RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 SECTM1Q8WVN6 248 aa16.06■□□□□ 0.16
CDC42EP3-201ENST00000295324 ARSGQ96EG1 525 aa16.06■□□□□ 0.16
CDC42EP3-201ENST00000295324 LOC100289279A0A1B0GTE1 492 aa16.06■□□□□ 0.16
CDC42EP3-201ENST00000295324 SSX4O60224 188 aa16.06■□□□□ 0.16
CDC42EP3-201ENST00000295324 TFP02787 698 aa16.06■□□□□ 0.16
CDC42EP3-201ENST00000295324 CAV3P56539 151 aa16.06■□□□□ 0.16
CDC42EP3-201ENST00000295324 ZNF425Q6IV72 752 aa16.06■□□□□ 0.16
CDC42EP3-201ENST00000295324 D2HGDHQ8N465 521 aa16.06■□□□□ 0.16
CDC42EP3-201ENST00000295324 DRAXINQ8NBI3 349 aaPredicted RBP16.06■□□□□ 0.16
CDC42EP3-201ENST00000295324 TAAR8Q969N4 342 aa16.06■□□□□ 0.16
CDC42EP3-201ENST00000295324 OR5M11Q96RB7 305 aa16.06■□□□□ 0.16
CDC42EP3-201ENST00000295324 FAM60AQ9NP50 221 aa16.06■□□□□ 0.16
CDC42EP3-201ENST00000295324 QPCTLQ9NXS2 382 aa16.06■□□□□ 0.16
CDC42EP3-201ENST00000295324 SHROOM3Q8TF72 1996 aa16.06■□□□□ 0.16
CDC42EP3-201ENST00000295324 ACSM5Q6NUN0 579 aa16.06■□□□□ 0.16
CDC42EP3-201ENST00000295324 FAM198BQ6UWH4 519 aa16.06■□□□□ 0.16
CDC42EP3-201ENST00000295324 TCFL5Q9UL49 500 aa16.06■□□□□ 0.16
CDC42EP3-201ENST00000295324 RAF1P04049 648 aa16.06■□□□□ 0.16
CDC42EP3-201ENST00000295324 SRMP19623 302 aa16.06■□□□□ 0.16
CDC42EP3-201ENST00000295324 NFYBP25208 207 aa16.06■□□□□ 0.16
CDC42EP3-201ENST00000295324 CORO6Q6QEF8 472 aa16.06■□□□□ 0.16
CDC42EP3-201ENST00000295324 USP51Q70EK9 711 aa16.06■□□□□ 0.16
CDC42EP3-201ENST00000295324 SLC25A31Q9H0C2 315 aa16.06■□□□□ 0.16
CDC42EP3-201ENST00000295324 GPR173Q9NS66 373 aa16.06■□□□□ 0.16
CDC42EP3-201ENST00000295324 OCIAD1Q9NX40 245 aa16.06■□□□□ 0.16
CDC42EP3-201ENST00000295324 A0A087WUJ7 227 aa16.06■□□□□ 0.16
CDC42EP3-201ENST00000295324 HPP00738 406 aa16.06■□□□□ 0.16
CDC42EP3-201ENST00000295324 PIPP12273 146 aaPredicted RBP16.06■□□□□ 0.16
CDC42EP3-201ENST00000295324 PRSS41Q7RTY9 318 aa16.06■□□□□ 0.16
CDC42EP3-201ENST00000295324 ZNF679Q8IYX0 411 aa16.06■□□□□ 0.16
CDC42EP3-201ENST00000295324 PLPP7Q8NBV4 271 aa16.06■□□□□ 0.16
CDC42EP3-201ENST00000295324 OR51E1Q8TCB6 317 aa16.06■□□□□ 0.16
CDC42EP3-201ENST00000295324 CTDSP2O14595 271 aa16.05■□□□□ 0.16
CDC42EP3-201ENST00000295324 GIFP27352 417 aa16.05■□□□□ 0.16
CDC42EP3-201ENST00000295324 AGFG1P52594 562 aaKnown RBP16.05■□□□□ 0.16
CDC42EP3-201ENST00000295324 COMMD7Q86VX2 200 aa16.05■□□□□ 0.16
CDC42EP3-201ENST00000295324 OR51D1Q8NGF3 324 aa16.05■□□□□ 0.16
CDC42EP3-201ENST00000295324 ST7LQ8TDW4 575 aa16.05■□□□□ 0.16
CDC42EP3-201ENST00000295324 SULT4A1Q9BR01 284 aa16.05■□□□□ 0.16
CDC42EP3-201ENST00000295324 ZNF71Q9NQZ8 489 aaPredicted RBP16.05■□□□□ 0.16
CDC42EP3-201ENST00000295324 GFOD1Q9NXC2 390 aa16.05■□□□□ 0.16
CDC42EP3-201ENST00000295324 TRIP12Q14669 1992 aaPredicted RBP16.05■□□□□ 0.16
CDC42EP3-201ENST00000295324 SLC22A23A1A5C7 686 aa16.05■□□□□ 0.16
CDC42EP3-201ENST00000295324 ARRDC5A6NEK1 342 aa16.05■□□□□ 0.16
CDC42EP3-201ENST00000295324 HSPB2A8KAH6 182 aa16.05■□□□□ 0.16
CDC42EP3-201ENST00000295324 IFNA10P01566 189 aa16.05■□□□□ 0.16
CDC42EP3-201ENST00000295324 LIPCP11150 499 aa16.05■□□□□ 0.16
CDC42EP3-201ENST00000295324 PPP1CAP62136 330 aa16.05■□□□□ 0.16
CDC42EP3-201ENST00000295324 HSPB2Q16082 182 aa16.05■□□□□ 0.16
CDC42EP3-201ENST00000295324 KIRREL1Q96J84 757 aa16.05■□□□□ 0.16
CDC42EP3-201ENST00000295324 LRRC37AA6NMS7 1700 aa16.05■□□□□ 0.16
CDC42EP3-201ENST00000295324 SOD1P00441 154 aa16.05■□□□□ 0.16
CDC42EP3-201ENST00000295324 MT-ND4P03905 459 aa16.05■□□□□ 0.16
CDC42EP3-201ENST00000295324 CCL4P13236 92 aa16.05■□□□□ 0.16
CDC42EP3-201ENST00000295324 ALDH3B2P48448 385 aa16.05■□□□□ 0.16
CDC42EP3-201ENST00000295324 DLX5P56178 289 aa16.05■□□□□ 0.16
CDC42EP3-201ENST00000295324 CEACAM16Q2WEN9 425 aa16.05■□□□□ 0.16
CDC42EP3-201ENST00000295324 ZNF573Q86YE8 665 aa16.05■□□□□ 0.16
CDC42EP3-201ENST00000295324 OR51J1Q9H342 316 aa16.05■□□□□ 0.16
CDC42EP3-201ENST00000295324 PCOLCE2Q9UKZ9 415 aa16.05■□□□□ 0.16
CDC42EP3-201ENST00000295324 PLXNB2O15031 1838 aa16.05■□□□□ 0.16
CDC42EP3-201ENST00000295324 KIR2DS1A0A191URI9 304 aa16.05■□□□□ 0.16
CDC42EP3-201ENST00000295324 IFNA4P05014 189 aa16.05■□□□□ 0.16
CDC42EP3-201ENST00000295324 B4GALT1P15291 398 aa16.05■□□□□ 0.16
CDC42EP3-201ENST00000295324 KIR2DS4P43632 304 aa16.05■□□□□ 0.16
CDC42EP3-201ENST00000295324 SRPXP78539 464 aa16.05■□□□□ 0.16
CDC42EP3-201ENST00000295324 KIR2DS1Q14954 304 aa16.05■□□□□ 0.16
CDC42EP3-201ENST00000295324 APOOLQ6UXV4 268 aa16.05■□□□□ 0.16
CDC42EP3-201ENST00000295324 RNF165Q6ZSG1 346 aa16.05■□□□□ 0.16
CDC42EP3-201ENST00000295324 RPL3LQ92901 407 aaKnown RBP16.05■□□□□ 0.16
CDC42EP3-201ENST00000295324 OPALINQ96PE5 141 aa16.05■□□□□ 0.16
CDC42EP3-201ENST00000295324 PDCD1LG2Q9BQ51 273 aa16.05■□□□□ 0.16
CDC42EP3-201ENST00000295324 GABARAPL1Q9H0R8 117 aa16.05■□□□□ 0.16
CDC42EP3-201ENST00000295324 ZNF768Q9H5H4 540 aaKnown RBP16.05■□□□□ 0.16
CDC42EP3-201ENST00000295324 TMEM100Q9NV29 134 aa16.05■□□□□ 0.16
CDC42EP3-201ENST00000295324 FAM157BP0CG42 384 aa16.04■□□□□ 0.16
CDC42EP3-201ENST00000295324 PTAFRP25105 342 aa16.04■□□□□ 0.16
CDC42EP3-201ENST00000295324 LSRQ86X29 649 aaPredicted RBP16.04■□□□□ 0.16
CDC42EP3-201ENST00000295324 GNRHR2Q96P88 292 aa16.04■□□□□ 0.16
CDC42EP3-201ENST00000295324 SLC25A19Q9HC21 320 aa16.04■□□□□ 0.16
CDC42EP3-201ENST00000295324 HLA-AP01891 365 aaKnown RBP16.04■□□□□ 0.16
CDC42EP3-201ENST00000295324 EGR3Q06889 387 aa16.04■□□□□ 0.16
CDC42EP3-201ENST00000295324 ANKRD16Q6P6B7 361 aa16.04■□□□□ 0.16
CDC42EP3-201ENST00000295324 CA5BP1Q8WTZ4 195 aa16.04■□□□□ 0.16
CDC42EP3-201ENST00000295324 ACOXLQ9NUZ1 547 aa16.04■□□□□ 0.16
CDC42EP3-201ENST00000295324 CEPT1Q9Y6K0 416 aa16.04■□□□□ 0.16
CDC42EP3-201ENST00000295324 SERTM1A2A2V5 107 aa16.04■□□□□ 0.16
CDC42EP3-201ENST00000295324 UBL3O95164 117 aa16.04■□□□□ 0.16
CDC42EP3-201ENST00000295324 NR4A2P43354 598 aa16.04■□□□□ 0.16
CDC42EP3-201ENST00000295324 DPPA2Q7Z7J5 298 aa16.04■□□□□ 0.16
CDC42EP3-201ENST00000295324 BCL2A1Q16548 175 aa16.04■□□□□ 0.16
CDC42EP3-201ENST00000295324 TRILQ7L0X0 811 aa16.04■□□□□ 0.16
CDC42EP3-201ENST00000295324 ZAR1LA6NP61 321 aa16.03■□□□□ 0.16
CDC42EP3-201ENST00000295324 HOXB5P09067 269 aa16.03■□□□□ 0.16
CDC42EP3-201ENST00000295324 UCNP55089 124 aa16.03■□□□□ 0.16
CDC42EP3-201ENST00000295324 M1APQ8TC57 530 aa16.03■□□□□ 0.16
CDC42EP3-201ENST00000295324 PRICKLE4Q2TBC4 344 aa16.03■□□□□ 0.16
CDC42EP3-201ENST00000295324 GPR155Q7Z3F1 870 aa16.03■□□□□ 0.16
CDC42EP3-201ENST00000295324 SYS1Q8N2H4 156 aa16.03■□□□□ 0.16
CDC42EP3-201ENST00000295324 GTPBP8Q8N3Z3 284 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms