RNA–Protein interactions for RNA: ENST00000292510.5

VPS28-201, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-201ENST00000292510 TEKQ02763 1124 aa11.52□□□□□ -0.57
VPS28-201ENST00000292510 GLO1Q04760 184 aa11.52□□□□□ -0.57
VPS28-201ENST00000292510 SCRN3Q0VDG4 424 aa11.52□□□□□ -0.57
VPS28-201ENST00000292510 AQP6Q13520 282 aa11.52□□□□□ -0.57
VPS28-201ENST00000292510 KCNMB1Q16558 191 aa11.52□□□□□ -0.57
VPS28-201ENST00000292510 SWI5Q1ZZU3 235 aa11.52□□□□□ -0.57
VPS28-201ENST00000292510 CCDC92Q53HC0 331 aaPredicted RBP11.52□□□□□ -0.57
VPS28-201ENST00000292510 Q5PR19 223 aa11.52□□□□□ -0.57
VPS28-201ENST00000292510 CORO6Q6QEF8 472 aa11.52□□□□□ -0.57
VPS28-201ENST00000292510 SPNS3Q6ZMD2 512 aa11.52□□□□□ -0.57
VPS28-201ENST00000292510 SYT9Q86SS6 491 aa11.52□□□□□ -0.57
VPS28-201ENST00000292510 LINC00346Q8IVM7 164 aa11.52□□□□□ -0.57
VPS28-201ENST00000292510 ALDH16A1Q8IZ83 802 aa11.52□□□□□ -0.57
VPS28-201ENST00000292510 OR10H5Q8NGA6 315 aa11.52□□□□□ -0.57
VPS28-201ENST00000292510 OR1J2Q8NGS2 313 aa11.52□□□□□ -0.57
VPS28-201ENST00000292510 OR2T4Q8NH00 348 aa11.52□□□□□ -0.57
VPS28-201ENST00000292510 CENPNQ96H22 339 aaPredicted RBP11.52□□□□□ -0.57
VPS28-201ENST00000292510 HCAR1Q9BXC0 346 aa11.52□□□□□ -0.57
VPS28-201ENST00000292510 NMNAT2Q9BZQ4 307 aa11.52□□□□□ -0.57
VPS28-201ENST00000292510 GRIP2Q9C0E4 1043 aa11.52□□□□□ -0.57
VPS28-201ENST00000292510 GABARAPL1Q9H0R8 117 aa11.52□□□□□ -0.57
VPS28-201ENST00000292510 CMC2Q9NRP2 79 aa11.52□□□□□ -0.57
VPS28-201ENST00000292510 MRPL22Q9NWU5 206 aaKnown RBP11.52□□□□□ -0.57
VPS28-201ENST00000292510 PLEK2Q9NYT0 353 aa11.52□□□□□ -0.57
VPS28-201ENST00000292510 OAZ3Q9UMX2 235 aa11.52□□□□□ -0.57
VPS28-201ENST00000292510 POLR1DQ9Y2S0 133 aa11.52□□□□□ -0.57
VPS28-201ENST00000292510 SPEF1Q9Y4P9 236 aa11.52□□□□□ -0.57
VPS28-201ENST00000292510 LHFPL6Q9Y693 200 aa11.52□□□□□ -0.57
VPS28-201ENST00000292510 FLNAP21333 2647 aaKnown RBP11.52□□□□□ -0.57
VPS28-201ENST00000292510 TEP1Q99973 2627 aaKnown RBP11.52□□□□□ -0.57
VPS28-201ENST00000292510 TMEM129A0AVI4 362 aa11.51□□□□□ -0.57
VPS28-201ENST00000292510 ANKRD65E5RJM6 399 aa11.51□□□□□ -0.57
VPS28-201ENST00000292510 RER1O15258 196 aa11.51□□□□□ -0.57
VPS28-201ENST00000292510 SGCEO43556 437 aa11.51□□□□□ -0.57
VPS28-201ENST00000292510 DOK2O60496 412 aa11.51□□□□□ -0.57
VPS28-201ENST00000292510 IGHV4-39P01824 125 aa11.51□□□□□ -0.57
VPS28-201ENST00000292510 SPI1P17947 270 aa11.51□□□□□ -0.57
VPS28-201ENST00000292510 GLRXP35754 106 aa11.51□□□□□ -0.57
VPS28-201ENST00000292510 RPS27P42677 84 aaKnown RBP11.51□□□□□ -0.57
VPS28-201ENST00000292510 CRISP1P54107 249 aa11.51□□□□□ -0.57
VPS28-201ENST00000292510 CDK5Q00535 292 aa11.51□□□□□ -0.57
VPS28-201ENST00000292510 VASH1Q7L8A9 365 aaPredicted RBP11.51□□□□□ -0.57
VPS28-201ENST00000292510 LRP11Q86VZ4 500 aa11.51□□□□□ -0.57
VPS28-201ENST00000292510 ZNF101Q8IZC7 436 aa11.51□□□□□ -0.57
VPS28-201ENST00000292510 SVOPLQ8N434 492 aa11.51□□□□□ -0.57
VPS28-201ENST00000292510 SLC7A6Q92536 515 aa11.51□□□□□ -0.57
VPS28-201ENST00000292510 OTULINQ96BN8 352 aa11.51□□□□□ -0.57
VPS28-201ENST00000292510 SYT3Q9BQG1 590 aa11.51□□□□□ -0.57
VPS28-201ENST00000292510 MRPL37Q9BZE1 423 aaKnown RBP11.51□□□□□ -0.57
VPS28-201ENST00000292510 PLK3Q9H4B4 646 aa11.51□□□□□ -0.57
VPS28-201ENST00000292510 KRT84Q9NSB2 600 aa11.51□□□□□ -0.57
VPS28-201ENST00000292510 CMAHPQ9Y471 501 aa11.51□□□□□ -0.57
VPS28-201ENST00000292510 B9A039 149 aa11.5□□□□□ -0.57
VPS28-201ENST00000292510 SURF4O15260 269 aa11.5□□□□□ -0.57
VPS28-201ENST00000292510 LCKP06239 509 aa11.5□□□□□ -0.57
VPS28-201ENST00000292510 PSKH1P11801 424 aa11.5□□□□□ -0.57
VPS28-201ENST00000292510 EPHA2P29317 976 aa11.5□□□□□ -0.57
VPS28-201ENST00000292510 GGT2P36268 569 aa11.5□□□□□ -0.57
VPS28-201ENST00000292510 HTR5AP47898 357 aa11.5□□□□□ -0.57
VPS28-201ENST00000292510 SLC25A1P53007 311 aa11.5□□□□□ -0.57
VPS28-201ENST00000292510 UCP2P55851 309 aa11.5□□□□□ -0.57
VPS28-201ENST00000292510 SNRPD2P62316 118 aaKnown RBP11.5□□□□□ -0.57
VPS28-201ENST00000292510 EFNB3Q15768 340 aa11.5□□□□□ -0.57
VPS28-201ENST00000292510 SPATA46Q5T0L3 261 aa11.5□□□□□ -0.57
VPS28-201ENST00000292510 KDM4DQ6B0I6 523 aa11.5□□□□□ -0.57
VPS28-201ENST00000292510 SLC18B1Q6NT16 456 aa11.5□□□□□ -0.57
VPS28-201ENST00000292510 ZFP1Q6P2D0 407 aa11.5□□□□□ -0.57
VPS28-201ENST00000292510 TMEM154Q6P9G4 183 aa11.5□□□□□ -0.57
VPS28-201ENST00000292510 PARP8Q8N3A8 854 aa11.5□□□□□ -0.57
VPS28-201ENST00000292510 ZNF511Q8NB15 262 aa11.5□□□□□ -0.57
VPS28-201ENST00000292510 DNAJC9Q8WXX5 260 aa11.5□□□□□ -0.57
VPS28-201ENST00000292510 PTP4A1Q93096 173 aa11.5□□□□□ -0.57
VPS28-201ENST00000292510 MRPL24Q96A35 216 aaKnown RBP11.5□□□□□ -0.57
VPS28-201ENST00000292510 TRMT61AQ96FX7 289 aaKnown RBP11.5□□□□□ -0.57
VPS28-201ENST00000292510 CIB1Q99828 191 aa11.5□□□□□ -0.57
VPS28-201ENST00000292510 WACQ9BTA9 647 aa11.5□□□□□ -0.57
VPS28-201ENST00000292510 WDR76Q9H967 626 aa11.5□□□□□ -0.57
VPS28-201ENST00000292510 SLC25A19Q9HC21 320 aa11.5□□□□□ -0.57
VPS28-201ENST00000292510 S100A14Q9HCY8 104 aa11.5□□□□□ -0.57
VPS28-201ENST00000292510 MYEF2Q9P2K5 600 aaKnown RBP11.5□□□□□ -0.57
VPS28-201ENST00000292510 TMEFF2Q9UIK5 374 aaPredicted RBP11.5□□□□□ -0.57
VPS28-201ENST00000292510 ACANP16112 2415 aa11.5□□□□□ -0.57
VPS28-201ENST00000292510 OR6C6A6NF89 314 aa11.49□□□□□ -0.57
VPS28-201ENST00000292510 M0R129 80 aa11.49□□□□□ -0.57
VPS28-201ENST00000292510 SYNGR3O43761 229 aa11.49□□□□□ -0.57
VPS28-201ENST00000292510 LY6HO94772 140 aa11.49□□□□□ -0.57
VPS28-201ENST00000292510 NGFP01138 241 aa11.49□□□□□ -0.57
VPS28-201ENST00000292510 HMGN1P05114 100 aa11.49□□□□□ -0.57
VPS28-201ENST00000292510 DBHP09172 617 aa11.49□□□□□ -0.57
VPS28-201ENST00000292510 ZNF823P16415 610 aa11.49□□□□□ -0.57
VPS28-201ENST00000292510 PCSK6P29122 969 aa11.49□□□□□ -0.57
VPS28-201ENST00000292510 RPS23P62266 143 aaKnown RBP11.49□□□□□ -0.57
VPS28-201ENST00000292510 HIST1H3AP68431 136 aa11.49□□□□□ -0.57
VPS28-201ENST00000292510 PPP2R2BQ00005 443 aa11.49□□□□□ -0.57
VPS28-201ENST00000292510 PTGES3Q15185 160 aaKnown RBP11.49□□□□□ -0.57
VPS28-201ENST00000292510 HIST2H3PS2Q5TEC6 136 aa11.49□□□□□ -0.57
VPS28-201ENST00000292510 LINC01590Q5TEZ4 76 aa11.49□□□□□ -0.57
VPS28-201ENST00000292510 SHEQ5VZ18 495 aa11.49□□□□□ -0.57
VPS28-201ENST00000292510 RGS7BPQ6MZT1 257 aaPredicted RBP11.49□□□□□ -0.57
VPS28-201ENST00000292510 PLBD1Q6P4A8 553 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms