RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 SFTPA2Q8IWL1 248 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 SVBPQ8N300 66 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 FAM160A2Q8N612 972 aaPredicted RBP4.19□□□□□ -1.74
VPS13C-201ENST00000249837 OR1J2Q8NGS2 313 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 C14orf79Q96F83 325 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 STACQ99469 402 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 PUS1Q9Y606 427 aaKnown RBP eCLIP4.19□□□□□ -1.74
VPS13C-201ENST00000249837 SULT1C2O00338 296 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 HCRTR1O43613 425 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 NUDT21O43809 227 aaKnown RBP4.19□□□□□ -1.74
VPS13C-201ENST00000249837 ANKRD34CP0C6C1 535 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 RAET1LQ5VY80 246 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 SEZ6L2Q6UXD5 910 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 SLC22A8Q8TCC7 542 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 CXorf58Q96LI9 332 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 MOGAT1Q96PD6 335 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 PLA2G2FQ9BZM2 168 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 TRIM64BA6NI03 449 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 NRG2O14511 850 aaPredicted RBP4.19□□□□□ -1.74
VPS13C-201ENST00000249837 LPLP06858 475 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 CSNK1EP49674 416 aaKnown RBP4.19□□□□□ -1.74
VPS13C-201ENST00000249837 VWA2Q5GFL6 755 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 C3orf33Q6P1S2 294 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 STAC2Q6ZMT1 411 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 SPRED2Q7Z698 418 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 EID2Q8N6I1 236 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 COX14Q96I36 57 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 ABHD6Q9BV23 337 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 CENPVL1A0A0U1RR11 272 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 NPIPB8E9PQR5 432 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 KLK3P07288 261 aaPredicted RBP4.19□□□□□ -1.74
VPS13C-201ENST00000249837 TPT1P13693 172 aaKnown RBP4.19□□□□□ -1.74
VPS13C-201ENST00000249837 BDH1Q02338 343 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 SRYQ05066 204 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 FCRL6Q6DN72 434 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 DND1Q8IYX4 353 aaKnown RBP4.19□□□□□ -1.74
VPS13C-201ENST00000249837 SORCS2Q96PQ0 1159 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 DCXRQ7Z4W1 244 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 DUSP18Q8NEJ0 188 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 HAVCR2Q8TDQ0 301 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 SLAMF9Q96A28 289 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 ZC3HAV1LQ96H79 300 aaKnown RBP4.19□□□□□ -1.74
VPS13C-201ENST00000249837 SIGLEC11Q96RL6 698 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 KIF25Q9UIL4 384 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 KCNS2Q9ULS6 477 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 FOXJ3Q9UPW0 622 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 LOC107986453A0A1B0GWG9 222 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 OTOL1A6NHN0 477 aaPredicted RBP4.19□□□□□ -1.74
VPS13C-201ENST00000249837 TSFMP43897 325 aaKnown RBP4.19□□□□□ -1.74
VPS13C-201ENST00000249837 UBE2IP63279 158 aaKnown RBP4.19□□□□□ -1.74
VPS13C-201ENST00000249837 HSD11B2P80365 405 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 CLVS2Q5SYC1 327 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 ZNF425Q6IV72 752 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 GPR137Q96N19 417 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 CHRDQ9H2X0 955 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 BIN3Q9NQY0 253 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 B3GALT5Q9Y2C3 310 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 HRKO00198 91 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 EN2P19622 333 aaPredicted RBP4.19□□□□□ -1.74
VPS13C-201ENST00000249837 CDKN2AP42771 156 aaKnown RBP4.19□□□□□ -1.74
VPS13C-201ENST00000249837 C9orf135Q5VTT2 229 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 PWWP2BQ6NUJ5 590 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 RTL10Q7L3V2 364 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 OR1M1Q8NGA1 313 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 C4orf45Q96LM5 186 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 NUDT9Q9BW91 350 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 C8orf33Q9H7E9 229 aaPredicted RBP4.19□□□□□ -1.74
VPS13C-201ENST00000249837 FLRT3Q9NZU0 649 aa4.19□□□□□ -1.74
VPS13C-201ENST00000249837 ALPK3Q96L96 1907 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 CCDC85CA6NKD9 419 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 A8MVM7 634 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 SIGLEC5O15389 551 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 TMIGD3P0DMS9 266 aaPredicted RBP4.18□□□□□ -1.74
VPS13C-201ENST00000249837 COL9A1P20849 921 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 ZNF93P35789 620 aaPredicted RBP4.18□□□□□ -1.74
VPS13C-201ENST00000249837 CAV2P51636 162 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 HTRA4P83105 476 aaPredicted RBP4.18□□□□□ -1.74
VPS13C-201ENST00000249837 EGR3Q06889 387 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 SIGLEC14Q08ET2 396 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 MLC1Q15049 377 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 PRTGQ2VWP7 1150 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 C1QL3Q5VWW1 255 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 OR2L13Q8N349 312 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 TCTEX1D2Q8WW35 142 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 TMEM59Q9BXS4 323 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 SCPEP1Q9HB40 452 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 OIP5O43482 229 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 CD1CP29017 333 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 CTHP32929 405 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 PHLDA2Q53GA4 152 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 KIAA0895LQ68EN5 471 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 TCEAL6Q6IPX3 200 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 H1FNTQ75WM6 255 aaPredicted RBP4.18□□□□□ -1.74
VPS13C-201ENST00000249837 ZNF784Q8NCA9 323 aaPredicted RBP4.18□□□□□ -1.74
VPS13C-201ENST00000249837 OR14A16Q8NHC5 309 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 FAM213BQ8TBF2 198 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 ST7LQ8TDW4 575 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 LPAR4Q99677 370 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 C20orf24Q9BUV8 137 aa4.18□□□□□ -1.74
VPS13C-201ENST00000249837 OR51B6Q9H340 312 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms