RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 OR6C1Q96RD1 312 aa9.32□□□□□ -0.92
APOBEC3F-201ENST00000308521 SMAD5Q99717 465 aaKnown RBP9.32□□□□□ -0.92
APOBEC3F-201ENST00000308521 CRB3Q9BUF7 120 aa9.32□□□□□ -0.92
APOBEC3F-201ENST00000308521 APMAPQ9HDC9 416 aa9.32□□□□□ -0.92
APOBEC3F-201ENST00000308521 CARHSP1Q9Y2V2 147 aaKnown RBP9.32□□□□□ -0.92
APOBEC3F-201ENST00000308521 F5H5P2 479 aa9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 PYCARD-AS1I3L0S3 204 aa9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 ARPC5O15511 151 aa9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 GLSO94925 669 aaPredicted RBP9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 PSMB10P40306 273 aa9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 NAA10P41227 235 aaPredicted RBP9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 MAP3K8P41279 467 aa9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 PTGFRP43088 359 aa9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 EMDP50402 254 aa9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 GMFBP60983 142 aa9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 SKP1P63208 163 aa9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 RNF4P78317 190 aa9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 PSG6Q00889 435 aa9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 PLAURQ03405 335 aa9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 LINC00114Q6XXX2 140 aa9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 GLB1L2Q8IW92 636 aa9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 ZNF595Q8IYB9 648 aa9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 DND1Q8IYX4 353 aaKnown RBP9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 SDR9C7Q8NEX9 313 aa9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 OR4K13Q8NH42 304 aa9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 IFI44Q8TCB0 444 aa9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 WDR89Q96FK6 387 aaPredicted RBP9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 ZC3H10Q96K80 434 aaKnown RBP9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 LMF1Q96S06 567 aa9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 TRIM2Q9C040 744 aa9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 ARL6Q9H0F7 186 aa9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 SLITRK2Q9H156 845 aa9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 SLC25A18Q9H1K4 315 aa9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 EXOSC3Q9NQT5 275 aaKnown RBP9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 FLRT3Q9NZU0 649 aa9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 R4GN57 208 aa9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 TNRC6BQ9UPQ9 1833 aaKnown RBP9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 IGHV5-10-1A0A0J9YXX1 117 aa9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 A0A1B0GWA3 101 aa9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 ACOD1A6NK06 481 aa9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 TERTO14746 1132 aaKnown RBP9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 SLC31A2O15432 143 aa9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 BRINP1O60477 761 aa9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 SP9P0CG40 484 aa9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 RPA2P15927 270 aa9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 TSPAN7P41732 249 aa9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 SMCO1Q147U7 214 aa9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 ISXQ2M1V0 245 aa9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 KLHL26Q53HC5 615 aa9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 DNLZQ5SXM8 178 aa9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 ZNF684Q5T5D7 378 aa9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 PHF19Q5T6S3 580 aa9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 ARHGAP40Q5TG30 622 aa9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 FAM69BQ5VUD6 431 aa9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 ZNF660Q6AZW8 331 aaPredicted RBP9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 LRRN1Q6UXK5 716 aa9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 LDLRAD3Q86YD5 345 aa9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 ZNF433Q8N7K0 673 aaPredicted RBP9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 BPIFCQ8NFQ6 507 aa9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 OR2AK2Q8NG84 335 aa9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 RGP1Q92546 391 aaPredicted RBP9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 OR1F2PQ96R84 312 aa9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 CMSS1Q9BQ75 279 aaKnown RBP9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 EDEM2Q9BV94 578 aa9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 NMNAT2Q9BZQ4 307 aa9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 LANCL2Q9NS86 450 aa9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 TAS2R8Q9NYW2 309 aa9.31□□□□□ -0.92
APOBEC3F-201ENST00000308521 C17orf105B2RV13 164 aa9.3□□□□□ -0.92
APOBEC3F-201ENST00000308521 H0YIG0 161 aa9.3□□□□□ -0.92
APOBEC3F-201ENST00000308521 H7C417 338 aa9.3□□□□□ -0.92
APOBEC3F-201ENST00000308521 IGKV1D-16P01601 117 aa9.3□□□□□ -0.92
APOBEC3F-201ENST00000308521 CRYBA1P05813 215 aa9.3□□□□□ -0.92
APOBEC3F-201ENST00000308521 GUSBP08236 651 aa9.3□□□□□ -0.92
APOBEC3F-201ENST00000308521 SERTAD2Q14140 314 aa9.3□□□□□ -0.92
APOBEC3F-201ENST00000308521 NDUFAF6Q330K2 333 aa9.3□□□□□ -0.92
APOBEC3F-201ENST00000308521 OR2B11Q5JQS5 317 aa9.3□□□□□ -0.92
APOBEC3F-201ENST00000308521 STAC2Q6ZMT1 411 aa9.3□□□□□ -0.92
APOBEC3F-201ENST00000308521 MOB3CQ70IA8 216 aa9.3□□□□□ -0.92
APOBEC3F-201ENST00000308521 C16orf52Q8NHV5 167 aa9.3□□□□□ -0.92
APOBEC3F-201ENST00000308521 GRHL3Q8TE85 626 aa9.3□□□□□ -0.92
APOBEC3F-201ENST00000308521 RNF166Q96A37 237 aaPredicted RBP9.3□□□□□ -0.92
APOBEC3F-201ENST00000308521 CCDC74BQ96LY2 380 aa9.3□□□□□ -0.92
APOBEC3F-201ENST00000308521 DMRTA2Q96SC8 542 aa9.3□□□□□ -0.92
APOBEC3F-201ENST00000308521 OR8D2Q9GZM6 311 aa9.3□□□□□ -0.92
APOBEC3F-201ENST00000308521 EGLN1Q9GZT9 426 aa9.3□□□□□ -0.92
APOBEC3F-201ENST00000308521 CCDC86Q9H6F5 360 aaKnown RBP9.3□□□□□ -0.92
APOBEC3F-201ENST00000308521 TAS2R3Q9NYW6 316 aa9.3□□□□□ -0.92
APOBEC3F-201ENST00000308521 PPP4R1LQ9P1A2 415 aa9.3□□□□□ -0.92
APOBEC3F-201ENST00000308521 MTFP1Q9UDX5 166 aa9.3□□□□□ -0.92
APOBEC3F-201ENST00000308521 MRTO4Q9UKD2 239 aaKnown RBP9.3□□□□□ -0.92
APOBEC3F-201ENST00000308521 IER3IP1Q9Y5U9 82 aa9.3□□□□□ -0.92
APOBEC3F-201ENST00000308521 DMXL1Q9Y485 3027 aa9.3□□□□□ -0.92
APOBEC3F-201ENST00000308521 IGHV3-20A0A0C4DH32 117 aa9.3□□□□□ -0.92
APOBEC3F-201ENST00000308521 CDC14CA4D256 554 aa9.3□□□□□ -0.92
APOBEC3F-201ENST00000308521 XRCC3O43542 346 aa9.3□□□□□ -0.92
APOBEC3F-201ENST00000308521 RBBP9O75884 186 aa9.3□□□□□ -0.92
APOBEC3F-201ENST00000308521 NGFRP08138 427 aa9.3□□□□□ -0.92
APOBEC3F-201ENST00000308521 CSF1P09603 554 aa9.3□□□□□ -0.92
APOBEC3F-201ENST00000308521 MPGP29372 298 aa9.3□□□□□ -0.92
APOBEC3F-201ENST00000308521 H2BFSP57053 126 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms