RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 DTD2Q96FN9 168 aa10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 SEMA6CQ9H3T2 930 aa10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 TMEM184AQ6ZMB5 413 aa10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 SLC35G3Q8N808 338 aa10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 OR5K2Q8NHB8 316 aa10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 ZCCHC14Q8WYQ9 949 aaKnown RBP10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 HSF4Q9ULV5 492 aa10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 ZGRF1Q86YA3 2104 aa10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 ARNTLO00327 626 aa10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 PRSS36Q5K4E3 855 aa10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 GLIPR1L1Q6UWM5 242 aa10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 OR2M7Q8NG81 312 aa10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 GPR32P1Q8NGA4 272 aa10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 GNPNAT1Q96EK6 184 aaPredicted RBP10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 AMDHD1Q96NU7 426 aa10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 PADI3Q9ULW8 664 aa10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 SNRPGP15A8MWD9 76 aa10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 FCN1O00602 326 aa10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 CT45A10P0DMU9 189 aa10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 GPM6AP51674 278 aa10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 LEMD1Q68G75 181 aa10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 NANOGP1Q8N7R0 232 aa10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 RAB18Q9NP72 206 aa10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 HRASLS2Q9NWW9 162 aa10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 SMCHD1A6NHR9 2005 aa10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 A0A1B0GV72 72 aa10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 TMEM218A2RU14 115 aa10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 CRYABP02511 175 aaKnown RBP10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 TCTAP57738 103 aa10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 NUDCD2Q8WVJ2 157 aa10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 FOXJ1Q92949 421 aa10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 DDA1Q9BW61 102 aa10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 BARX1Q9HBU1 254 aaPredicted RBP10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 ST3GAL2Q16842 350 aa10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 DUSP18Q8NEJ0 188 aa10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 OR2A1Q8NGT9 310 aa10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 ADGRG7Q96K78 797 aa10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 FAAP24Q9BTP7 215 aa10.82□□□□□ -0.68
SHROOM3-201ENST00000296043 PCNX2A6NKB5 2137 aa10.81□□□□□ -0.68
SHROOM3-201ENST00000296043 E5RGE8 158 aa10.81□□□□□ -0.68
SHROOM3-201ENST00000296043 K7EQM0 130 aa10.81□□□□□ -0.68
SHROOM3-201ENST00000296043 DDNO94850 711 aaPredicted RBP10.81□□□□□ -0.68
SHROOM3-201ENST00000296043 KIAA0319Q5VV43 1072 aa10.81□□□□□ -0.68
SHROOM3-201ENST00000296043 TMEM65Q6PI78 240 aa10.81□□□□□ -0.68
SHROOM3-201ENST00000296043 MBOAT2Q6ZWT7 520 aa10.81□□□□□ -0.68
SHROOM3-201ENST00000296043 DTWD2Q8NBA8 298 aa10.81□□□□□ -0.68
SHROOM3-201ENST00000296043 ZNF738Q8NE65 137 aa10.81□□□□□ -0.68
SHROOM3-201ENST00000296043 ISL2Q96A47 359 aa10.81□□□□□ -0.68
SHROOM3-201ENST00000296043 RCL1Q9Y2P8 373 aaKnown RBP10.81□□□□□ -0.68
SHROOM3-201ENST00000296043 NSG2Q9Y328 171 aa10.81□□□□□ -0.68
SHROOM3-201ENST00000296043 DACT2Q5SW24 774 aa10.81□□□□□ -0.68
SHROOM3-201ENST00000296043 ZNF487B1APH4 448 aa10.81□□□□□ -0.68
SHROOM3-201ENST00000296043 ADAMTS4O75173 837 aa10.81□□□□□ -0.68
SHROOM3-201ENST00000296043 OPALINQ96PE5 141 aa10.81□□□□□ -0.68
SHROOM3-201ENST00000296043 DBX1A6NMT0 343 aa10.81□□□□□ -0.68
SHROOM3-201ENST00000296043 DDTP30046 118 aa10.81□□□□□ -0.68
SHROOM3-201ENST00000296043 SLC6A11P48066 632 aa10.81□□□□□ -0.68
SHROOM3-201ENST00000296043 CDC34P49427 236 aaPredicted RBP10.81□□□□□ -0.68
SHROOM3-201ENST00000296043 FGF8P55075 233 aaPredicted RBP10.81□□□□□ -0.68
SHROOM3-201ENST00000296043 ISL1P61371 349 aa10.81□□□□□ -0.68
SHROOM3-201ENST00000296043 SKP2Q13309 424 aa10.81□□□□□ -0.68
SHROOM3-201ENST00000296043 SPANXN5Q5MJ07 72 aa10.81□□□□□ -0.68
SHROOM3-201ENST00000296043 LYG2Q86SG7 212 aa10.81□□□□□ -0.68
SHROOM3-201ENST00000296043 SLC38A5Q8WUX1 472 aa10.81□□□□□ -0.68
SHROOM3-201ENST00000296043 SLCO4A1Q96BD0 722 aa10.81□□□□□ -0.68
SHROOM3-201ENST00000296043 RHNO1Q9BSD3 238 aa10.81□□□□□ -0.68
SHROOM3-201ENST00000296043 RNF39Q9H2S5 420 aa10.81□□□□□ -0.68
SHROOM3-201ENST00000296043 FBXO34Q9NWN3 711 aa10.81□□□□□ -0.68
SHROOM3-201ENST00000296043 C19orf25Q9UFG5 118 aaPredicted RBP10.81□□□□□ -0.68
SHROOM3-201ENST00000296043 TECPR2O15040 1411 aa10.81□□□□□ -0.68
SHROOM3-201ENST00000296043 GLTPD2A6NH11 291 aa10.81□□□□□ -0.68
SHROOM3-201ENST00000296043 SUCLG1P53597 346 aaKnown RBP10.81□□□□□ -0.68
SHROOM3-201ENST00000296043 ZNF252P-AS1Q0IIN9 211 aa10.81□□□□□ -0.68
SHROOM3-201ENST00000296043 ATP5SQ99766 215 aa10.81□□□□□ -0.68
SHROOM3-201ENST00000296043 MED17Q9NVC6 651 aa10.81□□□□□ -0.68
SHROOM3-201ENST00000296043 VSTM5A8MXK1 200 aa10.81□□□□□ -0.68
SHROOM3-201ENST00000296043 PMP22Q01453 160 aa10.81□□□□□ -0.68
SHROOM3-201ENST00000296043 TMEM99Q8N816 258 aa10.81□□□□□ -0.68
SHROOM3-201ENST00000296043 ACVR1CQ8NER5 493 aa10.81□□□□□ -0.68
SHROOM3-201ENST00000296043 SLC39A7Q92504 469 aa10.81□□□□□ -0.68
SHROOM3-201ENST00000296043 CIB3Q96Q77 187 aaPredicted RBP10.81□□□□□ -0.68
SHROOM3-201ENST00000296043 OR2A14Q96R47 310 aa10.81□□□□□ -0.68
SHROOM3-201ENST00000296043 PISDQ9UG56 409 aa10.81□□□□□ -0.68
SHROOM3-201ENST00000296043 OR5AL1P0C617 328 aa10.81□□□□□ -0.68
SHROOM3-201ENST00000296043 ELOBQ15370 118 aa10.81□□□□□ -0.68
SHROOM3-201ENST00000296043 NHLRC1Q6VVB1 395 aa10.81□□□□□ -0.68
SHROOM3-201ENST00000296043 SLC24A5Q71RS6 500 aa10.81□□□□□ -0.68
SHROOM3-201ENST00000296043 TRILQ7L0X0 811 aa10.81□□□□□ -0.68
SHROOM3-201ENST00000296043 SLC22A24Q8N4F4 322 aa10.81□□□□□ -0.68
SHROOM3-201ENST00000296043 IGSF8Q969P0 613 aa10.81□□□□□ -0.68
SHROOM3-201ENST00000296043 FGGYQ96C11 551 aa10.81□□□□□ -0.68
SHROOM3-201ENST00000296043 UBXN10Q96LJ8 280 aa10.81□□□□□ -0.68
SHROOM3-201ENST00000296043 FBXL12Q9NXK8 326 aa10.81□□□□□ -0.68
SHROOM3-201ENST00000296043 CDK2AP1O14519 115 aa10.81□□□□□ -0.68
SHROOM3-201ENST00000296043 CXCL11O14625 94 aa10.81□□□□□ -0.68
SHROOM3-201ENST00000296043 ZNF93P35789 620 aaPredicted RBP10.81□□□□□ -0.68
SHROOM3-201ENST00000296043 OR52N1Q8NH53 320 aa10.81□□□□□ -0.68
SHROOM3-201ENST00000296043 COMPP49747 757 aaPredicted RBP10.8□□□□□ -0.68
SHROOM3-201ENST00000296043 TSPAN31Q12999 210 aa10.8□□□□□ -0.68
SHROOM3-201ENST00000296043 LTB4RQ15722 352 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms