RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 ADH4P08319 380 aa10.8□□□□□ -0.68
CD44-203ENST00000278386 FUT4P22083 530 aa10.8□□□□□ -0.68
CD44-203ENST00000278386 LIMS1P48059 325 aa10.8□□□□□ -0.68
CD44-203ENST00000278386 PRKCDQ05655 676 aa10.8□□□□□ -0.68
CD44-203ENST00000278386 SCRN3Q0VDG4 424 aa10.8□□□□□ -0.68
CD44-203ENST00000278386 ANKDD1AQ495B1 522 aa10.8□□□□□ -0.68
CD44-203ENST00000278386 SPRNQ5BIV9 151 aa10.8□□□□□ -0.68
CD44-203ENST00000278386 ARMCX4Q5H9R4 360 aa10.8□□□□□ -0.68
CD44-203ENST00000278386 CGB2Q6NT52 195 aa10.8□□□□□ -0.68
CD44-203ENST00000278386 C1orf94Q6P1W5 598 aa10.8□□□□□ -0.68
CD44-203ENST00000278386 ARPINQ7Z6K5 226 aa10.8□□□□□ -0.68
CD44-203ENST00000278386 LRRC75AQ8NAA5 344 aa10.8□□□□□ -0.68
CD44-203ENST00000278386 ACOT11Q8WXI4 607 aaPredicted RBP10.8□□□□□ -0.68
CD44-203ENST00000278386 C22orf15Q8WYQ4 148 aa10.8□□□□□ -0.68
CD44-203ENST00000278386 HSH2DQ96JZ2 352 aa10.8□□□□□ -0.68
CD44-203ENST00000278386 POFUT1Q9H488 388 aa10.8□□□□□ -0.68
CD44-203ENST00000278386 RERGLQ9H628 205 aa10.8□□□□□ -0.68
CD44-203ENST00000278386 MAN2C1Q9NTJ4 1040 aa10.8□□□□□ -0.68
CD44-203ENST00000278386 DCAF16Q9NXF7 216 aa10.8□□□□□ -0.68
CD44-203ENST00000278386 ARMCX1Q9P291 453 aa10.8□□□□□ -0.68
CD44-203ENST00000278386 GMPR2Q9P2T1 348 aaKnown RBP10.8□□□□□ -0.68
CD44-203ENST00000278386 SNX13Q9Y5W8 968 aa10.8□□□□□ -0.68
CD44-203ENST00000278386 CXCR6O00574 342 aa10.79□□□□□ -0.68
CD44-203ENST00000278386 SGCEO43556 437 aa10.79□□□□□ -0.68
CD44-203ENST00000278386 FOXH1O75593 365 aa10.79□□□□□ -0.68
CD44-203ENST00000278386 SCG5P05408 212 aa10.79□□□□□ -0.68
CD44-203ENST00000278386 CD55P08174 381 aa10.79□□□□□ -0.68
CD44-203ENST00000278386 SBK2P0C263 348 aa10.79□□□□□ -0.68
CD44-203ENST00000278386 COX5BP10606 129 aa10.79□□□□□ -0.68
CD44-203ENST00000278386 PSG7Q13046 419 aa10.79□□□□□ -0.68
CD44-203ENST00000278386 IFI44LQ53G44 452 aa10.79□□□□□ -0.68
CD44-203ENST00000278386 MESTQ5EB52 335 aa10.79□□□□□ -0.68
CD44-203ENST00000278386 FKBP9P1Q75LS8 142 aa10.79□□□□□ -0.68
CD44-203ENST00000278386 RRM2BQ7LG56 351 aa10.79□□□□□ -0.68
CD44-203ENST00000278386 SYT9Q86SS6 491 aa10.79□□□□□ -0.68
CD44-203ENST00000278386 SPICQ8N5J4 248 aa10.79□□□□□ -0.68
CD44-203ENST00000278386 OR2Z1Q8NG97 314 aa10.79□□□□□ -0.68
CD44-203ENST00000278386 TMEM106BQ9NUM4 274 aa10.79□□□□□ -0.68
CD44-203ENST00000278386 ZNF446Q9NWS9 450 aa10.79□□□□□ -0.68
CD44-203ENST00000278386 CMTM6Q9NX76 183 aa10.79□□□□□ -0.68
CD44-203ENST00000278386 PLEK2Q9NYT0 353 aa10.79□□□□□ -0.68
CD44-203ENST00000278386 PURGQ9UJV8 347 aaKnown RBP10.79□□□□□ -0.68
CD44-203ENST00000278386 POLR1DQ9Y2S0 133 aa10.79□□□□□ -0.68
CD44-203ENST00000278386 AP3M1Q9Y2T2 418 aa10.79□□□□□ -0.68
CD44-203ENST00000278386 PPIAL4AQ9Y536 164 aa10.79□□□□□ -0.68
CD44-203ENST00000278386 DOCK11Q5JSL3 2073 aa10.78□□□□□ -0.68
CD44-203ENST00000278386 A0A087WUU8 490 aa10.78□□□□□ -0.68
CD44-203ENST00000278386 TEX13CA0A0J9YWL9 993 aa10.78□□□□□ -0.68
CD44-203ENST00000278386 TMEM89A2RUT3 159 aa10.78□□□□□ -0.68
CD44-203ENST00000278386 CDC42EP2O14613 210 aa10.78□□□□□ -0.68
CD44-203ENST00000278386 SERPINA1P01009 418 aa10.78□□□□□ -0.68
CD44-203ENST00000278386 IGHV2-70P01814 119 aa10.78□□□□□ -0.68
CD44-203ENST00000278386 CD14P08571 375 aa10.78□□□□□ -0.68
CD44-203ENST00000278386 TNFRSF1AP19438 455 aa10.78□□□□□ -0.68
CD44-203ENST00000278386 FPR2P25090 351 aa10.78□□□□□ -0.68
CD44-203ENST00000278386 RBMXP38159 391 aaKnown RBP10.78□□□□□ -0.68
CD44-203ENST00000278386 COMPP49747 757 aaPredicted RBP10.78□□□□□ -0.68
CD44-203ENST00000278386 LIPEQ05469 1076 aa10.78□□□□□ -0.68
CD44-203ENST00000278386 CDK5R2Q13319 367 aa10.78□□□□□ -0.68
CD44-203ENST00000278386 AQP6Q13520 282 aa10.78□□□□□ -0.68
CD44-203ENST00000278386 KRR1Q13601 381 aaKnown RBP10.78□□□□□ -0.68
CD44-203ENST00000278386 FHL1Q13642 323 aa10.78□□□□□ -0.68
CD44-203ENST00000278386 TBPL2Q6SJ96 375 aa10.78□□□□□ -0.68
CD44-203ENST00000278386 MBOAT2Q6ZWT7 520 aa10.78□□□□□ -0.68
CD44-203ENST00000278386 VASH1Q7L8A9 365 aaPredicted RBP10.78□□□□□ -0.68
CD44-203ENST00000278386 CYP4Z1Q86W10 505 aa10.78□□□□□ -0.68
CD44-203ENST00000278386 RNF113BQ8IZP6 322 aaKnown RBP10.78□□□□□ -0.68
CD44-203ENST00000278386 KLHL36Q8N4N3 616 aa10.78□□□□□ -0.68
CD44-203ENST00000278386 ITLN1Q8WWA0 313 aa10.78□□□□□ -0.68
CD44-203ENST00000278386 FAM162AQ96A26 154 aa10.78□□□□□ -0.68
CD44-203ENST00000278386 RASD2Q96D21 266 aa10.78□□□□□ -0.68
CD44-203ENST00000278386 FAM46AQ96IP4 442 aaKnown RBP10.78□□□□□ -0.68
CD44-203ENST00000278386 Q96M85 177 aa10.78□□□□□ -0.68
CD44-203ENST00000278386 WACQ9BTA9 647 aa10.78□□□□□ -0.68
CD44-203ENST00000278386 ESM1Q9NQ30 184 aa10.78□□□□□ -0.68
CD44-203ENST00000278386 DDX28Q9NUL7 540 aaKnown RBP10.78□□□□□ -0.68
CD44-203ENST00000278386 TBCCD1Q9NVR7 557 aa10.78□□□□□ -0.68
CD44-203ENST00000278386 OPN4Q9UHM6 478 aa10.78□□□□□ -0.68
CD44-203ENST00000278386 TMEM5Q9Y2B1 443 aa10.78□□□□□ -0.68
CD44-203ENST00000278386 TENM1Q9UKZ4 2725 aa10.78□□□□□ -0.68
CD44-203ENST00000278386 PRSS37A4D1T9 235 aa10.77□□□□□ -0.69
CD44-203ENST00000278386 FFAR1O14842 300 aa10.77□□□□□ -0.69
CD44-203ENST00000278386 SURF4O15260 269 aa10.77□□□□□ -0.69
CD44-203ENST00000278386 SPRY1O43609 319 aaPredicted RBP10.77□□□□□ -0.69
CD44-203ENST00000278386 CTLA4P16410 223 aa10.77□□□□□ -0.69
CD44-203ENST00000278386 KITLGP21583 273 aa10.77□□□□□ -0.69
CD44-203ENST00000278386 ZFP36P26651 326 aaKnown RBP10.77□□□□□ -0.69
CD44-203ENST00000278386 SLC7A2P52569 658 aa10.77□□□□□ -0.69
CD44-203ENST00000278386 BTG1P62324 171 aa10.77□□□□□ -0.69
CD44-203ENST00000278386 UBA52P62987 128 aaKnown RBP10.77□□□□□ -0.69
CD44-203ENST00000278386 GUCY1A3Q02108 690 aa10.77□□□□□ -0.69
CD44-203ENST00000278386 ZBED5Q49AG3 693 aa10.77□□□□□ -0.69
CD44-203ENST00000278386 FGD3Q5JSP0 725 aa10.77□□□□□ -0.69
CD44-203ENST00000278386 OTPQ5XKR4 325 aa10.77□□□□□ -0.69
CD44-203ENST00000278386 RBMS3Q6XE24 437 aaKnown RBP10.77□□□□□ -0.69
CD44-203ENST00000278386 CBLL1Q75N03 491 aa10.77□□□□□ -0.69
CD44-203ENST00000278386 OR5AS1Q8N127 324 aa10.77□□□□□ -0.69
CD44-203ENST00000278386 ZDHHC22Q8N966 263 aa10.77□□□□□ -0.69
CD44-203ENST00000278386 SLC7A6Q92536 515 aa10.77□□□□□ -0.69
CD44-203ENST00000278386 POP5Q969H6 163 aaKnown RBP10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms