RNA–Protein interactions for RNA: ENST00000244763.8

SSR1-201, Transcript of signal sequence receptor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR1, Length 9,669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-201ENST00000244763 C20orf85Q9H1P6 137 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 MMP28Q9H239 520 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 HRH4Q9H3N8 390 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 FN3KRPQ9HA64 309 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 C2CD4DB7Z1M9 353 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 NRASP01111 189 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 GPR12P47775 334 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 FOXC1Q12948 553 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 FAM162BQ5T6X4 162 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 TSEN54Q7Z6J9 526 aaKnown RBP6.7□□□□□ -1.34
SSR1-201ENST00000244763 OR2T11Q8NH01 316 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 SLAMF6Q96DU3 332 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 TEAD3Q99594 435 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 BCL2L10Q9HD36 194 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 EXOSC3Q9NQT5 275 aaKnown RBP6.7□□□□□ -1.34
SSR1-201ENST00000244763 RBFOX1Q9NWB1 397 aaKnown RBP6.7□□□□□ -1.34
SSR1-201ENST00000244763 CXXC1Q9P0U4 656 aaPredicted RBP6.7□□□□□ -1.34
SSR1-201ENST00000244763 C5orf49A4QMS7 147 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 HSD17B6O14756 317 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 TAAR5O14804 337 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 HOXC4P09017 264 aaPredicted RBP6.7□□□□□ -1.34
SSR1-201ENST00000244763 ST6GAL1P15907 406 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 CNR1P21554 472 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 JMJD6Q6NYC1 403 aaPredicted RBP6.7□□□□□ -1.34
SSR1-201ENST00000244763 GLIPR1L1Q6UWM5 242 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 OIT3Q8WWZ8 545 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 C1QTNF3Q9BXJ4 246 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 RPH3ALQ9UNE2 315 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 SLC17A4Q9Y2C5 497 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 A0A1W2PR48 441 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 M0R1B8 84 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 F10P00742 488 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 IGLV3-25P01717 112 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 NUDT7P0C024 238 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 UBE2KP61086 200 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 FLI1Q01543 452 aaPredicted RBP6.7□□□□□ -1.34
SSR1-201ENST00000244763 MC2RQ01718 297 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 LRRC10Q5BKY1 277 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 CA13Q8N1Q1 262 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 FAM71CQ8NEG0 241 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 SLC30A7Q8NEW0 376 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 TAAR6Q96RI8 345 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 TXNIPQ9H3M7 391 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 ESRP2Q9H6T0 727 aaKnown RBP6.7□□□□□ -1.34
SSR1-201ENST00000244763 LAP3P28838 519 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 TRIM23P36406 574 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 ZNF468Q5VIY5 522 aaPredicted RBP6.7□□□□□ -1.34
SSR1-201ENST00000244763 WFDC8Q8IUA0 241 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 Q8IYB0 196 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 OR2V1Q8NHB1 315 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 SMIM3Q9BZL3 60 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 AMBRA1Q9C0C7 1298 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 BHLHE40O14503 412 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 LCMT2O60294 686 aaKnown RBP6.7□□□□□ -1.34
SSR1-201ENST00000244763 FBXO24O75426 580 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 SHC1P29353 583 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 HOXD11P31277 338 aaPredicted RBP6.7□□□□□ -1.34
SSR1-201ENST00000244763 TGM4P49221 684 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 COX20Q5RI15 118 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 TRNP1Q6NT89 227 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 ZDHHC23Q8IYP9 409 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 TMEM130Q8N3G9 435 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 FAM213BQ8TBF2 198 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 GATA6Q92908 595 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 TUBG2Q9NRH3 451 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 ST8SIA3O43173 380 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 EFSO43281 561 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 CPEP16870 476 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 RPL34P49207 117 aaKnown RBP6.7□□□□□ -1.34
SSR1-201ENST00000244763 PLA1AQ53H76 456 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 OTUD1Q5VV17 481 aaPredicted RBP6.7□□□□□ -1.34
SSR1-201ENST00000244763 OGFOD3Q6PK18 319 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 FOXQ1Q9C009 403 aa6.7□□□□□ -1.34
SSR1-201ENST00000244763 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.69□□□□□ -1.34
SSR1-201ENST00000244763 RPS10-NUDT3A0A1W2PQS6 291 aa6.69□□□□□ -1.34
SSR1-201ENST00000244763 BMP1P13497 986 aa6.69□□□□□ -1.34
SSR1-201ENST00000244763 GABRA1P14867 456 aa6.69□□□□□ -1.34
SSR1-201ENST00000244763 NKX2-1P43699 371 aaPredicted RBP6.69□□□□□ -1.34
SSR1-201ENST00000244763 SMIM21Q3B7S5 101 aa6.69□□□□□ -1.34
SSR1-201ENST00000244763 SSX8Q7RTT4 187 aa6.69□□□□□ -1.34
SSR1-201ENST00000244763 THNSL2Q86YJ6 484 aa6.69□□□□□ -1.34
SSR1-201ENST00000244763 C1orf210Q8IVY1 113 aa6.69□□□□□ -1.34
SSR1-201ENST00000244763 GNPNAT1Q96EK6 184 aaPredicted RBP6.69□□□□□ -1.34
SSR1-201ENST00000244763 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.69□□□□□ -1.34
SSR1-201ENST00000244763 TMEM129A0AVI4 362 aa6.69□□□□□ -1.34
SSR1-201ENST00000244763 TERTO14746 1132 aaKnown RBP6.69□□□□□ -1.34
SSR1-201ENST00000244763 TNFSF12O43508 249 aa6.69□□□□□ -1.34
SSR1-201ENST00000244763 EDN3P14138 238 aa6.69□□□□□ -1.34
SSR1-201ENST00000244763 FOLR1P15328 257 aa6.69□□□□□ -1.34
SSR1-201ENST00000244763 PMPCAQ10713 525 aa6.69□□□□□ -1.34
SSR1-201ENST00000244763 TIGITQ495A1 244 aa6.69□□□□□ -1.34
SSR1-201ENST00000244763 TRMT12Q53H54 448 aaKnown RBP6.69□□□□□ -1.34
SSR1-201ENST00000244763 OR51F2Q8NH61 342 aa6.69□□□□□ -1.34
SSR1-201ENST00000244763 PIGTQ969N2 578 aa6.69□□□□□ -1.34
SSR1-201ENST00000244763 REEP6Q96HR9 211 aa6.69□□□□□ -1.34
SSR1-201ENST00000244763 POMT2Q9UKY4 750 aa6.69□□□□□ -1.34
SSR1-201ENST00000244763 SNX11Q9Y5W9 270 aa6.69□□□□□ -1.34
SSR1-201ENST00000244763 SLCO1B1Q9Y6L6 691 aa6.69□□□□□ -1.34
SSR1-201ENST00000244763 KRBOX1C9JBD0 128 aa6.69□□□□□ -1.34
SSR1-201ENST00000244763 K7ESM1 405 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms