RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 FAM157BP0CG42 384 aa16.31■□□□□ 0.2
CCDC43-201ENST00000315286 NR4A2P43354 598 aa16.31■□□□□ 0.2
CCDC43-201ENST00000315286 OR10S1Q8NGN2 331 aa16.31■□□□□ 0.2
CCDC43-201ENST00000315286 THRSPQ92748 146 aa16.31■□□□□ 0.2
CCDC43-201ENST00000315286 ZC3HAV1LQ96H79 300 aaKnown RBP16.31■□□□□ 0.2
CCDC43-201ENST00000315286 DHDHQ9UQ10 334 aa16.31■□□□□ 0.2
CCDC43-201ENST00000315286 LHFPL6Q9Y693 200 aa16.31■□□□□ 0.2
CCDC43-201ENST00000315286 OTOGLQ3ZCN5 2332 aa16.31■□□□□ 0.2
CCDC43-201ENST00000315286 MEIOCA2RUB1 952 aa16.31■□□□□ 0.2
CCDC43-201ENST00000315286 CALCBP10092 127 aa16.31■□□□□ 0.2
CCDC43-201ENST00000315286 EIF2B2P49770 351 aaKnown RBP16.31■□□□□ 0.2
CCDC43-201ENST00000315286 MMP15P51511 669 aa16.31■□□□□ 0.2
CCDC43-201ENST00000315286 PITPNAQ00169 270 aa16.31■□□□□ 0.2
CCDC43-201ENST00000315286 TRIP6Q15654 476 aaKnown RBP16.31■□□□□ 0.2
CCDC43-201ENST00000315286 CREB3L2Q70SY1 520 aa16.31■□□□□ 0.2
CCDC43-201ENST00000315286 DUSP18Q8NEJ0 188 aa16.31■□□□□ 0.2
CCDC43-201ENST00000315286 OR14L1PQ8NHC6 308 aa16.31■□□□□ 0.2
CCDC43-201ENST00000315286 C1orf198Q9H425 327 aa16.31■□□□□ 0.2
CCDC43-201ENST00000315286 ZNF318Q5VUA4 2279 aa16.31■□□□□ 0.2
CCDC43-201ENST00000315286 FAM240BA0A1B0GVZ2 78 aa16.3■□□□□ 0.2
CCDC43-201ENST00000315286 CLDN20P56880 219 aa16.3■□□□□ 0.2
CCDC43-201ENST00000315286 CSNK2A1P68400 391 aaPredicted RBP16.3■□□□□ 0.2
CCDC43-201ENST00000315286 DGCR2P98153 550 aa16.3■□□□□ 0.2
CCDC43-201ENST00000315286 RNASE12Q5GAN4 147 aaKnown RBP16.3■□□□□ 0.2
CCDC43-201ENST00000315286 SPINK14Q6IE38 97 aa16.3■□□□□ 0.2
CCDC43-201ENST00000315286 CFAP77Q6ZQR2 320 aa16.3■□□□□ 0.2
CCDC43-201ENST00000315286 PRSS45Q7RTY3 260 aa16.3■□□□□ 0.2
CCDC43-201ENST00000315286 SERPINA12Q8IW75 414 aa16.3■□□□□ 0.2
CCDC43-201ENST00000315286 ZNF385AQ96PM9 386 aaKnown RBP16.3■□□□□ 0.2
CCDC43-201ENST00000315286 NAA11Q9BSU3 229 aaPredicted RBP16.3■□□□□ 0.2
CCDC43-201ENST00000315286 MRI1Q9BV20 369 aa16.3■□□□□ 0.2
CCDC43-201ENST00000315286 RNF121Q9H920 327 aa16.3■□□□□ 0.2
CCDC43-201ENST00000315286 NLKQ9UBE8 527 aa16.3■□□□□ 0.2
CCDC43-201ENST00000315286 MED13Q9UHV7 2174 aa16.3■□□□□ 0.2
CCDC43-201ENST00000315286 EP300Q09472 2414 aaPredicted RBP16.3■□□□□ 0.2
CCDC43-201ENST00000315286 PINLYPA6NC86 204 aa16.3■□□□□ 0.2
CCDC43-201ENST00000315286 TLX3O43711 291 aaPredicted RBP16.3■□□□□ 0.2
CCDC43-201ENST00000315286 CD3GP09693 182 aa16.3■□□□□ 0.2
CCDC43-201ENST00000315286 ENPP1P22413 925 aa16.3■□□□□ 0.2
CCDC43-201ENST00000315286 SRP9P49458 86 aaKnown RBP16.3■□□□□ 0.2
CCDC43-201ENST00000315286 GPR176Q14439 515 aa16.3■□□□□ 0.2
CCDC43-201ENST00000315286 SLC36A2Q495M3 483 aa16.3■□□□□ 0.2
CCDC43-201ENST00000315286 PLET1Q6UQ28 207 aa16.3■□□□□ 0.2
CCDC43-201ENST00000315286 ADAMTS17Q8TE56 1095 aa16.3■□□□□ 0.2
CCDC43-201ENST00000315286 YIPF5Q969M3 257 aa16.3■□□□□ 0.2
CCDC43-201ENST00000315286 SRXN1Q9BYN0 137 aa16.3■□□□□ 0.2
CCDC43-201ENST00000315286 LRFN1Q9P244 771 aa16.3■□□□□ 0.2
CCDC43-201ENST00000315286 IL17BQ9UHF5 180 aa16.3■□□□□ 0.2
CCDC43-201ENST00000315286 GDF2Q9UK05 429 aaPredicted RBP16.3■□□□□ 0.2
CCDC43-201ENST00000315286 NCOA6Q14686 2063 aaPredicted RBP16.29■□□□□ 0.2
CCDC43-201ENST00000315286 ARPC4-TTLL3A0A0A6YYG9 625 aa16.29■□□□□ 0.2
CCDC43-201ENST00000315286 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.29■□□□□ 0.2
CCDC43-201ENST00000315286 VAMP5O95183 116 aa16.29■□□□□ 0.2
CCDC43-201ENST00000315286 ISG15P05161 165 aa16.29■□□□□ 0.2
CCDC43-201ENST00000315286 CD96P40200 585 aa16.29■□□□□ 0.2
CCDC43-201ENST00000315286 MMP16P51512 607 aa16.29■□□□□ 0.2
CCDC43-201ENST00000315286 BAIAP2L2Q6UXY1 529 aa16.29■□□□□ 0.2
CCDC43-201ENST00000315286 SYNPRQ8TBG9 265 aa16.29■□□□□ 0.2
CCDC43-201ENST00000315286 GLTPQ9NZD2 209 aa16.29■□□□□ 0.2
CCDC43-201ENST00000315286 NPAP1Q9NZP6 1156 aa16.29■□□□□ 0.2
CCDC43-201ENST00000315286 HHLA2Q9UM44 414 aa16.29■□□□□ 0.2
CCDC43-201ENST00000315286 POLR1DQ9Y2S0 133 aa16.29■□□□□ 0.2
CCDC43-201ENST00000315286 GJE1A6NN92 205 aa16.28■□□□□ 0.2
CCDC43-201ENST00000315286 TRAPPC6AO75865 159 aa16.28■□□□□ 0.2
CCDC43-201ENST00000315286 CSRP1P21291 193 aaKnown RBP16.28■□□□□ 0.2
CCDC43-201ENST00000315286 AGFG1P52594 562 aaKnown RBP16.28■□□□□ 0.2
CCDC43-201ENST00000315286 POU4F3Q15319 338 aa16.28■□□□□ 0.2
CCDC43-201ENST00000315286 PHYHD1Q5SRE7 291 aa16.28■□□□□ 0.2
CCDC43-201ENST00000315286 JMJD6Q6NYC1 403 aaPredicted RBP16.28■□□□□ 0.2
CCDC43-201ENST00000315286 MTFR2Q6P444 385 aa16.28■□□□□ 0.2
CCDC43-201ENST00000315286 KRT74Q7RTS7 529 aa16.28■□□□□ 0.2
CCDC43-201ENST00000315286 OR9K2Q8NGE7 335 aa16.28■□□□□ 0.2
CCDC43-201ENST00000315286 ABCG5Q9H222 651 aa16.28■□□□□ 0.2
CCDC43-201ENST00000315286 PARD6AQ9NPB6 346 aa16.28■□□□□ 0.2
CCDC43-201ENST00000315286 FAM206AQ9NX38 181 aa16.28■□□□□ 0.2
CCDC43-201ENST00000315286 A0A0B4J293 547 aa16.28■□□□□ 0.2
CCDC43-201ENST00000315286 LOC107986453A0A1B0GWG9 222 aa16.28■□□□□ 0.2
CCDC43-201ENST00000315286 NPIPA2E9PIF3 369 aa16.28■□□□□ 0.2
CCDC43-201ENST00000315286 NPIPA3F8WFD2 350 aa16.28■□□□□ 0.2
CCDC43-201ENST00000315286 CD2P06729 351 aa16.28■□□□□ 0.2
CCDC43-201ENST00000315286 CNR1P21554 472 aa16.28■□□□□ 0.2
CCDC43-201ENST00000315286 ACHEP22303 614 aa16.28■□□□□ 0.2
CCDC43-201ENST00000315286 WIPI1Q5MNZ9 446 aaPredicted RBP16.28■□□□□ 0.2
CCDC43-201ENST00000315286 DCAF10Q5QP82 559 aa16.28■□□□□ 0.2
CCDC43-201ENST00000315286 BCL2L15Q5TBC7 163 aa16.28■□□□□ 0.2
CCDC43-201ENST00000315286 ZNF704Q6ZNC4 412 aaPredicted RBP16.28■□□□□ 0.2
CCDC43-201ENST00000315286 OR2AJ1Q8NGZ0 328 aa16.28■□□□□ 0.2
CCDC43-201ENST00000315286 OR2M2Q96R28 347 aa16.28■□□□□ 0.2
CCDC43-201ENST00000315286 ASH2LQ9UBL3 628 aa16.28■□□□□ 0.2
CCDC43-201ENST00000315286 STEAP1Q9UHE8 339 aa16.28■□□□□ 0.2
CCDC43-201ENST00000315286 STMND1H3BQB6 276 aa16.27■□□□□ 0.2
CCDC43-201ENST00000315286 P2RY10O00398 339 aa16.27■□□□□ 0.2
CCDC43-201ENST00000315286 CTDSPLO15194 276 aa16.27■□□□□ 0.2
CCDC43-201ENST00000315286 DDOSTP39656 456 aa16.27■□□□□ 0.2
CCDC43-201ENST00000315286 CSNK1A1P48729 337 aa16.27■□□□□ 0.2
CCDC43-201ENST00000315286 ART1P52961 327 aa16.27■□□□□ 0.2
CCDC43-201ENST00000315286 FOXO1Q12778 655 aa16.27■□□□□ 0.2
CCDC43-201ENST00000315286 PLA2G7Q13093 441 aa16.27■□□□□ 0.2
CCDC43-201ENST00000315286 KCNMB1Q16558 191 aa16.27■□□□□ 0.2
CCDC43-201ENST00000315286 HACD4Q5VWC8 232 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms