RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 CCT8L2Q96SF2 557 aa12.14□□□□□ -0.47
GPN3-201ENST00000228827 DECR2Q9NUI1 292 aa12.14□□□□□ -0.47
GPN3-201ENST00000228827 VSX1Q9NZR4 365 aaPredicted RBP12.14□□□□□ -0.47
GPN3-201ENST00000228827 JMJD1CQ15652 2540 aa12.13□□□□□ -0.47
GPN3-201ENST00000228827 B2RBV5 119 aa12.13□□□□□ -0.47
GPN3-201ENST00000228827 HAX1O00165 279 aa12.13□□□□□ -0.47
GPN3-201ENST00000228827 SGCEO43556 437 aa12.13□□□□□ -0.47
GPN3-201ENST00000228827 SPRY3O43610 288 aa12.13□□□□□ -0.47
GPN3-201ENST00000228827 RP2O75695 350 aa12.13□□□□□ -0.47
GPN3-201ENST00000228827 ABHD16AO95870 558 aa12.13□□□□□ -0.47
GPN3-201ENST00000228827 MT-ND5P03915 603 aa12.13□□□□□ -0.47
GPN3-201ENST00000228827 ZNF81P51508 661 aa12.13□□□□□ -0.47
GPN3-201ENST00000228827 ARHGDIAP52565 204 aa12.13□□□□□ -0.47
GPN3-201ENST00000228827 SCRN3Q0VDG4 424 aa12.13□□□□□ -0.47
GPN3-201ENST00000228827 PCGF3Q3KNV8 242 aa12.13□□□□□ -0.47
GPN3-201ENST00000228827 CXXC5Q7LFL8 322 aaKnown RBP12.13□□□□□ -0.47
GPN3-201ENST00000228827 ADCK1Q86TW2 530 aa12.13□□□□□ -0.47
GPN3-201ENST00000228827 ZDHHC21Q8IVQ6 265 aa12.13□□□□□ -0.47
GPN3-201ENST00000228827 GLB1L2Q8IW92 636 aa12.13□□□□□ -0.47
GPN3-201ENST00000228827 CLDND2Q8NHS1 167 aa12.13□□□□□ -0.47
GPN3-201ENST00000228827 SAMD8Q96LT4 415 aa12.13□□□□□ -0.47
GPN3-201ENST00000228827 OR52D1Q9H346 318 aa12.13□□□□□ -0.47
GPN3-201ENST00000228827 POFUT1Q9H488 388 aa12.13□□□□□ -0.47
GPN3-201ENST00000228827 ELOVL3Q9HB03 270 aa12.13□□□□□ -0.47
GPN3-201ENST00000228827 PLEK2Q9NYT0 353 aa12.13□□□□□ -0.47
GPN3-201ENST00000228827 TREM2Q9NZC2 230 aa12.13□□□□□ -0.47
GPN3-201ENST00000228827 NDRG4Q9ULP0 352 aaKnown RBP12.13□□□□□ -0.47
GPN3-201ENST00000228827 TMCC3Q9ULS5 477 aa12.13□□□□□ -0.47
GPN3-201ENST00000228827 GRIP1Q9Y3R0 1128 aa12.13□□□□□ -0.47
GPN3-201ENST00000228827 CUBNO60494 3623 aa12.12□□□□□ -0.47
GPN3-201ENST00000228827 ABCA1O95477 2261 aa12.12□□□□□ -0.47
GPN3-201ENST00000228827 PLSCR5A0PG75 271 aa12.12□□□□□ -0.47
GPN3-201ENST00000228827 TXNDC12O95881 172 aa12.12□□□□□ -0.47
GPN3-201ENST00000228827 IGHV1-46P01743 117 aa12.12□□□□□ -0.47
GPN3-201ENST00000228827 SRD5A1P18405 259 aa12.12□□□□□ -0.47
GPN3-201ENST00000228827 ATP6V1B2P21281 511 aa12.12□□□□□ -0.47
GPN3-201ENST00000228827 FPR3P25089 353 aa12.12□□□□□ -0.47
GPN3-201ENST00000228827 SLC6A6P31641 620 aa12.12□□□□□ -0.47
GPN3-201ENST00000228827 TMEM33P57088 247 aa12.12□□□□□ -0.47
GPN3-201ENST00000228827 MRPS11P82912 194 aaKnown RBP12.12□□□□□ -0.47
GPN3-201ENST00000228827 MVKQ03426 396 aa12.12□□□□□ -0.47
GPN3-201ENST00000228827 AQP6Q13520 282 aa12.12□□□□□ -0.47
GPN3-201ENST00000228827 MEP1BQ16820 701 aa12.12□□□□□ -0.47
GPN3-201ENST00000228827 CR1LQ2VPA4 569 aa12.12□□□□□ -0.47
GPN3-201ENST00000228827 RFX4Q33E94 735 aa12.12□□□□□ -0.47
GPN3-201ENST00000228827 AVPI1Q5T686 147 aa12.12□□□□□ -0.47
GPN3-201ENST00000228827 MBNL2Q5VZF2 373 aaKnown RBP12.12□□□□□ -0.47
GPN3-201ENST00000228827 C1orf94Q6P1W5 598 aa12.12□□□□□ -0.47
GPN3-201ENST00000228827 LEG1Q6P5S2 330 aa12.12□□□□□ -0.47
GPN3-201ENST00000228827 USP51Q70EK9 711 aa12.12□□□□□ -0.47
GPN3-201ENST00000228827 VASH1Q7L8A9 365 aaPredicted RBP12.12□□□□□ -0.47
GPN3-201ENST00000228827 JAZF1Q86VZ6 243 aa12.12□□□□□ -0.47
GPN3-201ENST00000228827 SLC7A6Q92536 515 aa12.12□□□□□ -0.47
GPN3-201ENST00000228827 IFT27Q9BW83 186 aa12.12□□□□□ -0.47
GPN3-201ENST00000228827 SAP30LQ9HAJ7 183 aa12.12□□□□□ -0.47
GPN3-201ENST00000228827 LPAR2Q9HBW0 351 aa12.12□□□□□ -0.47
GPN3-201ENST00000228827 IL1RAPQ9NPH3 570 aa12.12□□□□□ -0.47
GPN3-201ENST00000228827 ASH2LQ9UBL3 628 aa12.12□□□□□ -0.47
GPN3-201ENST00000228827 POLR1DQ9Y2S0 133 aa12.12□□□□□ -0.47
GPN3-201ENST00000228827 CACNG2Q9Y698 323 aa12.12□□□□□ -0.47
GPN3-201ENST00000228827 FBN1P35555 2871 aaKnown RBP12.12□□□□□ -0.47
GPN3-201ENST00000228827 SONP18583 2426 aaKnown RBP12.12□□□□□ -0.47
GPN3-201ENST00000228827 IGHV1-69-2A0A0G2JMI3 117 aa12.11□□□□□ -0.47
GPN3-201ENST00000228827 ZSCAN5BA6NJL1 495 aa12.11□□□□□ -0.47
GPN3-201ENST00000228827 RNF212BA8MTL3 300 aa12.11□□□□□ -0.47
GPN3-201ENST00000228827 DCTN6O00399 190 aa12.11□□□□□ -0.47
GPN3-201ENST00000228827 COX5BP10606 129 aa12.11□□□□□ -0.47
GPN3-201ENST00000228827 HNF1AP20823 631 aa12.11□□□□□ -0.47
GPN3-201ENST00000228827 IFNGR2P38484 337 aa12.11□□□□□ -0.47
GPN3-201ENST00000228827 MMP15P51511 669 aa12.11□□□□□ -0.47
GPN3-201ENST00000228827 MNAT1P51948 309 aa12.11□□□□□ -0.47
GPN3-201ENST00000228827 CDH15P55291 814 aa12.11□□□□□ -0.47
GPN3-201ENST00000228827 ARL9Q6T311 187 aa12.11□□□□□ -0.47
GPN3-201ENST00000228827 OR4K13Q8NH42 304 aa12.11□□□□□ -0.47
GPN3-201ENST00000228827 GNPDA2Q8TDQ7 276 aa12.11□□□□□ -0.47
GPN3-201ENST00000228827 NSL1Q96IY1 281 aa12.11□□□□□ -0.47
GPN3-201ENST00000228827 NMNAT3Q96T66 252 aa12.11□□□□□ -0.47
GPN3-201ENST00000228827 WACQ9BTA9 647 aa12.11□□□□□ -0.47
GPN3-201ENST00000228827 MSL2Q9HCI7 577 aa12.11□□□□□ -0.47
GPN3-201ENST00000228827 SRA1Q9HD15 236 aaKnown RBP12.11□□□□□ -0.47
GPN3-201ENST00000228827 NKIRAS2Q9NYR9 191 aa12.11□□□□□ -0.47
GPN3-201ENST00000228827 CHD3Q12873 2000 aaKnown RBP12.11□□□□□ -0.47
GPN3-201ENST00000228827 RER1O15258 196 aa12.1□□□□□ -0.47
GPN3-201ENST00000228827 TIMM8AO60220 97 aaPredicted RBP12.1□□□□□ -0.47
GPN3-201ENST00000228827 HIST1H1CP16403 213 aaKnown RBP12.1□□□□□ -0.47
GPN3-201ENST00000228827 NOS3P29474 1203 aa12.1□□□□□ -0.47
GPN3-201ENST00000228827 CRABP1P29762 137 aa12.1□□□□□ -0.47
GPN3-201ENST00000228827 CRYBB2P43320 205 aa12.1□□□□□ -0.47
GPN3-201ENST00000228827 TEKQ02763 1124 aa12.1□□□□□ -0.47
GPN3-201ENST00000228827 SPATS1Q496A3 300 aa12.1□□□□□ -0.47
GPN3-201ENST00000228827 CCDC92Q53HC0 331 aaPredicted RBP12.1□□□□□ -0.47
GPN3-201ENST00000228827 PGBD2Q6P3X8 592 aa12.1□□□□□ -0.47
GPN3-201ENST00000228827 DNM1P34Q6PK57 102 aa12.1□□□□□ -0.47
GPN3-201ENST00000228827 RINLQ6ZS11 566 aa12.1□□□□□ -0.47
GPN3-201ENST00000228827 C1orf174Q8IYL3 243 aa12.1□□□□□ -0.47
GPN3-201ENST00000228827 CCDC197Q8NCU1 140 aa12.1□□□□□ -0.47
GPN3-201ENST00000228827 SDR9C7Q8NEX9 313 aa12.1□□□□□ -0.47
GPN3-201ENST00000228827 OR9Q2Q8NGE9 314 aa12.1□□□□□ -0.47
GPN3-201ENST00000228827 C1orf159Q96HA4 380 aa12.1□□□□□ -0.47
GPN3-201ENST00000228827 RACGAP1Q9H0H5 632 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms