RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 ZNF823P16415 610 aa20.5■□□□□ 0.87
HOMER3-201ENST00000221222 GSTT1P30711 240 aa20.5■□□□□ 0.87
HOMER3-201ENST00000221222 SNRPGP62308 76 aaKnown RBP20.5■□□□□ 0.87
HOMER3-201ENST00000221222 HIST1H3AP68431 136 aa20.5■□□□□ 0.87
HOMER3-201ENST00000221222 ADAM8P78325 824 aa20.5■□□□□ 0.87
HOMER3-201ENST00000221222 NAAAQ02083 359 aa20.5■□□□□ 0.87
HOMER3-201ENST00000221222 SLC25A30Q5SVS4 291 aa20.5■□□□□ 0.87
HOMER3-201ENST00000221222 HIST2H3PS2Q5TEC6 136 aa20.5■□□□□ 0.87
HOMER3-201ENST00000221222 HIST2H3AQ71DI3 136 aa20.5■□□□□ 0.87
HOMER3-201ENST00000221222 GID4Q8IVV7 300 aa20.5■□□□□ 0.87
HOMER3-201ENST00000221222 RADILQ96JH8 1075 aa20.5■□□□□ 0.87
HOMER3-201ENST00000221222 TEAD3Q99594 435 aa20.5■□□□□ 0.87
HOMER3-201ENST00000221222 WNT5BQ9H1J7 359 aa20.5■□□□□ 0.87
HOMER3-201ENST00000221222 VCX3BQ9H321 246 aa20.5■□□□□ 0.87
HOMER3-201ENST00000221222 C1orf198Q9H425 327 aa20.5■□□□□ 0.87
HOMER3-201ENST00000221222 WDR76Q9H967 626 aa20.5■□□□□ 0.87
HOMER3-201ENST00000221222 IQCMA0A1B0GVH7 501 aa20.49■□□□□ 0.87
HOMER3-201ENST00000221222 CCDC182A6NF36 153 aa20.49■□□□□ 0.87
HOMER3-201ENST00000221222 ENTPD1P49961 510 aa20.49■□□□□ 0.87
HOMER3-201ENST00000221222 ADARB1P78563 741 aaKnown RBP20.49■□□□□ 0.87
HOMER3-201ENST00000221222 PLP2Q04941 152 aa20.49■□□□□ 0.87
HOMER3-201ENST00000221222 TTC23Q5W5X9 447 aa20.49■□□□□ 0.87
HOMER3-201ENST00000221222 SLC18B1Q6NT16 456 aa20.49■□□□□ 0.87
HOMER3-201ENST00000221222 MEPCEQ7L2J0 689 aaKnown RBP20.49■□□□□ 0.87
HOMER3-201ENST00000221222 BCDIN3DQ7Z5W3 292 aaKnown RBP20.49■□□□□ 0.87
HOMER3-201ENST00000221222 TIGD4Q8IY51 512 aa20.49■□□□□ 0.87
HOMER3-201ENST00000221222 ALDH16A1Q8IZ83 802 aa20.49■□□□□ 0.87
HOMER3-201ENST00000221222 DHRSXQ8N5I4 330 aa20.49■□□□□ 0.87
HOMER3-201ENST00000221222 CPEB3Q8NE35 698 aaKnown RBP20.49■□□□□ 0.87
HOMER3-201ENST00000221222 GJC3Q8NFK1 279 aa20.49■□□□□ 0.87
HOMER3-201ENST00000221222 UBE2FQ969M7 185 aa20.49■□□□□ 0.87
HOMER3-201ENST00000221222 ZMYND19Q96E35 227 aaPredicted RBP20.49■□□□□ 0.87
HOMER3-201ENST00000221222 CDADC1Q9BWV3 514 aa20.49■□□□□ 0.87
HOMER3-201ENST00000221222 CLEC4MQ9H2X3 399 aaPredicted RBP20.49■□□□□ 0.87
HOMER3-201ENST00000221222 H2AFY2Q9P0M6 372 aaPredicted RBP20.49■□□□□ 0.87
HOMER3-201ENST00000221222 ANKRD17O75179 2603 aaKnown RBP20.49■□□□□ 0.87
HOMER3-201ENST00000221222 A0A1W2PPR1 153 aa20.48■□□□□ 0.87
HOMER3-201ENST00000221222 SLC22A31A6NKX4 558 aa20.48■□□□□ 0.87
HOMER3-201ENST00000221222 RPS7P62081 194 aaKnown RBP20.48■□□□□ 0.87
HOMER3-201ENST00000221222 SPOCK1Q08629 439 aa20.48■□□□□ 0.87
HOMER3-201ENST00000221222 LCN1P1Q5VSP4 162 aa20.48■□□□□ 0.87
HOMER3-201ENST00000221222 FBXW10Q5XX13 1052 aa20.48■□□□□ 0.87
HOMER3-201ENST00000221222 ZNF774Q6NX45 483 aa20.48■□□□□ 0.87
HOMER3-201ENST00000221222 AKR7LQ8NHP1 331 aa20.48■□□□□ 0.87
HOMER3-201ENST00000221222 INTS14Q96SY0 518 aa20.48■□□□□ 0.87
HOMER3-201ENST00000221222 ADI1Q9BV57 179 aa20.48■□□□□ 0.87
HOMER3-201ENST00000221222 AKAP9Q99996 3911 aa20.48■□□□□ 0.87
HOMER3-201ENST00000221222 H0YAE9 185 aa20.47■□□□□ 0.87
HOMER3-201ENST00000221222 SGCEO43556 437 aa20.47■□□□□ 0.87
HOMER3-201ENST00000221222 MPZL2O60487 215 aa20.47■□□□□ 0.87
HOMER3-201ENST00000221222 CRYAAP02489 173 aa20.47■□□□□ 0.87
HOMER3-201ENST00000221222 COX5BP10606 129 aa20.47■□□□□ 0.87
HOMER3-201ENST00000221222 GABRB1P18505 474 aa20.47■□□□□ 0.87
HOMER3-201ENST00000221222 GGTLC2Q14390 218 aa20.47■□□□□ 0.87
HOMER3-201ENST00000221222 CORO6Q6QEF8 472 aa20.47■□□□□ 0.87
HOMER3-201ENST00000221222 ZNF704Q6ZNC4 412 aaPredicted RBP20.47■□□□□ 0.87
HOMER3-201ENST00000221222 VASH1Q7L8A9 365 aaPredicted RBP20.47■□□□□ 0.87
HOMER3-201ENST00000221222 TMEM200AQ86VY9 491 aa20.47■□□□□ 0.87
HOMER3-201ENST00000221222 LINC00346Q8IVM7 164 aa20.47■□□□□ 0.87
HOMER3-201ENST00000221222 ENTHD1Q8IYW4 607 aa20.47■□□□□ 0.87
HOMER3-201ENST00000221222 SLC30A7Q8NEW0 376 aa20.47■□□□□ 0.87
HOMER3-201ENST00000221222 OR2AJ1Q8NGZ0 328 aa20.47■□□□□ 0.87
HOMER3-201ENST00000221222 CYGBQ8WWM9 190 aa20.47■□□□□ 0.87
HOMER3-201ENST00000221222 ZNF582Q96NG8 517 aaPredicted RBP20.47■□□□□ 0.87
HOMER3-201ENST00000221222 APOL4Q9BPW4 351 aa20.47■□□□□ 0.87
HOMER3-201ENST00000221222 ATPIF1Q9UII2 106 aa20.47■□□□□ 0.87
HOMER3-201ENST00000221222 PLCE1Q9P212 2302 aa20.47■□□□□ 0.87
HOMER3-201ENST00000221222 IGHV2OR16-5A0A0B4J2B6 119 aa20.46■□□□□ 0.87
HOMER3-201ENST00000221222 SHISA9B4DS77 424 aa20.46■□□□□ 0.87
HOMER3-201ENST00000221222 ZNF593O00488 134 aaPredicted RBP20.46■□□□□ 0.87
HOMER3-201ENST00000221222 RER1O15258 196 aa20.46■□□□□ 0.87
HOMER3-201ENST00000221222 DOK2O60496 412 aa20.46■□□□□ 0.87
HOMER3-201ENST00000221222 TMCC2O75069 709 aa20.46■□□□□ 0.87
HOMER3-201ENST00000221222 PLAUP00749 431 aa20.46■□□□□ 0.87
HOMER3-201ENST00000221222 PSKH1P11801 424 aa20.46■□□□□ 0.87
HOMER3-201ENST00000221222 ZNF35P13682 527 aa20.46■□□□□ 0.87
HOMER3-201ENST00000221222 STOMP27105 288 aa20.46■□□□□ 0.87
HOMER3-201ENST00000221222 APEX1P27695 318 aaKnown RBP20.46■□□□□ 0.87
HOMER3-201ENST00000221222 CALCRP30988 508 aa20.46■□□□□ 0.87
HOMER3-201ENST00000221222 OCLNQ16625 522 aa20.46■□□□□ 0.87
HOMER3-201ENST00000221222 CCDC92Q53HC0 331 aaPredicted RBP20.46■□□□□ 0.87
HOMER3-201ENST00000221222 MEDAGQ5VYS4 303 aa20.46■□□□□ 0.87
HOMER3-201ENST00000221222 ADAM5Q6NVV9 412 aa20.46■□□□□ 0.87
HOMER3-201ENST00000221222 B3GLCTQ6Y288 498 aa20.46■□□□□ 0.87
HOMER3-201ENST00000221222 ERI1Q8IV48 349 aaKnown RBP20.46■□□□□ 0.87
HOMER3-201ENST00000221222 PIAS4Q8N2W9 510 aaPredicted RBP20.46■□□□□ 0.87
HOMER3-201ENST00000221222 RHOXF1Q8NHV9 184 aa20.46■□□□□ 0.87
HOMER3-201ENST00000221222 KCNS3Q9BQ31 491 aa20.46■□□□□ 0.87
HOMER3-201ENST00000221222 HAO2Q9NYQ3 351 aa20.46■□□□□ 0.87
HOMER3-201ENST00000221222 GDF2Q9UK05 429 aaPredicted RBP20.46■□□□□ 0.87
HOMER3-201ENST00000221222 ROS1P08922 2347 aa20.46■□□□□ 0.87
HOMER3-201ENST00000221222 RAI1Q7Z5J4 1906 aaPredicted RBP20.46■□□□□ 0.87
HOMER3-201ENST00000221222 SYNGR3O43761 229 aa20.46■□□□□ 0.87
HOMER3-201ENST00000221222 SPARCP09486 303 aa20.46■□□□□ 0.87
HOMER3-201ENST00000221222 HTR1FP30939 366 aa20.46■□□□□ 0.87
HOMER3-201ENST00000221222 CAPGP40121 348 aa20.46■□□□□ 0.87
HOMER3-201ENST00000221222 RPS27P42677 84 aaKnown RBP20.46■□□□□ 0.87
HOMER3-201ENST00000221222 AQP4P55087 323 aa20.46■□□□□ 0.87
HOMER3-201ENST00000221222 CDH11P55287 796 aa20.46■□□□□ 0.87
HOMER3-201ENST00000221222 TMED1Q13445 227 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms