RNA–Protein interactions for RNA: ENST00000274327.11

TRIM23-202, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-202ENST00000274327 ABCB10Q9NRK6 738 aa12.85□□□□□ -0.35
TRIM23-202ENST00000274327 FRRS1LQ9P0K9 344 aa12.85□□□□□ -0.35
TRIM23-202ENST00000274327 ZNF281Q9Y2X9 895 aa12.85□□□□□ -0.35
TRIM23-202ENST00000274327 ZFHX4Q86UP3 3567 aa12.85□□□□□ -0.35
TRIM23-202ENST00000274327 CELSR3Q9NYQ7 3312 aa12.85□□□□□ -0.35
TRIM23-202ENST00000274327 DHHO43323 396 aa12.85□□□□□ -0.35
TRIM23-202ENST00000274327 SLC43A1O75387 559 aa12.85□□□□□ -0.35
TRIM23-202ENST00000274327 ZNF254O75437 659 aa12.85□□□□□ -0.35
TRIM23-202ENST00000274327 SYNGR4O95473 234 aa12.85□□□□□ -0.35
TRIM23-202ENST00000274327 GSTT2P0CG29 244 aa12.85□□□□□ -0.35
TRIM23-202ENST00000274327 GSTT2BP0CG30 244 aa12.85□□□□□ -0.35
TRIM23-202ENST00000274327 TRAPPC2P0DI81 140 aa12.85□□□□□ -0.35
TRIM23-202ENST00000274327 TRAPPC2BP0DI82 140 aa12.85□□□□□ -0.35
TRIM23-202ENST00000274327 ZNF24P17028 368 aa12.85□□□□□ -0.35
TRIM23-202ENST00000274327 MTNR1BP49286 362 aa12.85□□□□□ -0.35
TRIM23-202ENST00000274327 MXD1Q05195 221 aa12.85□□□□□ -0.35
TRIM23-202ENST00000274327 PAMR1Q6UXH9 720 aa12.85□□□□□ -0.35
TRIM23-202ENST00000274327 AAED1Q7RTV5 226 aa12.85□□□□□ -0.35
TRIM23-202ENST00000274327 CCDC190Q86UF4 302 aa12.85□□□□□ -0.35
TRIM23-202ENST00000274327 SPACA3Q8IXA5 215 aa12.85□□□□□ -0.35
TRIM23-202ENST00000274327 PARP16Q8N5Y8 322 aa12.85□□□□□ -0.35
TRIM23-202ENST00000274327 RNF133Q8WVZ7 376 aa12.85□□□□□ -0.35
TRIM23-202ENST00000274327 RGP1Q92546 391 aaPredicted RBP12.85□□□□□ -0.35
TRIM23-202ENST00000274327 ZNF775Q96BV0 537 aaPredicted RBP12.85□□□□□ -0.35
TRIM23-202ENST00000274327 C4orf45Q96LM5 186 aa12.85□□□□□ -0.35
TRIM23-202ENST00000274327 DCBLD2Q96PD2 775 aa12.85□□□□□ -0.35
TRIM23-202ENST00000274327 C6orf62Q9GZU0 229 aaPredicted RBP12.85□□□□□ -0.35
TRIM23-202ENST00000274327 PPIL3Q9H2H8 161 aaKnown RBP12.85□□□□□ -0.35
TRIM23-202ENST00000274327 SEC61A2Q9H9S3 476 aa12.85□□□□□ -0.35
TRIM23-202ENST00000274327 RNF122Q9H9V4 155 aa12.85□□□□□ -0.35
TRIM23-202ENST00000274327 DKK4Q9UBT3 224 aa12.85□□□□□ -0.35
TRIM23-202ENST00000274327 MCTS1Q9ULC4 181 aaKnown RBP12.85□□□□□ -0.35
TRIM23-202ENST00000274327 LRP12Q9Y561 859 aa12.85□□□□□ -0.35
TRIM23-202ENST00000274327 LHFPL6Q9Y693 200 aa12.85□□□□□ -0.35
TRIM23-202ENST00000274327 A0A1B0GTH9 108 aa12.84□□□□□ -0.35
TRIM23-202ENST00000274327 OR4C45A6NMZ5 311 aa12.84□□□□□ -0.35
TRIM23-202ENST00000274327 TFECO14948 347 aaPredicted RBP12.84□□□□□ -0.35
TRIM23-202ENST00000274327 TBX1O43435 398 aa12.84□□□□□ -0.35
TRIM23-202ENST00000274327 SRSF10O75494 262 aaKnown RBP12.84□□□□□ -0.35
TRIM23-202ENST00000274327 GATBO75879 557 aaKnown RBP12.84□□□□□ -0.35
TRIM23-202ENST00000274327 ZFPL1O95159 310 aa12.84□□□□□ -0.35
TRIM23-202ENST00000274327 CCR9P51686 369 aa12.84□□□□□ -0.35
TRIM23-202ENST00000274327 RIDAP52758 137 aaKnown RBP12.84□□□□□ -0.35
TRIM23-202ENST00000274327 LSM6P62312 80 aaKnown RBP12.84□□□□□ -0.35
TRIM23-202ENST00000274327 YIF1BQ5BJH7 314 aa12.84□□□□□ -0.35
TRIM23-202ENST00000274327 ZMAT1Q5H9K5 638 aa12.84□□□□□ -0.35
TRIM23-202ENST00000274327 CORO6Q6QEF8 472 aa12.84□□□□□ -0.35
TRIM23-202ENST00000274327 CEACAM19Q7Z692 300 aa12.84□□□□□ -0.35
TRIM23-202ENST00000274327 PRSS35Q8N3Z0 413 aa12.84□□□□□ -0.35
TRIM23-202ENST00000274327 NABP1Q96AH0 204 aa12.84□□□□□ -0.35
TRIM23-202ENST00000274327 ULBP2Q9BZM5 246 aa12.84□□□□□ -0.35
TRIM23-202ENST00000274327 C1orf198Q9H425 327 aa12.84□□□□□ -0.35
TRIM23-202ENST00000274327 EXO5Q9H790 373 aa12.84□□□□□ -0.35
TRIM23-202ENST00000274327 NCOA6Q14686 2063 aaPredicted RBP12.84□□□□□ -0.35
TRIM23-202ENST00000274327 A0A087WV48 116 aa12.83□□□□□ -0.35
TRIM23-202ENST00000274327 A0A1B0GVC2 190 aa12.83□□□□□ -0.35
TRIM23-202ENST00000274327 GPR171O14626 319 aa12.83□□□□□ -0.35
TRIM23-202ENST00000274327 EIF2S3P41091 472 aaKnown RBP12.83□□□□□ -0.35
TRIM23-202ENST00000274327 KIR3DL2P43630 455 aa12.83□□□□□ -0.35
TRIM23-202ENST00000274327 HNRNPA0Q13151 305 aaKnown RBP12.83□□□□□ -0.35
TRIM23-202ENST00000274327 ZNF169Q14929 603 aaPredicted RBP12.83□□□□□ -0.35
TRIM23-202ENST00000274327 C3AR1Q16581 482 aa12.83□□□□□ -0.35
TRIM23-202ENST00000274327 WDR38Q5JTN6 314 aa12.83□□□□□ -0.35
TRIM23-202ENST00000274327 FAM27D1Q5T7N8 215 aa12.83□□□□□ -0.35
TRIM23-202ENST00000274327 OR7E24Q6IFN5 339 aa12.83□□□□□ -0.35
TRIM23-202ENST00000274327 ZNF544Q6NX49 715 aa12.83□□□□□ -0.35
TRIM23-202ENST00000274327 SPATC1Q76KD6 591 aa12.83□□□□□ -0.35
TRIM23-202ENST00000274327 OR10S1Q8NGN2 331 aa12.83□□□□□ -0.35
TRIM23-202ENST00000274327 OR5AK2Q8NH90 309 aa12.83□□□□□ -0.35
TRIM23-202ENST00000274327 PHYHIPQ92561 330 aa12.83□□□□□ -0.35
TRIM23-202ENST00000274327 TMEM165Q9HC07 324 aa12.83□□□□□ -0.35
TRIM23-202ENST00000274327 PLEKHB1Q9UF11 243 aaPredicted RBP12.83□□□□□ -0.35
TRIM23-202ENST00000274327 GDF2Q9UK05 429 aaPredicted RBP12.83□□□□□ -0.35
TRIM23-202ENST00000274327 IQCMA0A1B0GVH7 501 aa12.83□□□□□ -0.36
TRIM23-202ENST00000274327 ZNF724A8MTY0 619 aa12.83□□□□□ -0.36
TRIM23-202ENST00000274327 CASKO14936 926 aa12.83□□□□□ -0.36
TRIM23-202ENST00000274327 PNPP00491 289 aa12.83□□□□□ -0.36
TRIM23-202ENST00000274327 PDGFAP04085 211 aa12.83□□□□□ -0.36
TRIM23-202ENST00000274327 UCHL1P09936 223 aa12.83□□□□□ -0.36
TRIM23-202ENST00000274327 MSR1P21757 451 aa12.83□□□□□ -0.36
TRIM23-202ENST00000274327 AGAP6Q5VW22 663 aa12.83□□□□□ -0.36
TRIM23-202ENST00000274327 Q6ZS92 163 aa12.83□□□□□ -0.36
TRIM23-202ENST00000274327 CATSPERDQ86XM0 798 aa12.83□□□□□ -0.36
TRIM23-202ENST00000274327 ASPMQ8IZT6 3477 aa12.83□□□□□ -0.36
TRIM23-202ENST00000274327 FNDC9Q8TBE3 224 aa12.83□□□□□ -0.36
TRIM23-202ENST00000274327 SLAMF6Q96DU3 332 aa12.83□□□□□ -0.36
TRIM23-202ENST00000274327 DCHS1Q96JQ0 3298 aa12.83□□□□□ -0.36
TRIM23-202ENST00000274327 NELFAQ9H3P2 528 aa12.83□□□□□ -0.36
TRIM23-202ENST00000274327 TPK1Q9H3S4 243 aa12.83□□□□□ -0.36
TRIM23-202ENST00000274327 BCO1Q9HAY6 547 aa12.83□□□□□ -0.36
TRIM23-202ENST00000274327 R4GMQ9 66 aa12.83□□□□□ -0.36
TRIM23-202ENST00000274327 SPTBN2O15020 2390 aa12.82□□□□□ -0.36
TRIM23-202ENST00000274327 TRBV5-5A0A0J9YX44 114 aa12.82□□□□□ -0.36
TRIM23-202ENST00000274327 FAM172BPA6NC97 362 aa12.82□□□□□ -0.36
TRIM23-202ENST00000274327 TMEM212A6NML5 194 aa12.82□□□□□ -0.36
TRIM23-202ENST00000274327 DCTDP32321 178 aa12.82□□□□□ -0.36
TRIM23-202ENST00000274327 ZNF84P51523 738 aa12.82□□□□□ -0.36
TRIM23-202ENST00000274327 MRPS34P82930 218 aaKnown RBP12.82□□□□□ -0.36
TRIM23-202ENST00000274327 MFGE8Q08431 387 aaPredicted RBP12.82□□□□□ -0.36
TRIM23-202ENST00000274327 CD300CQ08708 224 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms