RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 PLSCR3Q9NRY6 295 aa12.53□□□□□ -0.4
CLCN6-201ENST00000312413 G3V3Q6 166 aa12.53□□□□□ -0.4
CLCN6-201ENST00000312413 SCRG1O75711 98 aa12.53□□□□□ -0.4
CLCN6-201ENST00000312413 EDDM3BP56851 147 aa12.53□□□□□ -0.4
CLCN6-201ENST00000312413 THNSL2Q86YJ6 484 aa12.53□□□□□ -0.4
CLCN6-201ENST00000312413 OR2AE1Q8NHA4 323 aa12.53□□□□□ -0.4
CLCN6-201ENST00000312413 NUDT8Q8WV74 236 aa12.53□□□□□ -0.4
CLCN6-201ENST00000312413 FGF13Q92913 245 aa12.53□□□□□ -0.4
CLCN6-201ENST00000312413 DLG5Q8TDM6 1919 aa12.53□□□□□ -0.4
CLCN6-201ENST00000312413 IFITM5A6NNB3 132 aa12.52□□□□□ -0.4
CLCN6-201ENST00000312413 ABOP16442 354 aa12.52□□□□□ -0.4
CLCN6-201ENST00000312413 CARD18P57730 90 aa12.52□□□□□ -0.4
CLCN6-201ENST00000312413 DUSP5Q16690 384 aa12.52□□□□□ -0.4
CLCN6-201ENST00000312413 CCSMST1Q4G0I0 132 aa12.52□□□□□ -0.4
CLCN6-201ENST00000312413 C4orf17Q53FE4 359 aa12.52□□□□□ -0.4
CLCN6-201ENST00000312413 ZBTB37Q5TC79 503 aa12.52□□□□□ -0.4
CLCN6-201ENST00000312413 GRINAQ7Z429 371 aa12.52□□□□□ -0.4
CLCN6-201ENST00000312413 PIGQQ9BRB3 760 aa12.52□□□□□ -0.4
CLCN6-201ENST00000312413 GINS3Q9BRX5 216 aa12.52□□□□□ -0.4
CLCN6-201ENST00000312413 CHD2O14647 1828 aaKnown RBP12.52□□□□□ -0.4
CLCN6-201ENST00000312413 NALCNQ8IZF0 1738 aa12.52□□□□□ -0.4
CLCN6-201ENST00000312413 GPR171O14626 319 aa12.52□□□□□ -0.41
CLCN6-201ENST00000312413 PNPP00491 289 aa12.52□□□□□ -0.41
CLCN6-201ENST00000312413 FCER1GP30273 86 aa12.52□□□□□ -0.41
CLCN6-201ENST00000312413 SUMO1P63165 101 aaKnown RBP12.52□□□□□ -0.41
CLCN6-201ENST00000312413 TIGITQ495A1 244 aa12.52□□□□□ -0.41
CLCN6-201ENST00000312413 FAAP20Q6NZ36 180 aa12.52□□□□□ -0.41
CLCN6-201ENST00000312413 VHLLQ6RSH7 139 aa12.52□□□□□ -0.41
CLCN6-201ENST00000312413 EMG1Q92979 244 aaKnown RBP12.52□□□□□ -0.41
CLCN6-201ENST00000312413 FAM103A1Q9BTL3 118 aaKnown RBP12.52□□□□□ -0.41
CLCN6-201ENST00000312413 SRRQ9GZT4 340 aa12.52□□□□□ -0.41
CLCN6-201ENST00000312413 IFT22Q9H7X7 185 aa12.52□□□□□ -0.41
CLCN6-201ENST00000312413 TCRBV5S2A0A599 114 aa12.52□□□□□ -0.41
CLCN6-201ENST00000312413 DEGS1O15121 323 aa12.52□□□□□ -0.41
CLCN6-201ENST00000312413 GLI4P10075 376 aa12.52□□□□□ -0.41
CLCN6-201ENST00000312413 CDKN3Q16667 212 aa12.52□□□□□ -0.41
CLCN6-201ENST00000312413 MARCH3Q86UD3 253 aa12.52□□□□□ -0.41
CLCN6-201ENST00000312413 ZFP62Q8NB50 900 aaPredicted RBP12.52□□□□□ -0.41
CLCN6-201ENST00000312413 SLC38A9Q8NBW4 561 aa12.52□□□□□ -0.41
CLCN6-201ENST00000312413 ARRDC3Q96B67 414 aa12.52□□□□□ -0.41
CLCN6-201ENST00000312413 RPUSD4Q96CM3 377 aaKnown RBP12.52□□□□□ -0.41
CLCN6-201ENST00000312413 ZNF355PQ9NSJ1 428 aa12.52□□□□□ -0.41
CLCN6-201ENST00000312413 OR5K3A6NET4 321 aa12.52□□□□□ -0.41
CLCN6-201ENST00000312413 HMGN4O00479 90 aa12.52□□□□□ -0.41
CLCN6-201ENST00000312413 CNMDO75829 334 aa12.52□□□□□ -0.41
CLCN6-201ENST00000312413 TBPP20226 339 aa12.52□□□□□ -0.41
CLCN6-201ENST00000312413 DIO1P49895 249 aa12.52□□□□□ -0.41
CLCN6-201ENST00000312413 AQP6Q13520 282 aa12.52□□□□□ -0.41
CLCN6-201ENST00000312413 UCN3Q969E3 161 aa12.52□□□□□ -0.41
CLCN6-201ENST00000312413 CSF3RQ99062 836 aa12.52□□□□□ -0.41
CLCN6-201ENST00000312413 MED18Q9BUE0 208 aa12.52□□□□□ -0.41
CLCN6-201ENST00000312413 P2RY12Q9H244 342 aa12.52□□□□□ -0.41
CLCN6-201ENST00000312413 SLC25A37Q9NYZ2 338 aa12.52□□□□□ -0.41
CLCN6-201ENST00000312413 SLCO1B1Q9Y6L6 691 aa12.52□□□□□ -0.41
CLCN6-201ENST00000312413 ARID1BQ8NFD5 2236 aaPredicted RBP12.52□□□□□ -0.41
CLCN6-201ENST00000312413 EIF4E2O60573 245 aaKnown RBP12.51□□□□□ -0.41
CLCN6-201ENST00000312413 ARNTP27540 789 aa12.51□□□□□ -0.41
CLCN6-201ENST00000312413 OR2T2Q6IF00 324 aa12.51□□□□□ -0.41
CLCN6-201ENST00000312413 OR5AP2Q8NGF4 316 aa12.51□□□□□ -0.41
CLCN6-201ENST00000312413 SMIM7Q9BQ49 75 aa12.51□□□□□ -0.41
CLCN6-201ENST00000312413 CHEK1O14757 476 aa12.51□□□□□ -0.41
CLCN6-201ENST00000312413 PHOX2AO14813 284 aa12.51□□□□□ -0.41
CLCN6-201ENST00000312413 PXNP49023 591 aaPredicted RBP12.51□□□□□ -0.41
CLCN6-201ENST00000312413 RBP2P50120 134 aa12.51□□□□□ -0.41
CLCN6-201ENST00000312413 FAM162BQ5T6X4 162 aa12.51□□□□□ -0.41
CLCN6-201ENST00000312413 TEX261Q6UWH6 196 aa12.51□□□□□ -0.41
CLCN6-201ENST00000312413 ALKAL1Q6UXT8 129 aa12.51□□□□□ -0.41
CLCN6-201ENST00000312413 KLHDC9Q8NEP7 349 aa12.51□□□□□ -0.41
CLCN6-201ENST00000312413 MAP6Q96JE9 813 aa12.51□□□□□ -0.41
CLCN6-201ENST00000312413 PLA2G12AQ9BZM1 189 aa12.51□□□□□ -0.41
CLCN6-201ENST00000312413 ACTR3CQ9C0K3 210 aaPredicted RBP12.51□□□□□ -0.41
CLCN6-201ENST00000312413 CALHM2Q9HA72 323 aa12.51□□□□□ -0.41
CLCN6-201ENST00000312413 LTB4R2Q9NPC1 389 aa12.51□□□□□ -0.41
CLCN6-201ENST00000312413 U3KQ87 197 aa12.51□□□□□ -0.41
CLCN6-201ENST00000312413 PRAMEF25A6NGN4 478 aa12.51□□□□□ -0.41
CLCN6-201ENST00000312413 SLC2A10O95528 541 aa12.51□□□□□ -0.41
CLCN6-201ENST00000312413 CD3DP04234 171 aa12.51□□□□□ -0.41
CLCN6-201ENST00000312413 CLEC3BP05452 202 aa12.51□□□□□ -0.41
CLCN6-201ENST00000312413 GPR85P60893 370 aa12.51□□□□□ -0.41
CLCN6-201ENST00000312413 SPANXN5Q5MJ07 72 aa12.51□□□□□ -0.41
CLCN6-201ENST00000312413 PRAMEF5Q5TYX0 476 aa12.51□□□□□ -0.41
CLCN6-201ENST00000312413 PRAMEF6Q5VXH4 476 aa12.51□□□□□ -0.41
CLCN6-201ENST00000312413 RABEPKQ7Z6M1 372 aa12.51□□□□□ -0.41
CLCN6-201ENST00000312413 LILRA3Q8N6C8 439 aaPredicted RBP12.51□□□□□ -0.41
CLCN6-201ENST00000312413 ZNF296Q8WUU4 475 aaPredicted RBP12.51□□□□□ -0.41
CLCN6-201ENST00000312413 SMIM19Q96E16 107 aa12.51□□□□□ -0.41
CLCN6-201ENST00000312413 AHDC1Q5TGY3 1603 aaPredicted RBP12.51□□□□□ -0.41
CLCN6-201ENST00000312413 LTN1O94822 1766 aa12.51□□□□□ -0.41
CLCN6-201ENST00000312413 TMX2-CTNND1H3BSU7 103 aa12.51□□□□□ -0.41
CLCN6-201ENST00000312413 SPP1P10451 314 aa12.51□□□□□ -0.41
CLCN6-201ENST00000312413 HIST1H1CP16403 213 aaKnown RBP12.51□□□□□ -0.41
CLCN6-201ENST00000312413 IL3RAP26951 378 aa12.51□□□□□ -0.41
CLCN6-201ENST00000312413 SELENBP1Q13228 472 aa12.51□□□□□ -0.41
CLCN6-201ENST00000312413 MANEAQ5SRI9 462 aa12.51□□□□□ -0.41
CLCN6-201ENST00000312413 ANKRD34AQ69YU3 496 aa12.51□□□□□ -0.41
CLCN6-201ENST00000312413 ZNF787Q6DD87 383 aa12.51□□□□□ -0.41
CLCN6-201ENST00000312413 PLXDC2Q6UX71 529 aa12.51□□□□□ -0.41
CLCN6-201ENST00000312413 RIMKLAQ8IXN7 391 aa12.51□□□□□ -0.41
CLCN6-201ENST00000312413 GALNT16Q8N428 558 aa12.51□□□□□ -0.41
CLCN6-201ENST00000312413 RXFP4Q8TDU9 374 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms