RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 TENM4Q6N022 2769 aa7.33□□□□□ -1.24
CHD6-201ENST00000309279 WIPF3A6NGB9 483 aa7.32□□□□□ -1.24
CHD6-201ENST00000309279 C5orf52A6NGY3 159 aa7.32□□□□□ -1.24
CHD6-201ENST00000309279 ARPC2O15144 300 aa7.32□□□□□ -1.24
CHD6-201ENST00000309279 WDR1O75083 606 aa7.32□□□□□ -1.24
CHD6-201ENST00000309279 SERPINA1P01009 418 aa7.32□□□□□ -1.24
CHD6-201ENST00000309279 THBDP07204 575 aa7.32□□□□□ -1.24
CHD6-201ENST00000309279 RNF224P0DH78 156 aa7.32□□□□□ -1.24
CHD6-201ENST00000309279 GP1BBP13224 206 aa7.32□□□□□ -1.24
CHD6-201ENST00000309279 GNLYP22749 145 aa7.32□□□□□ -1.24
CHD6-201ENST00000309279 HTR2AP28223 471 aa7.32□□□□□ -1.24
CHD6-201ENST00000309279 BDKRB2P30411 391 aa7.32□□□□□ -1.24
CHD6-201ENST00000309279 PTGER4P35408 488 aa7.32□□□□□ -1.24
CHD6-201ENST00000309279 CA7P43166 264 aa7.32□□□□□ -1.24
CHD6-201ENST00000309279 MAGEB1P43366 347 aa7.32□□□□□ -1.24
CHD6-201ENST00000309279 UQCRFS1P47985 274 aa7.32□□□□□ -1.24
CHD6-201ENST00000309279 POLR2HP52434 150 aaKnown RBP7.32□□□□□ -1.24
CHD6-201ENST00000309279 IST1P53990 364 aa7.32□□□□□ -1.24
CHD6-201ENST00000309279 RGS8P57771 180 aaPredicted RBP7.32□□□□□ -1.24
CHD6-201ENST00000309279 HOXC5Q00444 222 aa7.32□□□□□ -1.24
CHD6-201ENST00000309279 MS4A2Q01362 244 aa7.32□□□□□ -1.24
CHD6-201ENST00000309279 SELENBP1Q13228 472 aa7.32□□□□□ -1.24
CHD6-201ENST00000309279 EIF2S3LQ2VIR3 472 aaKnown RBP7.32□□□□□ -1.24
CHD6-201ENST00000309279 KLHL22Q53GT1 634 aa7.32□□□□□ -1.24
CHD6-201ENST00000309279 ASRGL1Q7L266 308 aa7.32□□□□□ -1.24
CHD6-201ENST00000309279 ABHD12BQ7Z5M8 362 aaPredicted RBP7.32□□□□□ -1.24
CHD6-201ENST00000309279 ADGRE4PQ86SQ3 457 aa7.32□□□□□ -1.24
CHD6-201ENST00000309279 LHFPL3Q86UP9 236 aa7.32□□□□□ -1.24
CHD6-201ENST00000309279 GGNQ86UU5 652 aa7.32□□□□□ -1.24
CHD6-201ENST00000309279 RANBP3LQ86VV4 465 aaPredicted RBP7.32□□□□□ -1.24
CHD6-201ENST00000309279 LACC1Q8IV20 430 aa7.32□□□□□ -1.24
CHD6-201ENST00000309279 EID3Q8N140 333 aa7.32□□□□□ -1.24
CHD6-201ENST00000309279 LILRA2Q8N149 483 aa7.32□□□□□ -1.24
CHD6-201ENST00000309279 TMEM104Q8NE00 496 aa7.32□□□□□ -1.24
CHD6-201ENST00000309279 OR4D11Q8NGI4 311 aa7.32□□□□□ -1.24
CHD6-201ENST00000309279 OR10J5Q8NHC4 309 aa7.32□□□□□ -1.24
CHD6-201ENST00000309279 TBC1D15Q8TC07 691 aa7.32□□□□□ -1.24
CHD6-201ENST00000309279 ZPLD1Q8TCW7 415 aa7.32□□□□□ -1.24
CHD6-201ENST00000309279 PHF10Q8WUB8 498 aaKnown RBP7.32□□□□□ -1.24
CHD6-201ENST00000309279 HPS1Q92902 700 aa7.32□□□□□ -1.24
CHD6-201ENST00000309279 ASB9Q96DX5 294 aa7.32□□□□□ -1.24
CHD6-201ENST00000309279 CLPTM1LQ96KA5 538 aa7.32□□□□□ -1.24
CHD6-201ENST00000309279 ZNF559Q9BR84 538 aa7.32□□□□□ -1.24
CHD6-201ENST00000309279 DGCR6LQ9BY27 220 aa7.32□□□□□ -1.24
CHD6-201ENST00000309279 CADM1Q9BY67 442 aaKnown RBP7.32□□□□□ -1.24
CHD6-201ENST00000309279 CLEC4MQ9H2X3 399 aaPredicted RBP7.32□□□□□ -1.24
CHD6-201ENST00000309279 ERVK13-1Q9NX77 482 aa7.32□□□□□ -1.24
CHD6-201ENST00000309279 CNOT2Q9NZN8 540 aaKnown RBP7.32□□□□□ -1.24
CHD6-201ENST00000309279 OR6C3Q9NZP0 311 aa7.32□□□□□ -1.24
CHD6-201ENST00000309279 UBQLN2Q9UHD9 624 aa7.32□□□□□ -1.24
CHD6-201ENST00000309279 SCOCQ9UIL1 159 aa7.32□□□□□ -1.24
CHD6-201ENST00000309279 SAMD4AQ9UPU9 718 aaKnown RBP7.32□□□□□ -1.24
CHD6-201ENST00000309279 MGAT4BQ9UQ53 548 aa7.32□□□□□ -1.24
CHD6-201ENST00000309279 OSGIN2Q9Y236 505 aa7.32□□□□□ -1.24
CHD6-201ENST00000309279 COL12A1Q99715 3063 aa7.32□□□□□ -1.24
CHD6-201ENST00000309279 USP9XQ93008 2570 aaPredicted RBP7.32□□□□□ -1.24
CHD6-201ENST00000309279 GCN1Q92616 2671 aaKnown RBP7.32□□□□□ -1.24
CHD6-201ENST00000309279 MED12LQ86YW9 2145 aa7.32□□□□□ -1.24
CHD6-201ENST00000309279 A0A0B4J2E0 115 aa7.31□□□□□ -1.24
CHD6-201ENST00000309279 A0A1B0GX12 115 aa7.31□□□□□ -1.24
CHD6-201ENST00000309279 ZNF729A6NN14 1252 aaPredicted RBP7.31□□□□□ -1.24
CHD6-201ENST00000309279 GJE1A6NN92 205 aa7.31□□□□□ -1.24
CHD6-201ENST00000309279 FAM171A2A8MVW0 826 aa7.31□□□□□ -1.24
CHD6-201ENST00000309279 ACOT8O14734 319 aa7.31□□□□□ -1.24
CHD6-201ENST00000309279 SELENOFO60613 162 aa7.31□□□□□ -1.24
CHD6-201ENST00000309279 SEMA7AO75326 666 aa7.31□□□□□ -1.24
CHD6-201ENST00000309279 APOC1P02654 83 aa7.31□□□□□ -1.24
CHD6-201ENST00000309279 AMY2AP04746 511 aa7.31□□□□□ -1.24
CHD6-201ENST00000309279 GPIP06744 558 aa7.31□□□□□ -1.24
CHD6-201ENST00000309279 PSKH1P11801 424 aa7.31□□□□□ -1.24
CHD6-201ENST00000309279 GABRA1P14867 456 aa7.31□□□□□ -1.24
CHD6-201ENST00000309279 AMY2BP19961 511 aa7.31□□□□□ -1.24
CHD6-201ENST00000309279 NKX2-5P52952 324 aaPredicted RBP7.31□□□□□ -1.24
CHD6-201ENST00000309279 CLDN20P56880 219 aa7.31□□□□□ -1.24
CHD6-201ENST00000309279 NCALDP61601 193 aa7.31□□□□□ -1.24
CHD6-201ENST00000309279 BDH1Q02338 343 aa7.31□□□□□ -1.24
CHD6-201ENST00000309279 TESK1Q15569 626 aa7.31□□□□□ -1.24
CHD6-201ENST00000309279 OR1Q1Q15612 314 aa7.31□□□□□ -1.24
CHD6-201ENST00000309279 C3AR1Q16581 482 aa7.31□□□□□ -1.24
CHD6-201ENST00000309279 CTU2Q2VPK5 515 aaKnown RBP7.31□□□□□ -1.24
CHD6-201ENST00000309279 MTX3Q5HYI7 312 aa7.31□□□□□ -1.24
CHD6-201ENST00000309279 RTL6Q6ICC9 239 aa7.31□□□□□ -1.24
CHD6-201ENST00000309279 LCN8Q6JVE9 175 aa7.31□□□□□ -1.24
CHD6-201ENST00000309279 HMBOX1Q6NT76 420 aa7.31□□□□□ -1.24
CHD6-201ENST00000309279 ZNF613Q6PF04 617 aa7.31□□□□□ -1.24
CHD6-201ENST00000309279 ULK3Q6PHR2 472 aa7.31□□□□□ -1.24
CHD6-201ENST00000309279 ESPNLQ6ZVH7 1005 aa7.31□□□□□ -1.24
CHD6-201ENST00000309279 ATG4DQ86TL0 474 aaPredicted RBP7.31□□□□□ -1.24
CHD6-201ENST00000309279 CD163Q86VB7 1156 aa7.31□□□□□ -1.24
CHD6-201ENST00000309279 CARM1Q86X55 608 aa7.31□□□□□ -1.24
CHD6-201ENST00000309279 C17orf78Q8N4C9 275 aa7.31□□□□□ -1.24
CHD6-201ENST00000309279 NUDT10Q8NFP7 164 aa7.31□□□□□ -1.24
CHD6-201ENST00000309279 OR5M9Q8NGP3 310 aa7.31□□□□□ -1.24
CHD6-201ENST00000309279 OR10Q1Q8NGQ4 319 aa7.31□□□□□ -1.24
CHD6-201ENST00000309279 OR13C9Q8NGT0 318 aa7.31□□□□□ -1.24
CHD6-201ENST00000309279 SLC25A43Q8WUT9 341 aaPredicted RBP7.31□□□□□ -1.24
CHD6-201ENST00000309279 AKAP1Q92667 903 aaKnown RBP eCLIP7.31□□□□□ -1.24
CHD6-201ENST00000309279 SLC38A4Q969I6 547 aa7.31□□□□□ -1.24
CHD6-201ENST00000309279 ST6GALNAC6Q969X2 333 aa7.31□□□□□ -1.24
CHD6-201ENST00000309279 ADGRG7Q96K78 797 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms