RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 RPUSD3Q6P087 351 aaKnown RBP16.54■□□□□ 0.24
TNFSF9-201ENST00000245817 PLXDC2Q6UX71 529 aa16.54■□□□□ 0.24
TNFSF9-201ENST00000245817 LINC00299Q6ZSB3 139 aa16.54■□□□□ 0.24
TNFSF9-201ENST00000245817 RBMXL3Q8N7X1 1067 aaKnown RBP16.54■□□□□ 0.24
TNFSF9-201ENST00000245817 RPS4Y2Q8TD47 263 aa16.54■□□□□ 0.24
TNFSF9-201ENST00000245817 HSD17B8Q92506 261 aa16.54■□□□□ 0.24
TNFSF9-201ENST00000245817 ABHD17AQ96GS6 310 aa16.54■□□□□ 0.24
TNFSF9-201ENST00000245817 C6orf62Q9GZU0 229 aaPredicted RBP16.54■□□□□ 0.24
TNFSF9-201ENST00000245817 PRDM14Q9GZV8 571 aa16.54■□□□□ 0.24
TNFSF9-201ENST00000245817 SLCO5A1Q9H2Y9 848 aa16.54■□□□□ 0.24
TNFSF9-201ENST00000245817 LHFPL6Q9Y693 200 aa16.54■□□□□ 0.24
TNFSF9-201ENST00000245817 A3GALT2U3KPV4 340 aa16.54■□□□□ 0.24
TNFSF9-201ENST00000245817 ARL6IP5O75915 188 aa16.53■□□□□ 0.24
TNFSF9-201ENST00000245817 ZFPL1O95159 310 aa16.53■□□□□ 0.24
TNFSF9-201ENST00000245817 MRPS34P82930 218 aaKnown RBP16.53■□□□□ 0.24
TNFSF9-201ENST00000245817 MOGQ16653 247 aa16.53■□□□□ 0.24
TNFSF9-201ENST00000245817 ZNF829Q3KNS6 432 aaPredicted RBP16.53■□□□□ 0.24
TNFSF9-201ENST00000245817 FDX2Q6P4F2 183 aa16.53■□□□□ 0.24
TNFSF9-201ENST00000245817 FOXL2NBQ6ZUU3 175 aa16.53■□□□□ 0.24
TNFSF9-201ENST00000245817 PHYHIPQ92561 330 aa16.53■□□□□ 0.24
TNFSF9-201ENST00000245817 SLC25A46Q96AG3 418 aa16.53■□□□□ 0.24
TNFSF9-201ENST00000245817 ALKBH3Q96Q83 286 aaPredicted RBP16.53■□□□□ 0.24
TNFSF9-201ENST00000245817 TAAR6Q96RI8 345 aa16.53■□□□□ 0.24
TNFSF9-201ENST00000245817 CLEC4AQ9UMR7 237 aa16.53■□□□□ 0.24
TNFSF9-201ENST00000245817 KIAA1549Q9HCM3 1950 aa16.53■□□□□ 0.24
TNFSF9-201ENST00000245817 ZNF878C9JN71 531 aa16.53■□□□□ 0.24
TNFSF9-201ENST00000245817 HSD11B1P28845 292 aa16.53■□□□□ 0.24
TNFSF9-201ENST00000245817 S100A5P33763 92 aa16.53■□□□□ 0.24
TNFSF9-201ENST00000245817 OPRL1P41146 370 aa16.53■□□□□ 0.24
TNFSF9-201ENST00000245817 MTNR1BP49286 362 aa16.53■□□□□ 0.24
TNFSF9-201ENST00000245817 CCR9P51686 369 aa16.53■□□□□ 0.24
TNFSF9-201ENST00000245817 CXADRP78310 365 aa16.53■□□□□ 0.24
TNFSF9-201ENST00000245817 ZMAT1Q5H9K5 638 aa16.53■□□□□ 0.24
TNFSF9-201ENST00000245817 RHOUQ7L0Q8 258 aa16.53■□□□□ 0.24
TNFSF9-201ENST00000245817 ZNF100Q8IYN0 542 aa16.53■□□□□ 0.24
TNFSF9-201ENST00000245817 LRRC18Q8N456 261 aa16.53■□□□□ 0.24
TNFSF9-201ENST00000245817 GJC3Q8NFK1 279 aa16.53■□□□□ 0.24
TNFSF9-201ENST00000245817 OR13C5Q8NGS8 318 aa16.53■□□□□ 0.24
TNFSF9-201ENST00000245817 HTRA1Q92743 480 aa16.53■□□□□ 0.24
TNFSF9-201ENST00000245817 EXTL1Q92935 676 aa16.53■□□□□ 0.24
TNFSF9-201ENST00000245817 MAP6Q96JE9 813 aa16.53■□□□□ 0.24
TNFSF9-201ENST00000245817 CNTNAP3BQ96NU0 1288 aa16.53■□□□□ 0.24
TNFSF9-201ENST00000245817 ZNF416Q9BWM5 594 aa16.53■□□□□ 0.24
TNFSF9-201ENST00000245817 CNTNAP3Q9BZ76 1288 aa16.53■□□□□ 0.24
TNFSF9-201ENST00000245817 CRNNQ9UBG3 495 aaPredicted RBP16.53■□□□□ 0.24
TNFSF9-201ENST00000245817 R4GMQ9 66 aa16.53■□□□□ 0.24
TNFSF9-201ENST00000245817 PMF1-BGLAPU3KQ54 211 aa16.53■□□□□ 0.24
TNFSF9-201ENST00000245817 VGLL3A8MV65 326 aa16.52■□□□□ 0.23
TNFSF9-201ENST00000245817 ZNF879B4DU55 563 aa16.52■□□□□ 0.23
TNFSF9-201ENST00000245817 SC5DO75845 299 aa16.52■□□□□ 0.23
TNFSF9-201ENST00000245817 MAPK3P27361 379 aaPredicted RBP16.52■□□□□ 0.23
TNFSF9-201ENST00000245817 ROR2Q01974 943 aaKnown RBP16.52■□□□□ 0.23
TNFSF9-201ENST00000245817 HNRNPA0Q13151 305 aaKnown RBP16.52■□□□□ 0.23
TNFSF9-201ENST00000245817 CEACAM16Q2WEN9 425 aa16.52■□□□□ 0.23
TNFSF9-201ENST00000245817 SIAH3Q8IW03 269 aa16.52■□□□□ 0.23
TNFSF9-201ENST00000245817 TEX19Q8NA77 164 aa16.52■□□□□ 0.23
TNFSF9-201ENST00000245817 ZFAND2BQ8WV99 257 aa16.52■□□□□ 0.23
TNFSF9-201ENST00000245817 RNF166Q96A37 237 aaPredicted RBP16.52■□□□□ 0.23
TNFSF9-201ENST00000245817 APH1AQ96BI3 265 aa16.52■□□□□ 0.23
TNFSF9-201ENST00000245817 C4orf45Q96LM5 186 aa16.52■□□□□ 0.23
TNFSF9-201ENST00000245817 DACH2Q96NX9 599 aa16.52■□□□□ 0.23
TNFSF9-201ENST00000245817 LINC00470Q9BZP3 86 aa16.52■□□□□ 0.23
TNFSF9-201ENST00000245817 NIPAL2Q9H841 368 aa16.52■□□□□ 0.23
TNFSF9-201ENST00000245817 GPR35Q9HC97 309 aa16.52■□□□□ 0.23
TNFSF9-201ENST00000245817 GP6Q9HCN6 339 aa16.52■□□□□ 0.23
TNFSF9-201ENST00000245817 UPB1Q9UBR1 384 aa16.52■□□□□ 0.23
TNFSF9-201ENST00000245817 A0A1B0GTH9 108 aa16.51■□□□□ 0.23
TNFSF9-201ENST00000245817 TMEM269A0A1B0GVZ9 245 aa16.51■□□□□ 0.23
TNFSF9-201ENST00000245817 LOC110117498-PIK3R3F6TDL0 507 aa16.51■□□□□ 0.23
TNFSF9-201ENST00000245817 K7EM74 188 aa16.51■□□□□ 0.23
TNFSF9-201ENST00000245817 RER1O15258 196 aa16.51■□□□□ 0.23
TNFSF9-201ENST00000245817 DCTDP32321 178 aa16.51■□□□□ 0.23
TNFSF9-201ENST00000245817 PLEKHN1Q494U1 663 aaPredicted RBP16.51■□□□□ 0.23
TNFSF9-201ENST00000245817 WDR38Q5JTN6 314 aa16.51■□□□□ 0.23
TNFSF9-201ENST00000245817 TSPO2Q5TGU0 170 aa16.51■□□□□ 0.23
TNFSF9-201ENST00000245817 FAM27BQ5VT28 67 aa16.51■□□□□ 0.23
TNFSF9-201ENST00000245817 CFAP77Q6ZQR2 320 aa16.51■□□□□ 0.23
TNFSF9-201ENST00000245817 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.51■□□□□ 0.23
TNFSF9-201ENST00000245817 SNRNP27Q8WVK2 155 aaKnown RBP16.51■□□□□ 0.23
TNFSF9-201ENST00000245817 S100ZQ8WXG8 99 aa16.51■□□□□ 0.23
TNFSF9-201ENST00000245817 AP3S1Q92572 193 aa16.51■□□□□ 0.23
TNFSF9-201ENST00000245817 NABP1Q96AH0 204 aa16.51■□□□□ 0.23
TNFSF9-201ENST00000245817 OR14A2Q96R54 314 aa16.51■□□□□ 0.23
TNFSF9-201ENST00000245817 TRIB1Q96RU8 372 aa16.51■□□□□ 0.23
TNFSF9-201ENST00000245817 FOXB1Q99853 325 aa16.51■□□□□ 0.23
TNFSF9-201ENST00000245817 KCNS3Q9BQ31 491 aa16.51■□□□□ 0.23
TNFSF9-201ENST00000245817 PLSCR2Q9NRY7 297 aa16.51■□□□□ 0.23
TNFSF9-201ENST00000245817 GLRX2Q9NS18 164 aa16.51■□□□□ 0.23
TNFSF9-201ENST00000245817 TP53TG5Q9Y2B4 290 aa16.51■□□□□ 0.23
TNFSF9-201ENST00000245817 EMC9Q9Y3B6 208 aa16.51■□□□□ 0.23
TNFSF9-201ENST00000245817 MAP1BP46821 2468 aaKnown RBP16.51■□□□□ 0.23
TNFSF9-201ENST00000245817 OR14I1A6ND48 311 aa16.5■□□□□ 0.23
TNFSF9-201ENST00000245817 OR4C45A6NMZ5 311 aa16.5■□□□□ 0.23
TNFSF9-201ENST00000245817 TGM6O95932 706 aa16.5■□□□□ 0.23
TNFSF9-201ENST00000245817 WNT11O96014 354 aa16.5■□□□□ 0.23
TNFSF9-201ENST00000245817 CLEC2LP0C7M8 214 aa16.5■□□□□ 0.23
TNFSF9-201ENST00000245817 OCM2P0CE71 109 aa16.5■□□□□ 0.23
TNFSF9-201ENST00000245817 RPS11P62280 158 aaKnown RBP eCLIP16.5■□□□□ 0.23
TNFSF9-201ENST00000245817 DYNC1I2Q13409 638 aaKnown RBP16.5■□□□□ 0.23
TNFSF9-201ENST00000245817 ODF4Q2M2E3 257 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms