RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 KCNMB1Q16558 191 aa18.87■□□□□ 0.61
ATG4D-201ENST00000309469 ASB18Q6ZVZ8 466 aa18.87■□□□□ 0.61
ATG4D-201ENST00000309469 LRRTM1Q86UE6 522 aa18.87■□□□□ 0.61
ATG4D-201ENST00000309469 OR4M2Q8NGB6 313 aa18.87■□□□□ 0.61
ATG4D-201ENST00000309469 ZNF671Q8TAW3 534 aa18.87■□□□□ 0.61
ATG4D-201ENST00000309469 TMEM54Q969K7 222 aa18.87■□□□□ 0.61
ATG4D-201ENST00000309469 SF3B5Q9BWJ5 86 aaKnown RBP18.87■□□□□ 0.61
ATG4D-201ENST00000309469 LHFPL6Q9Y693 200 aa18.87■□□□□ 0.61
ATG4D-201ENST00000309469 ADRA2CP18825 462 aa18.86■□□□□ 0.61
ATG4D-201ENST00000309469 EIF1AXP47813 144 aaKnown RBP18.86■□□□□ 0.61
ATG4D-201ENST00000309469 HES5Q5TA89 166 aa18.86■□□□□ 0.61
ATG4D-201ENST00000309469 UBQLNLQ8IYU4 475 aa18.86■□□□□ 0.61
ATG4D-201ENST00000309469 ZIC4Q8N9L1 334 aa18.86■□□□□ 0.61
ATG4D-201ENST00000309469 OR6N1Q8NGY5 312 aa18.86■□□□□ 0.61
ATG4D-201ENST00000309469 ADGRG7Q96K78 797 aa18.86■□□□□ 0.61
ATG4D-201ENST00000309469 KCNJ15Q99712 375 aa18.86■□□□□ 0.61
ATG4D-201ENST00000309469 HES7Q9BYE0 225 aa18.86■□□□□ 0.61
ATG4D-201ENST00000309469 OR52A1Q9UKL2 312 aa18.86■□□□□ 0.61
ATG4D-201ENST00000309469 TRAV8-7A0A075B6U6 113 aa18.86■□□□□ 0.61
ATG4D-201ENST00000309469 TMEM269A0A1B0GVZ9 245 aa18.86■□□□□ 0.61
ATG4D-201ENST00000309469 POU3F2P20265 443 aaPredicted RBP18.86■□□□□ 0.61
ATG4D-201ENST00000309469 RFX2P48378 723 aa18.86■□□□□ 0.61
ATG4D-201ENST00000309469 PITPNBP48739 271 aa18.86■□□□□ 0.61
ATG4D-201ENST00000309469 SUCLG1P53597 346 aaKnown RBP18.86■□□□□ 0.61
ATG4D-201ENST00000309469 GFRA1P56159 465 aa18.86■□□□□ 0.61
ATG4D-201ENST00000309469 ATP1A1-AS1Q5TC04 95 aa18.86■□□□□ 0.61
ATG4D-201ENST00000309469 TRIQKQ629K1 86 aa18.86■□□□□ 0.61
ATG4D-201ENST00000309469 SULF2Q8IWU5 870 aa18.86■□□□□ 0.61
ATG4D-201ENST00000309469 DTX3Q8N9I9 347 aa18.86■□□□□ 0.61
ATG4D-201ENST00000309469 OR2AJ1Q8NGZ0 328 aa18.86■□□□□ 0.61
ATG4D-201ENST00000309469 OR2V1Q8NHB1 315 aa18.86■□□□□ 0.61
ATG4D-201ENST00000309469 FAM210AQ96ND0 272 aa18.86■□□□□ 0.61
ATG4D-201ENST00000309469 G6PC2Q9NQR9 355 aa18.86■□□□□ 0.61
ATG4D-201ENST00000309469 GDF2Q9UK05 429 aaPredicted RBP18.86■□□□□ 0.61
ATG4D-201ENST00000309469 POLR1DQ9Y2S0 133 aa18.86■□□□□ 0.61
ATG4D-201ENST00000309469 A0A1B0GVC2 190 aa18.85■□□□□ 0.61
ATG4D-201ENST00000309469 A6NIN4 97 aa18.85■□□□□ 0.61
ATG4D-201ENST00000309469 HLA-DQB1P01920 261 aa18.85■□□□□ 0.61
ATG4D-201ENST00000309469 TMEM123Q8N131 208 aa18.85■□□□□ 0.61
ATG4D-201ENST00000309469 CELF2-AS1Q8N7Q2 184 aa18.85■□□□□ 0.61
ATG4D-201ENST00000309469 OR10S1Q8NGN2 331 aa18.85■□□□□ 0.61
ATG4D-201ENST00000309469 LGALS14Q8TCE9 139 aa18.85■□□□□ 0.61
ATG4D-201ENST00000309469 CMTM3Q96MX0 182 aa18.85■□□□□ 0.61
ATG4D-201ENST00000309469 SLC22A4Q9H015 551 aa18.85■□□□□ 0.61
ATG4D-201ENST00000309469 B4GALT7Q9UBV7 327 aa18.85■□□□□ 0.61
ATG4D-201ENST00000309469 FREM3P0C091 2139 aa18.84■□□□□ 0.61
ATG4D-201ENST00000309469 CXCL13O43927 109 aa18.84■□□□□ 0.61
ATG4D-201ENST00000309469 SLC43A1O75387 559 aa18.84■□□□□ 0.61
ATG4D-201ENST00000309469 DCTDP32321 178 aa18.84■□□□□ 0.61
ATG4D-201ENST00000309469 MMP16P51512 607 aa18.84■□□□□ 0.61
ATG4D-201ENST00000309469 ZNF133P52736 654 aaPredicted RBP18.84■□□□□ 0.61
ATG4D-201ENST00000309469 PHYHD1Q5SRE7 291 aa18.84■□□□□ 0.61
ATG4D-201ENST00000309469 CFAP77Q6ZQR2 320 aa18.84■□□□□ 0.61
ATG4D-201ENST00000309469 GALNT16Q8N428 558 aa18.84■□□□□ 0.61
ATG4D-201ENST00000309469 C19orf18Q8NEA5 215 aa18.84■□□□□ 0.61
ATG4D-201ENST00000309469 OR10D3Q8NH80 312 aa18.84■□□□□ 0.61
ATG4D-201ENST00000309469 ZNF703Q9H7S9 590 aaPredicted RBP18.84■□□□□ 0.61
ATG4D-201ENST00000309469 ASCL3Q9NQ33 180 aa18.84■□□□□ 0.61
ATG4D-201ENST00000309469 CLEC4AQ9UMR7 237 aa18.84■□□□□ 0.61
ATG4D-201ENST00000309469 DHDHQ9UQ10 334 aa18.84■□□□□ 0.61
ATG4D-201ENST00000309469 AHCTF1Q8WYP5 2266 aa18.84■□□□□ 0.61
ATG4D-201ENST00000309469 MED12Q93074 2177 aa18.84■□□□□ 0.61
ATG4D-201ENST00000309469 LINC01387J3KSC0 135 aa18.84■□□□□ 0.61
ATG4D-201ENST00000309469 MAS1P04201 325 aa18.84■□□□□ 0.61
ATG4D-201ENST00000309469 ISG15P05161 165 aa18.84■□□□□ 0.61
ATG4D-201ENST00000309469 HPNP05981 417 aa18.84■□□□□ 0.61
ATG4D-201ENST00000309469 CLDN15P56746 228 aa18.84■□□□□ 0.61
ATG4D-201ENST00000309469 C10orf128Q5T292 105 aa18.84■□□□□ 0.61
ATG4D-201ENST00000309469 KLHL24Q6TFL4 600 aa18.84■□□□□ 0.61
ATG4D-201ENST00000309469 ZNF704Q6ZNC4 412 aaPredicted RBP18.84■□□□□ 0.61
ATG4D-201ENST00000309469 ASB5Q8WWX0 329 aa18.84■□□□□ 0.61
ATG4D-201ENST00000309469 INTS12Q96CB8 462 aaKnown RBP18.84■□□□□ 0.61
ATG4D-201ENST00000309469 NEDD4LQ96PU5 975 aa18.84■□□□□ 0.61
ATG4D-201ENST00000309469 PRRX2Q99811 253 aa18.84■□□□□ 0.61
ATG4D-201ENST00000309469 C11orf54Q9H0W9 315 aaPredicted RBP18.84■□□□□ 0.61
ATG4D-201ENST00000309469 PCDHGA9Q9Y5G4 932 aaKnown RBP18.84■□□□□ 0.61
ATG4D-201ENST00000309469 KNTC1P50748 2209 aa18.84■□□□□ 0.61
ATG4D-201ENST00000309469 PLA2G10O15496 165 aa18.83■□□□□ 0.6
ATG4D-201ENST00000309469 RFC3P40938 356 aa18.83■□□□□ 0.6
ATG4D-201ENST00000309469 NBL1P41271 181 aa18.83■□□□□ 0.6
ATG4D-201ENST00000309469 SELENOPP49908 381 aa18.83■□□□□ 0.6
ATG4D-201ENST00000309469 CD300CQ08708 224 aa18.83■□□□□ 0.6
ATG4D-201ENST00000309469 PNPLA2Q96AD5 504 aa18.83■□□□□ 0.6
ATG4D-201ENST00000309469 WACQ9BTA9 647 aa18.83■□□□□ 0.6
ATG4D-201ENST00000309469 MRI1Q9BV20 369 aa18.83■□□□□ 0.6
ATG4D-201ENST00000309469 FAM206AQ9NX38 181 aa18.83■□□□□ 0.6
ATG4D-201ENST00000309469 ASH2LQ9UBL3 628 aa18.83■□□□□ 0.6
ATG4D-201ENST00000309469 DOCK10Q96BY6 2186 aa18.83■□□□□ 0.6
ATG4D-201ENST00000309469 ARGFXA6NJG6 315 aa18.82■□□□□ 0.6
ATG4D-201ENST00000309469 ANXA2P2A6NMY6 339 aa18.82■□□□□ 0.6
ATG4D-201ENST00000309469 ANXA2P07355 339 aaKnown RBP18.82■□□□□ 0.6
ATG4D-201ENST00000309469 ACHEP22303 614 aa18.82■□□□□ 0.6
ATG4D-201ENST00000309469 UBE2NLQ5JXB2 153 aa18.82■□□□□ 0.6
ATG4D-201ENST00000309469 BCL2L15Q5TBC7 163 aa18.82■□□□□ 0.6
ATG4D-201ENST00000309469 PYHIN1Q6K0P9 492 aa18.82■□□□□ 0.6
ATG4D-201ENST00000309469 RHOUQ7L0Q8 258 aa18.82■□□□□ 0.6
ATG4D-201ENST00000309469 DNAAF1Q8NEP3 725 aa18.82■□□□□ 0.6
ATG4D-201ENST00000309469 HPS1Q92902 700 aa18.82■□□□□ 0.6
ATG4D-201ENST00000309469 LIN7BQ9HAP6 207 aa18.82■□□□□ 0.6
ATG4D-201ENST00000309469 FOXD3Q9UJU5 478 aaPredicted RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms