa12.03□□□□□ -0.48
RPP40-201ENST00000319533 IGKV1D-43A0A0B4J1Z2 117 aa12.03□□□□□ -0.48
RPP40-201ENST00000319533 ZSCAN5BA6NJL1 495 aa12.03□□□□□ -0.48
RPP40-201ENST00000319533 J3KTA2 159 aa12.03□□□□□ -0.48
RPP40-201ENST00000319533 SPRY3O43610 288 aa12.03□□□□□ -0.48
RPP40-201ENST00000319533 ATP5HO75947 161 aa12.03□□□□□ -0.48
RPP40-201ENST00000319533 SLC2A10O95528 541 aa12.03□□□□□ -0.48
RPP40-201ENST00000319533 HKR1P10072 659 aa12.03□□□□□ -0.48
RPP40-201ENST00000319533 IFI30P13284 250 aa12.03□□□□□ -0.48
RPP40-201ENST00000319533 HSD17B1P14061 328 aa12.03□□□□□ -0.48
RPP40-201ENST00000319533 CCNOP22674 350 aa12.03□□□□□ -0.48
RPP40-201ENST00000319533 GCH1P30793 250 aa12.03□□□□□ -0.48
RPP40-201ENST00000319533 CDAP32320 146 aa12.03□□□□□ -0.48
RPP40-201ENST00000319533 AQP2P41181 271 aa12.03□□□□□ -0.48
RPP40-201ENST00000319533 SLC25A47Q6Q0C1 308 aa12.03□□□□□ -0.48
RPP40-201ENST00000319533 FOXL2NBQ6ZUU3 175 aa12.03□□□□□ -0.48
RPP40-201ENST00000319533 MOSPD2Q8NHP6 518 aa12.03□□□□□ -0.48
RPP40-201ENST00000319533 SLC25A40Q8TBP6 338 aa12.03□□□□□ -0.48
RPP40-201ENST00000319533 CCL17Q92583 94 aa12.03□□□□□ -0.48
RPP40-201ENST00000319533 HDAC2Q92769 488 aaKnown RBP12.03□□□□□ -0.48
RPP40-201ENST00000319533 BPIFA2Q96DR5 249 aa12.03□□□□□ -0.48
RPP40-201ENST00000319533 DIRC2Q96SL1 478 aa12.03□□□□□ -0.48
RPP40-201ENST00000319533 GAL3ST1Q99999 423 aa12.03□□□□□ -0.48
RPP40-201ENST00000319533 CADM1Q9BY67 442 aaKnown RBP12.03□□□□□ -0.48
RPP40-201ENST00000319533 OR2J1Q9GZK6 312 aa12.03□□□□□ -0.48
RPP40-201ENST00000319533 EGLN1Q9GZT9 426 aa12.03□□□□□ -0.48
RPP40-201ENST00000319533 ZNF696Q9H7X3 374 aa12.03□□□□□ -0.48
RPP40-201ENST00000319533 RHCGQ9UBD6 479 aa12.03□□□□□ -0.48
RPP40-201ENST00000319533 MAGEL2Q9UJ55 1249 aa12.03□□□□□ -0.48
RPP40-201ENST00000319533 ZDHHC8Q9ULC8 765 aa12.03□□□□□ -0.48
RPP40-201ENST00000319533 SNX13Q9Y5W8 968 aa12.03□□□□□ -0.48
RPP40-201ENST00000319533 PLSCR5A0PG75 271 aa12.02□□□□□ -0.49
RPP40-201ENST00000319533 C5orf49A4QMS7 147 aa12.02□□□□□ -0.49
RPP40-201ENST00000319533 PIP5K1CO60331 668 aa12.02□□□□□ -0.49
RPP40-201ENST00000319533 FOXH1O75593 365 aa12.02□□□□□ -0.49
RPP40-201ENST00000319533 DNAJC8O75937 253 aaPredicted RBP12.02□□□□□ -0.49
RPP40-201ENST00000319533 IGHV2-70P01814 119 aa12.02□□□□□ -0.49
RPP40-201ENST00000319533 ZFP36P26651 326 aaKnown RBP12.02□□□□□ -0.49
RPP40-201ENST00000319533 GDI2P50395 445 aaKnown RBP12.02□□□□□ -0.49
RPP40-201ENST00000319533 FOXL1Q12952 345 aa12.02□□□□□ -0.49
RPP40-201ENST00000319533 TAF11Q15544 211 aa12.02□□□□□ -0.49
RPP40-201ENST00000319533 SPATS1Q496A3 300 aa12.02□□□□□ -0.49
RPP40-201ENST00000319533 SPRNQ5BIV9 151 aa12.02□□□□□ -0.49
RPP40-201ENST00000319533 SPATA46Q5T0L3 261 aa12.02□□□□□ -0.49
RPP40-201ENST00000319533 ZNF730Q6ZMV8 503 aa12.02□□□□□ -0.49
RPP40-201ENST00000319533 RFPL4BQ6ZWI9 263 aa12.02□□□□□ -0.49
RPP40-201ENST00000319533 DOK3Q7L591 496 aa12.02□□□□□ -0.49
RPP40-201ENST00000319533 RRM2BQ7LG56 351 aa12.02□□□□□ -0.49
RPP40-201ENST00000319533 NRMQ8IXM6 262 aa12.02□□□□□ -0.49
RPP40-201ENST00000319533 DEFB107AQ8IZN7 70 aa12.02□□□□□ -0.49
RPP40-201ENST00000319533 RNF113BQ8IZP6 322 aaKnown RBP12.02□□□□□ -0.49
RPP40-201ENST00000319533 FAM156AQ8NDB6 213 aa12.02□□□□□ -0.49
RPP40-201ENST00000319533 DEFB108BQ8NET1 73 aa12.02□□□□□ -0.49
RPP40-201ENST00000319533 AKR7LQ8NHP1 331 aa12.02□□□□□ -0.49
RPP40-201ENST00000319533 ACOT11Q8WXI4 607 aaPredicted RBP12.02□□□□□ -0.49
RPP40-201ENST00000319533 POP5Q969H6 163 aaKnown RBP12.02□□□□□ -0.49
RPP40-201ENST00000319533 CDRT15Q96T59 188 aa12.02□□□□□ -0.49
RPP40-201ENST00000319533 BTBD10Q9BSF8 475 aa12.02□□□□□ -0.49
RPP40-201ENST00000319533 ALG12Q9BV10 488 aa12.02□□□□□ -0.49
RPP40-201ENST00000319533 OR2H1Q9GZK4 316 aa12.02□□□□□ -0.49
RPP40-201ENST00000319533 WNT5BQ9H1J7 359 aa12.02□□□□□ -0.49
RPP40-201ENST00000319533 TXNIPQ9H3M7 391 aa12.02□□□□□ -0.49
RPP40-201ENST00000319533 ANKRD19PQ9H560 264 aa12.02□□□□□ -0.49
RPP40-201ENST00000319533 GORASP2Q9H8Y8 452 aa12.02□□□□□ -0.49
RPP40-201ENST00000319533 DDX28Q9NUL7 540 aaKnown RBP12.02□□□□□ -0.49
RPP40-201ENST00000319533 DCAF13Q9NV06 445 aaKnown RBP12.02□□□□□ -0.49
RPP40-201ENST00000319533 ENPP4Q9Y6X5 453 aa12.02□□□□□ -0.49
RPP40-201ENST00000319533 FFAR1O14842 300 aa12.01□□□□□ -0.49
RPP40-201ENST00000319533 TMPRSS2O15393 492 aa12.01□□□□□ -0.49
RPP40-201ENST00000319533 KCNAB3O43448 404 aa12.01□□□□□ -0.49
RPP40-201ENST00000319533 CST2P09228 141 aa12.01□□□□□ -0.49
RPP40-201ENST00000319533 NR2C1P13056 603 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms