RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 RAB11BQ15907 218 aa16.29■□□□□ 0.2
SPSB4-201ENST00000310546 ALG11Q2TAA5 492 aa16.29■□□□□ 0.2
SPSB4-201ENST00000310546 RTL10Q7L3V2 364 aa16.29■□□□□ 0.2
SPSB4-201ENST00000310546 ZNF619Q8N2I2 560 aa16.29■□□□□ 0.2
SPSB4-201ENST00000310546 ZNF565Q8N9K5 539 aa16.29■□□□□ 0.2
SPSB4-201ENST00000310546 DTD2Q96FN9 168 aa16.29■□□□□ 0.2
SPSB4-201ENST00000310546 MARS2Q96GW9 593 aaKnown RBP16.29■□□□□ 0.2
SPSB4-201ENST00000310546 ALG12Q9BV10 488 aa16.29■□□□□ 0.2
SPSB4-201ENST00000310546 PARP12Q9H0J9 701 aaKnown RBP16.29■□□□□ 0.2
SPSB4-201ENST00000310546 DEC1Q9P2X7 70 aa16.29■□□□□ 0.2
SPSB4-201ENST00000310546 WIF1Q9Y5W5 379 aa16.29■□□□□ 0.2
SPSB4-201ENST00000310546 LOC100289279A0A1B0GTE1 492 aa16.29■□□□□ 0.2
SPSB4-201ENST00000310546 URADA6NGE7 173 aa16.29■□□□□ 0.2
SPSB4-201ENST00000310546 MBTPS2O43462 519 aa16.29■□□□□ 0.2
SPSB4-201ENST00000310546 CD5P06127 495 aa16.29■□□□□ 0.2
SPSB4-201ENST00000310546 ERCC1P07992 297 aaPredicted RBP16.29■□□□□ 0.2
SPSB4-201ENST00000310546 ALG10BQ5I7T1 473 aa16.29■□□□□ 0.2
SPSB4-201ENST00000310546 BHLHE23Q8NDY6 225 aa16.29■□□□□ 0.2
SPSB4-201ENST00000310546 SLC39A7Q92504 469 aa16.29■□□□□ 0.2
SPSB4-201ENST00000310546 SMARCD2Q92925 531 aa16.29■□□□□ 0.2
SPSB4-201ENST00000310546 RNF126Q9BV68 326 aa16.29■□□□□ 0.2
SPSB4-201ENST00000310546 OPA3Q9H6K4 179 aa16.29■□□□□ 0.2
SPSB4-201ENST00000310546 FLRT3Q9NZU0 649 aa16.29■□□□□ 0.2
SPSB4-201ENST00000310546 A0A1W2PPC1 479 aa16.28■□□□□ 0.2
SPSB4-201ENST00000310546 CXorf65A6NEN9 183 aa16.28■□□□□ 0.2
SPSB4-201ENST00000310546 FBXO24O75426 580 aa16.28■□□□□ 0.2
SPSB4-201ENST00000310546 ITGA3P26006 1051 aa16.28■□□□□ 0.2
SPSB4-201ENST00000310546 TMEM35AQ53FP2 167 aa16.28■□□□□ 0.2
SPSB4-201ENST00000310546 EXOSC6Q5RKV6 272 aaKnown RBP16.28■□□□□ 0.2
SPSB4-201ENST00000310546 SLC25A42Q86VD7 318 aa16.28■□□□□ 0.2
SPSB4-201ENST00000310546 AMZ2Q86W34 360 aa16.28■□□□□ 0.2
SPSB4-201ENST00000310546 FRMD1Q8N878 549 aa16.28■□□□□ 0.2
SPSB4-201ENST00000310546 COMMD4Q9H0A8 199 aa16.28■□□□□ 0.2
SPSB4-201ENST00000310546 PCBD2Q9H0N5 130 aa16.28■□□□□ 0.2
SPSB4-201ENST00000310546 MYOZ1Q9NP98 299 aaPredicted RBP16.28■□□□□ 0.2
SPSB4-201ENST00000310546 GTF2A1LQ9UNN4 478 aa16.28■□□□□ 0.2
SPSB4-201ENST00000310546 TIMM10BQ9Y5J6 103 aa16.28■□□□□ 0.2
SPSB4-201ENST00000310546 TRBV5-5A0A0J9YX44 114 aa16.28■□□□□ 0.2
SPSB4-201ENST00000310546 TMEM235A6NFC5 223 aa16.28■□□□□ 0.2
SPSB4-201ENST00000310546 S100A2P29034 98 aa16.28■□□□□ 0.2
SPSB4-201ENST00000310546 ID2Q02363 134 aa16.28■□□□□ 0.2
SPSB4-201ENST00000310546 TRMT12Q53H54 448 aaKnown RBP16.28■□□□□ 0.2
SPSB4-201ENST00000310546 DCST2Q5T1A1 773 aa16.28■□□□□ 0.2
SPSB4-201ENST00000310546 ARRDC1Q8N5I2 433 aa16.28■□□□□ 0.2
SPSB4-201ENST00000310546 ADAD2Q8NCV1 583 aaKnown RBP16.28■□□□□ 0.2
SPSB4-201ENST00000310546 AKR7LQ8NHP1 331 aa16.28■□□□□ 0.2
SPSB4-201ENST00000310546 GPR148Q8TDV2 347 aa16.28■□□□□ 0.2
SPSB4-201ENST00000310546 SMIM8Q96KF7 97 aa16.28■□□□□ 0.2
SPSB4-201ENST00000310546 TEX101Q9BY14 249 aa16.28■□□□□ 0.2
SPSB4-201ENST00000310546 TGIF2Q9GZN2 237 aa16.28■□□□□ 0.2
SPSB4-201ENST00000310546 RGCCQ9H4X1 137 aa16.28■□□□□ 0.2
SPSB4-201ENST00000310546 IL36AQ9UHA7 158 aa16.28■□□□□ 0.2
SPSB4-201ENST00000310546 H0YIZ8 118 aa16.27■□□□□ 0.2
SPSB4-201ENST00000310546 P2RX6O15547 441 aa16.27■□□□□ 0.2
SPSB4-201ENST00000310546 AGR2O95994 175 aa16.27■□□□□ 0.2
SPSB4-201ENST00000310546 IFNA2P01563 188 aa16.27■□□□□ 0.2
SPSB4-201ENST00000310546 FCGR3AP08637 254 aa16.27■□□□□ 0.2
SPSB4-201ENST00000310546 CISD3P0C7P0 127 aa16.27■□□□□ 0.2
SPSB4-201ENST00000310546 BTN3A2P78410 334 aa16.27■□□□□ 0.2
SPSB4-201ENST00000310546 SSBP1Q04837 148 aaKnown RBP16.27■□□□□ 0.2
SPSB4-201ENST00000310546 C2orf27AQ580R0 203 aa16.27■□□□□ 0.2
SPSB4-201ENST00000310546 ZNF684Q5T5D7 378 aa16.27■□□□□ 0.2
SPSB4-201ENST00000310546 PAPD4Q6PIY7 484 aaKnown RBP16.27■□□□□ 0.2
SPSB4-201ENST00000310546 PARS2Q7L3T8 475 aaKnown RBP16.27■□□□□ 0.2
SPSB4-201ENST00000310546 ZNF761Q86XN6 746 aaPredicted RBP16.27■□□□□ 0.2
SPSB4-201ENST00000310546 NKD1Q969G9 470 aa16.27■□□□□ 0.2
SPSB4-201ENST00000310546 TVP23AA6NH52 213 aa16.27■□□□□ 0.19
SPSB4-201ENST00000310546 ARGFXA6NJG6 315 aa16.27■□□□□ 0.19
SPSB4-201ENST00000310546 EIF1AYO14602 144 aaKnown RBP16.27■□□□□ 0.19
SPSB4-201ENST00000310546 PPICP45877 212 aa16.27■□□□□ 0.19
SPSB4-201ENST00000310546 EIF1AXP47813 144 aaKnown RBP16.27■□□□□ 0.19
SPSB4-201ENST00000310546 SSX2Q16385 188 aa16.27■□□□□ 0.19
SPSB4-201ENST00000310546 EEF1A1P5Q5VTE0 462 aa16.27■□□□□ 0.19
SPSB4-201ENST00000310546 LEG1Q6P5S2 330 aa16.27■□□□□ 0.19
SPSB4-201ENST00000310546 VITQ6UXI7 678 aa16.27■□□□□ 0.19
SPSB4-201ENST00000310546 ZNF584Q8IVC4 421 aa16.27■□□□□ 0.19
SPSB4-201ENST00000310546 COX18Q8N8Q8 333 aa16.27■□□□□ 0.19
SPSB4-201ENST00000310546 ADAMTS17Q8TE56 1095 aa16.27■□□□□ 0.19
SPSB4-201ENST00000310546 SAT2Q96F10 170 aaPredicted RBP16.27■□□□□ 0.19
SPSB4-201ENST00000310546 NRSN2Q9GZP1 204 aa16.27■□□□□ 0.19
SPSB4-201ENST00000310546 KCNG2Q9UJ96 466 aa16.27■□□□□ 0.19
SPSB4-201ENST00000310546 DCTN6O00399 190 aa16.26■□□□□ 0.19
SPSB4-201ENST00000310546 OR8U9P0C7N5 309 aa16.26■□□□□ 0.19
SPSB4-201ENST00000310546 HLA-GP17693 338 aa16.26■□□□□ 0.19
SPSB4-201ENST00000310546 GDI1P31150 447 aa16.26■□□□□ 0.19
SPSB4-201ENST00000310546 LSSP48449 732 aa16.26■□□□□ 0.19
SPSB4-201ENST00000310546 SCAND1P57086 179 aa16.26■□□□□ 0.19
SPSB4-201ENST00000310546 PRDX1Q06830 199 aaKnown RBP16.26■□□□□ 0.19
SPSB4-201ENST00000310546 HYAL1Q12794 435 aa16.26■□□□□ 0.19
SPSB4-201ENST00000310546 ARHGAP19Q14CB8 494 aa16.26■□□□□ 0.19
SPSB4-201ENST00000310546 RNASE10Q5GAN6 216 aaKnown RBP16.26■□□□□ 0.19
SPSB4-201ENST00000310546 BEND4Q6ZU67 534 aa16.26■□□□□ 0.19
SPSB4-201ENST00000310546 LRRC25Q8N386 305 aaPredicted RBP16.26■□□□□ 0.19
SPSB4-201ENST00000310546 OR2L5Q8NG80 312 aa16.26■□□□□ 0.19
SPSB4-201ENST00000310546 OR2G2Q8NGZ5 317 aa16.26■□□□□ 0.19
SPSB4-201ENST00000310546 OR8U1Q8NH10 309 aa16.26■□□□□ 0.19
SPSB4-201ENST00000310546 SUSD6Q92537 303 aa16.26■□□□□ 0.19
SPSB4-201ENST00000310546 ZNF426Q9BUY5 554 aa16.26■□□□□ 0.19
SPSB4-201ENST00000310546 GFOD1Q9NXC2 390 aa16.26■□□□□ 0.19
SPSB4-201ENST00000310546 KLK13Q9UKR3 277 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms