RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 GLCEO94923 617 aa13.63□□□□□ -0.23
SCN3B-201ENST00000299333 NXPH2O95156 264 aa13.63□□□□□ -0.23
SCN3B-201ENST00000299333 OR4E1P0C645 316 aa13.63□□□□□ -0.23
SCN3B-201ENST00000299333 PI3P19957 117 aa13.63□□□□□ -0.23
SCN3B-201ENST00000299333 FOLR3P41439 243 aa13.63□□□□□ -0.23
SCN3B-201ENST00000299333 RUNX3Q13761 415 aa13.63□□□□□ -0.23
SCN3B-201ENST00000299333 ZNF718Q3SXZ3 478 aa13.63□□□□□ -0.23
SCN3B-201ENST00000299333 ADGRG7Q96K78 797 aa13.63□□□□□ -0.23
SCN3B-201ENST00000299333 CAPNS2Q96L46 248 aa13.63□□□□□ -0.23
SCN3B-201ENST00000299333 LRIT1Q9P2V4 623 aa13.63□□□□□ -0.23
SCN3B-201ENST00000299333 KCNG2Q9UJ96 466 aa13.63□□□□□ -0.23
SCN3B-201ENST00000299333 B4E171 279 aa13.63□□□□□ -0.23
SCN3B-201ENST00000299333 M0QZK8 103 aa13.63□□□□□ -0.23
SCN3B-201ENST00000299333 PTGESO14684 152 aa13.63□□□□□ -0.23
SCN3B-201ENST00000299333 GALR3O60755 368 aaPredicted RBP13.63□□□□□ -0.23
SCN3B-201ENST00000299333 GGCTO75223 188 aaKnown RBP13.63□□□□□ -0.23
SCN3B-201ENST00000299333 PMCHP20382 165 aa13.63□□□□□ -0.23
SCN3B-201ENST00000299333 TIGITQ495A1 244 aa13.63□□□□□ -0.23
SCN3B-201ENST00000299333 RBM45Q8IUH3 476 aaKnown RBP13.63□□□□□ -0.23
SCN3B-201ENST00000299333 NMES1Q9C002 83 aa13.63□□□□□ -0.23
SCN3B-201ENST00000299333 GPR173Q9NS66 373 aa13.63□□□□□ -0.23
SCN3B-201ENST00000299333 H0YIV9 168 aa13.63□□□□□ -0.23
SCN3B-201ENST00000299333 ADRA1AP35348 466 aa13.63□□□□□ -0.23
SCN3B-201ENST00000299333 RGRP47804 291 aa13.63□□□□□ -0.23
SCN3B-201ENST00000299333 OR5I1Q13606 314 aa13.63□□□□□ -0.23
SCN3B-201ENST00000299333 VHLLQ6RSH7 139 aa13.63□□□□□ -0.23
SCN3B-201ENST00000299333 OR2AK2Q8NG84 335 aa13.63□□□□□ -0.23
SCN3B-201ENST00000299333 LKAAEAR1Q8TD35 194 aa13.63□□□□□ -0.23
SCN3B-201ENST00000299333 UCN3Q969E3 161 aa13.63□□□□□ -0.23
SCN3B-201ENST00000299333 WDR89Q96FK6 387 aaPredicted RBP13.63□□□□□ -0.23
SCN3B-201ENST00000299333 DTD2Q96FN9 168 aa13.63□□□□□ -0.23
SCN3B-201ENST00000299333 PBX4Q9BYU1 374 aa13.63□□□□□ -0.23
SCN3B-201ENST00000299333 LINC00597Q9H2U6 94 aa13.63□□□□□ -0.23
SCN3B-201ENST00000299333 OR1A1Q9P1Q5 309 aa13.63□□□□□ -0.23
SCN3B-201ENST00000299333 COL1A1P02452 1464 aaPredicted RBP13.63□□□□□ -0.23
SCN3B-201ENST00000299333 TRAV36DV7A0A075B6V5 113 aa13.63□□□□□ -0.23
SCN3B-201ENST00000299333 LOC102723971A0A1B0GUV8 181 aa13.63□□□□□ -0.23
SCN3B-201ENST00000299333 CNMDO75829 334 aa13.63□□□□□ -0.23
SCN3B-201ENST00000299333 GLSO94925 669 aaPredicted RBP13.63□□□□□ -0.23
SCN3B-201ENST00000299333 CHRM2P08172 466 aa13.63□□□□□ -0.23
SCN3B-201ENST00000299333 ATXN1LP0C7T5 689 aaKnown RBP13.63□□□□□ -0.23
SCN3B-201ENST00000299333 PRLHRP49683 370 aa13.63□□□□□ -0.23
SCN3B-201ENST00000299333 TEAD3Q99594 435 aa13.63□□□□□ -0.23
SCN3B-201ENST00000299333 KCPQ6ZWJ8 1503 aa13.63□□□□□ -0.23
SCN3B-201ENST00000299333 MYH7P12883 1935 aa13.62□□□□□ -0.23
SCN3B-201ENST00000299333 ZNF813Q6ZN06 617 aa13.62□□□□□ -0.23
SCN3B-201ENST00000299333 CPEB1Q9BZB8 566 aaKnown RBP13.62□□□□□ -0.23
SCN3B-201ENST00000299333 ZNF385DQ9H6B1 395 aa13.62□□□□□ -0.23
SCN3B-201ENST00000299333 UCK1Q9HA47 277 aa13.62□□□□□ -0.23
SCN3B-201ENST00000299333 SLC45A1Q9Y2W3 748 aa13.62□□□□□ -0.23
SCN3B-201ENST00000299333 PTRH2Q9Y3E5 179 aaKnown RBP13.62□□□□□ -0.23
SCN3B-201ENST00000299333 TMX2-CTNND1H3BSU7 103 aa13.62□□□□□ -0.23
SCN3B-201ENST00000299333 SDCBPO00560 298 aaPredicted RBP13.62□□□□□ -0.23
SCN3B-201ENST00000299333 RGS11O94810 467 aa13.62□□□□□ -0.23
SCN3B-201ENST00000299333 ARRB2P32121 409 aa13.62□□□□□ -0.23
SCN3B-201ENST00000299333 SLC6A11P48066 632 aa13.62□□□□□ -0.23
SCN3B-201ENST00000299333 IHHQ14623 411 aa13.62□□□□□ -0.23
SCN3B-201ENST00000299333 DEFB133Q30KQ1 61 aa13.62□□□□□ -0.23
SCN3B-201ENST00000299333 Q6ZN92 141 aa13.62□□□□□ -0.23
SCN3B-201ENST00000299333 SYT13Q7L8C5 426 aa13.62□□□□□ -0.23
SCN3B-201ENST00000299333 CMTM4Q8IZR5 234 aa13.62□□□□□ -0.23
SCN3B-201ENST00000299333 TCTEX1D1Q8N7M0 179 aa13.62□□□□□ -0.23
SCN3B-201ENST00000299333 NUDT8Q8WV74 236 aa13.62□□□□□ -0.23
SCN3B-201ENST00000299333 AUNIPQ9H7T9 357 aa13.62□□□□□ -0.23
SCN3B-201ENST00000299333 A0A1B0GUH1 482 aa13.62□□□□□ -0.23
SCN3B-201ENST00000299333 BCL2L11O43521 198 aa13.62□□□□□ -0.23
SCN3B-201ENST00000299333 TIMM8AO60220 97 aaPredicted RBP13.62□□□□□ -0.23
SCN3B-201ENST00000299333 STAG3L2P0CL84 134 aa13.62□□□□□ -0.23
SCN3B-201ENST00000299333 OR10J5Q8NHC4 309 aa13.62□□□□□ -0.23
SCN3B-201ENST00000299333 NEURL3Q96EH8 262 aa13.62□□□□□ -0.23
SCN3B-201ENST00000299333 ACTR3CQ9C0K3 210 aaPredicted RBP13.62□□□□□ -0.23
SCN3B-201ENST00000299333 ZNF732B4DXR9 585 aa13.62□□□□□ -0.23
SCN3B-201ENST00000299333 SOD1P00441 154 aa13.62□□□□□ -0.23
SCN3B-201ENST00000299333 DEFA4P12838 97 aa13.62□□□□□ -0.23
SCN3B-201ENST00000299333 EVX1P49640 407 aa13.62□□□□□ -0.23
SCN3B-201ENST00000299333 EDDM3BP56851 147 aa13.62□□□□□ -0.23
SCN3B-201ENST00000299333 SLC35D3Q5M8T2 416 aa13.62□□□□□ -0.23
SCN3B-201ENST00000299333 ZNF468Q5VIY5 522 aaPredicted RBP13.62□□□□□ -0.23
SCN3B-201ENST00000299333 SHARPINQ9H0F6 387 aa13.62□□□□□ -0.23
SCN3B-201ENST00000299333 LRRC37A3O60309 1634 aa13.62□□□□□ -0.23
SCN3B-201ENST00000299333 SIGLEC1Q9BZZ2 1709 aa13.62□□□□□ -0.23
SCN3B-201ENST00000299333 BLACEA4D250 179 aa13.62□□□□□ -0.23
SCN3B-201ENST00000299333 GPR171O14626 319 aa13.62□□□□□ -0.23
SCN3B-201ENST00000299333 CT45A10P0DMU9 189 aa13.62□□□□□ -0.23
SCN3B-201ENST00000299333 HIST1H3AP68431 136 aa13.62□□□□□ -0.23
SCN3B-201ENST00000299333 ZNF85Q03923 595 aa13.62□□□□□ -0.23
SCN3B-201ENST00000299333 ANKRD34AQ69YU3 496 aa13.62□□□□□ -0.23
SCN3B-201ENST00000299333 SEMA6CQ9H3T2 930 aa13.62□□□□□ -0.23
SCN3B-201ENST00000299333 NDRG4Q9ULP0 352 aaKnown RBP13.62□□□□□ -0.23
SCN3B-201ENST00000299333 NENFQ9UMX5 172 aa13.62□□□□□ -0.23
SCN3B-201ENST00000299333 TMED7-TICAM2A0A0A6YYA0 188 aa13.61□□□□□ -0.23
SCN3B-201ENST00000299333 DRGXA6NNA5 263 aa13.61□□□□□ -0.23
SCN3B-201ENST00000299333 NDUFS8O00217 210 aa13.61□□□□□ -0.23
SCN3B-201ENST00000299333 TBPP20226 339 aa13.61□□□□□ -0.23
SCN3B-201ENST00000299333 ZNF750Q32MQ0 723 aa13.61□□□□□ -0.23
SCN3B-201ENST00000299333 MAJINQ3KP22 176 aa13.61□□□□□ -0.23
SCN3B-201ENST00000299333 Q6ZSR6 202 aa13.61□□□□□ -0.23
SCN3B-201ENST00000299333 WDR83Q9BRX9 315 aaKnown RBP13.61□□□□□ -0.23
SCN3B-201ENST00000299333 TMED7Q9Y3B3 224 aa13.61□□□□□ -0.23
SCN3B-201ENST00000299333 RNASEK-C17orf49H0YIS7 233 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms