RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 TCTN2Q96GX1 697 aa18.49■□□□□ 0.55
SNX3-201ENST00000230085 NPAS1Q99742 590 aa18.49■□□□□ 0.55
SNX3-201ENST00000230085 G6PC3Q9BUM1 346 aa18.49■□□□□ 0.55
SNX3-201ENST00000230085 PIGMQ9H3S5 423 aa18.49■□□□□ 0.55
SNX3-201ENST00000230085 PDE7BQ9NP56 450 aa18.49■□□□□ 0.55
SNX3-201ENST00000230085 KLK13Q9UKR3 277 aa18.49■□□□□ 0.55
SNX3-201ENST00000230085 PLEKHA6Q9Y2H5 1048 aa18.49■□□□□ 0.55
SNX3-201ENST00000230085 LOXL2Q9Y4K0 774 aa18.49■□□□□ 0.55
SNX3-201ENST00000230085 ADAMTS20P59510 1910 aa18.48■□□□□ 0.55
SNX3-201ENST00000230085 CELSR3Q9NYQ7 3312 aa18.48■□□□□ 0.55
SNX3-201ENST00000230085 TMEM200CA6NKL6 621 aa18.48■□□□□ 0.55
SNX3-201ENST00000230085 IGKV1D-16P01601 117 aa18.48■□□□□ 0.55
SNX3-201ENST00000230085 PNMTP11086 282 aa18.48■□□□□ 0.55
SNX3-201ENST00000230085 PTHLHP12272 177 aa18.48■□□□□ 0.55
SNX3-201ENST00000230085 HOXB1P14653 301 aaPredicted RBP18.48■□□□□ 0.55
SNX3-201ENST00000230085 ADH7P40394 386 aa18.48■□□□□ 0.55
SNX3-201ENST00000230085 RAB38P57729 211 aa18.48■□□□□ 0.55
SNX3-201ENST00000230085 PDSS1Q5T2R2 415 aa18.48■□□□□ 0.55
SNX3-201ENST00000230085 STEAP1BQ6NZ63 245 aa18.48■□□□□ 0.55
SNX3-201ENST00000230085 C12orf45Q8N5I9 185 aaPredicted RBP18.48■□□□□ 0.55
SNX3-201ENST00000230085 OR5M8Q8NGP6 311 aa18.48■□□□□ 0.55
SNX3-201ENST00000230085 C3orf49Q96BT1 292 aa18.48■□□□□ 0.55
SNX3-201ENST00000230085 Q96M85 177 aa18.48■□□□□ 0.55
SNX3-201ENST00000230085 VSTM2LQ96N03 204 aa18.48■□□□□ 0.55
SNX3-201ENST00000230085 SCNM1Q9BWG6 230 aa18.48■□□□□ 0.55
SNX3-201ENST00000230085 GPN3Q9UHW5 284 aaPredicted RBP18.48■□□□□ 0.55
SNX3-201ENST00000230085 PLCL2Q9UPR0 1127 aa18.48■□□□□ 0.55
SNX3-201ENST00000230085 TRAV8-7A0A075B6U6 113 aa18.47■□□□□ 0.55
SNX3-201ENST00000230085 CCDC187A0A096LP49 1063 aa18.47■□□□□ 0.55
SNX3-201ENST00000230085 LOC100289279A0A1B0GTE1 492 aa18.47■□□□□ 0.55
SNX3-201ENST00000230085 POM121CA8CG34 1229 aa18.47■□□□□ 0.55
SNX3-201ENST00000230085 RLN1P04808 185 aa18.47■□□□□ 0.55
SNX3-201ENST00000230085 OR8G3PP0DMU2 310 aa18.47■□□□□ 0.55
SNX3-201ENST00000230085 CDKN2AP42771 156 aaKnown RBP18.47■□□□□ 0.55
SNX3-201ENST00000230085 ZMYND11Q15326 602 aa18.47■□□□□ 0.55
SNX3-201ENST00000230085 DEFB110Q30KQ9 67 aa18.47■□□□□ 0.55
SNX3-201ENST00000230085 LEG1Q6P5S2 330 aa18.47■□□□□ 0.55
SNX3-201ENST00000230085 OR52R1Q8NGF1 315 aa18.47■□□□□ 0.55
SNX3-201ENST00000230085 OR51S1Q8NGJ8 323 aa18.47■□□□□ 0.55
SNX3-201ENST00000230085 PMEPA1Q969W9 287 aa18.47■□□□□ 0.55
SNX3-201ENST00000230085 MARC2Q969Z3 335 aa18.47■□□□□ 0.55
SNX3-201ENST00000230085 RASD2Q96D21 266 aa18.47■□□□□ 0.55
SNX3-201ENST00000230085 WDR76Q9H967 626 aa18.47■□□□□ 0.55
SNX3-201ENST00000230085 NDRG3Q9UGV2 375 aa18.47■□□□□ 0.55
SNX3-201ENST00000230085 TNFSF18Q9UNG2 199 aa18.47■□□□□ 0.55
SNX3-201ENST00000230085 KLHDC2Q9Y2U9 406 aa18.47■□□□□ 0.55
SNX3-201ENST00000230085 IGKV1D-42A0A075B6H8 117 aa18.47■□□□□ 0.55
SNX3-201ENST00000230085 BLACEA4D250 179 aa18.47■□□□□ 0.55
SNX3-201ENST00000230085 BCL2L11O43521 198 aa18.47■□□□□ 0.55
SNX3-201ENST00000230085 SIX6O95475 246 aa18.47■□□□□ 0.55
SNX3-201ENST00000230085 CD74P04233 296 aa18.47■□□□□ 0.55
SNX3-201ENST00000230085 GTF2F2P13984 249 aa18.47■□□□□ 0.55
SNX3-201ENST00000230085 PRKACAP17612 351 aa18.47■□□□□ 0.55
SNX3-201ENST00000230085 ALOX5APP20292 161 aa18.47■□□□□ 0.55
SNX3-201ENST00000230085 CNR1P21554 472 aa18.47■□□□□ 0.55
SNX3-201ENST00000230085 ERVK-25P63136 954 aa18.47■□□□□ 0.55
SNX3-201ENST00000230085 ID2Q02363 134 aa18.47■□□□□ 0.55
SNX3-201ENST00000230085 VWA2Q5GFL6 755 aa18.47■□□□□ 0.55
SNX3-201ENST00000230085 JMJD6Q6NYC1 403 aaPredicted RBP18.47■□□□□ 0.55
SNX3-201ENST00000230085 OR10K1Q8NGX5 313 aa18.47■□□□□ 0.55
SNX3-201ENST00000230085 C4orf45Q96LM5 186 aa18.47■□□□□ 0.55
SNX3-201ENST00000230085 DCBLD2Q96PD2 775 aa18.47■□□□□ 0.55
SNX3-201ENST00000230085 OR6C1Q96RD1 312 aa18.47■□□□□ 0.55
SNX3-201ENST00000230085 SLC2A8Q9NY64 477 aa18.47■□□□□ 0.55
SNX3-201ENST00000230085 TMEM72A0PK05 275 aa18.46■□□□□ 0.55
SNX3-201ENST00000230085 NUDT19A8MXV4 375 aa18.46■□□□□ 0.55
SNX3-201ENST00000230085 IGLV3-21P80748 117 aaPredicted RBP18.46■□□□□ 0.55
SNX3-201ENST00000230085 SORDQ00796 357 aa18.46■□□□□ 0.55
SNX3-201ENST00000230085 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.46■□□□□ 0.55
SNX3-201ENST00000230085 SHEQ5VZ18 495 aa18.46■□□□□ 0.55
SNX3-201ENST00000230085 LIN54Q6MZP7 749 aa18.46■□□□□ 0.55
SNX3-201ENST00000230085 ATRAIDQ6UW56 229 aa18.46■□□□□ 0.55
SNX3-201ENST00000230085 ZNF546Q86UE3 836 aa18.46■□□□□ 0.55
SNX3-201ENST00000230085 JAZF1Q86VZ6 243 aa18.46■□□□□ 0.55
SNX3-201ENST00000230085 GABRG1Q8N1C3 465 aa18.46■□□□□ 0.55
SNX3-201ENST00000230085 PTX4Q96A99 478 aa18.46■□□□□ 0.55
SNX3-201ENST00000230085 ADAD1Q96M93 576 aaKnown RBP18.46■□□□□ 0.55
SNX3-201ENST00000230085 FGF21Q9NSA1 209 aa18.46■□□□□ 0.55
SNX3-201ENST00000230085 SERINC4A6NH21 518 aa18.45■□□□□ 0.54
SNX3-201ENST00000230085 H0YGG7 62 aa18.45■□□□□ 0.54
SNX3-201ENST00000230085 CTSBP07858 339 aa18.45■□□□□ 0.54
SNX3-201ENST00000230085 OR4E1P0C645 316 aa18.45■□□□□ 0.54
SNX3-201ENST00000230085 JMJD7P0C870 316 aa18.45■□□□□ 0.54
SNX3-201ENST00000230085 FSTP19883 344 aa18.45■□□□□ 0.54
SNX3-201ENST00000230085 MAGEB1P43366 347 aa18.45■□□□□ 0.54
SNX3-201ENST00000230085 GABRA4P48169 554 aa18.45■□□□□ 0.54
SNX3-201ENST00000230085 ARF3P61204 181 aaPredicted RBP18.45■□□□□ 0.54
SNX3-201ENST00000230085 EIF3IQ13347 325 aaKnown RBP18.45■□□□□ 0.54
SNX3-201ENST00000230085 ZNF74Q16587 644 aa18.45■□□□□ 0.54
SNX3-201ENST00000230085 GLT8D1Q68CQ7 371 aa18.45■□□□□ 0.54
SNX3-201ENST00000230085 OR4D10Q8NGI6 311 aa18.45■□□□□ 0.54
SNX3-201ENST00000230085 TMEM106AQ96A25 262 aa18.45■□□□□ 0.54
SNX3-201ENST00000230085 RERGQ96A58 199 aaPredicted RBP18.45■□□□□ 0.54
SNX3-201ENST00000230085 SMAD5Q99717 465 aaKnown RBP18.45■□□□□ 0.54
SNX3-201ENST00000230085 CHRNA10Q9GZZ6 450 aa18.45■□□□□ 0.54
SNX3-201ENST00000230085 EXO5Q9H790 373 aa18.45■□□□□ 0.54
SNX3-201ENST00000230085 PISDQ9UG56 409 aa18.45■□□□□ 0.54
SNX3-201ENST00000230085 TMEM82A0PJX8 343 aa18.45■□□□□ 0.54
SNX3-201ENST00000230085 RNF222A6NCQ9 220 aa18.45■□□□□ 0.54
SNX3-201ENST00000230085 APOC3P02656 99 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms