RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 NIPAL3Q6P499 406 aa9.89□□□□□ -0.83
LSM3-201ENST00000306024 MOB3CQ70IA8 216 aa9.89□□□□□ -0.83
LSM3-201ENST00000306024 PRSS41Q7RTY9 318 aa9.89□□□□□ -0.83
LSM3-201ENST00000306024 BMP8AQ7Z5Y6 402 aa9.89□□□□□ -0.83
LSM3-201ENST00000306024 RANBP3LQ86VV4 465 aaPredicted RBP9.89□□□□□ -0.83
LSM3-201ENST00000306024 COX18Q8N8Q8 333 aa9.89□□□□□ -0.83
LSM3-201ENST00000306024 NUP43Q8NFH3 380 aa9.89□□□□□ -0.83
LSM3-201ENST00000306024 ELOA3Q8NG57 546 aa9.89□□□□□ -0.83
LSM3-201ENST00000306024 WFDC6Q9BQY6 131 aa9.89□□□□□ -0.83
LSM3-201ENST00000306024 MRPS2Q9Y399 296 aaKnown RBP9.89□□□□□ -0.83
LSM3-201ENST00000306024 CBY1Q9Y3M2 126 aa9.89□□□□□ -0.83
LSM3-201ENST00000306024 hCG_1809904A0A1W2PP81 198 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 A0A1W2PR64 198 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 A0A1W2PRV1 198 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 ANKRD20A5PA0PJZ0 165 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 SERTM1A2A2V5 107 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 OR6C76A6NM76 312 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 ZNF749O43361 778 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 GALR2O43603 387 aaPredicted RBP9.88□□□□□ -0.83
LSM3-201ENST00000306024 SCRG1O75711 98 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 PMS2P2O95744 297 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 TXNDC12O95881 172 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 MT-ND4LP03901 98 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 SFTA3P0C7M3 94 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 MC3RP41968 323 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 S100A10P60903 97 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 ACTA2P62736 377 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 ACTG2P63267 376 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 ZNF616Q08AN1 781 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 C2orf68Q2NKX9 166 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 GFOD2Q3B7J2 385 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 SLC23A3Q6PIS1 610 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 UCK1Q9HA47 277 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 CALML5Q9NZT1 146 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 SLC7A7Q9UM01 511 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 NTNG1Q9Y2I2 539 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 A0A1B0GV50 99 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 IFITM5A6NNB3 132 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 TCAPO15273 167 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 TNFSF14O43557 240 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 FBXO24O75426 580 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 SBK2P0C263 348 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 AKR1C4P17516 323 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 MPGP29372 298 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 FXYD6P3P58550 94 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 SIRPAP78324 504 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 ACSM1Q08AH1 577 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 ELAVL1Q15717 326 aaKnown RBP9.88□□□□□ -0.83
LSM3-201ENST00000306024 NSDHLQ15738 373 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 MICBQ29980 383 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 AKR1C8PQ5T2L2 129 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 STEAP1BQ6NZ63 245 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 BAP18Q8IXM2 172 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 KCNRGQ8N5I3 272 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 CHST4Q8NCG5 386 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 CCDC74BQ96LY2 380 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 TSPAN10Q9H1Z9 355 aaPredicted RBP9.88□□□□□ -0.83
LSM3-201ENST00000306024 GPR27Q9NS67 375 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 DMRT1Q9Y5R6 373 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 RP1L1Q8IWN7 2480 aaPredicted RBP9.88□□□□□ -0.83
LSM3-201ENST00000306024 M0QYG6 137 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 CTDSPLO15194 276 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 EMC8O43402 210 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 PLPP2O43688 288 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 PPP1R3DO95685 299 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 GPR75O95800 540 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 IGHA1P01876 353 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 SERPINA5P05154 406 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 NR2C1P13056 603 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 ACTBP60709 375 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 ACTG1P63261 375 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 PJVKQ0ZLH3 352 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 RUNX2Q13950 521 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 C11orf87Q6NUJ2 197 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 SLC48A1Q6P1K1 146 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 CD300LDQ6UXZ3 194 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 ZNF620Q6ZNG0 422 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 C15orf54Q8N8G6 183 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 NT5CQ8TCD5 201 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 GRHL3Q8TE85 626 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 TMEM255BQ8WV15 326 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 LOXL4Q96JB6 756 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 HS6ST2Q96MM7 605 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 TEAD3Q99594 435 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 JAM3Q9BX67 310 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 SEC11CQ9BY50 192 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 GAR1Q9NY12 217 aaKnown RBP9.88□□□□□ -0.83
LSM3-201ENST00000306024 GSKIPQ9P0R6 139 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 PISDQ9UG56 409 aa9.88□□□□□ -0.83
LSM3-201ENST00000306024 ZNF230Q9UIE0 474 aaPredicted RBP9.88□□□□□ -0.83
LSM3-201ENST00000306024 EXOGQ9Y2C4 368 aaKnown RBP9.88□□□□□ -0.83
LSM3-201ENST00000306024 FANCMQ8IYD8 2048 aa9.87□□□□□ -0.83
LSM3-201ENST00000306024 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.87□□□□□ -0.83
LSM3-201ENST00000306024 DUXAA6NLW8 204 aa9.87□□□□□ -0.83
LSM3-201ENST00000306024 TSPAN15O95858 294 aa9.87□□□□□ -0.83
LSM3-201ENST00000306024 OR4E1P0C645 316 aa9.87□□□□□ -0.83
LSM3-201ENST00000306024 CD53P19397 219 aa9.87□□□□□ -0.83
LSM3-201ENST00000306024 LAP3P28838 519 aa9.87□□□□□ -0.83
LSM3-201ENST00000306024 CD1CP29017 333 aa9.87□□□□□ -0.83
LSM3-201ENST00000306024 RAB38P57729 211 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms