RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 DPPA2Q7Z7J5 298 aa23.75■■□□□ 1.39
CHMP4B-201ENST00000217402 CDC20BQ86Y33 519 aa23.75■■□□□ 1.39
CHMP4B-201ENST00000217402 OR10H4Q8NGA5 316 aa23.75■■□□□ 1.39
CHMP4B-201ENST00000217402 OR2H1Q9GZK4 316 aa23.75■■□□□ 1.39
CHMP4B-201ENST00000217402 KLHDC2Q9Y2U9 406 aa23.75■■□□□ 1.39
CHMP4B-201ENST00000217402 ARR3P36575 388 aa23.74■■□□□ 1.39
CHMP4B-201ENST00000217402 PSG4Q00888 419 aa23.74■■□□□ 1.39
CHMP4B-201ENST00000217402 PABPC1L2AQ5JQF8 200 aa23.74■■□□□ 1.39
CHMP4B-201ENST00000217402 ZNF774Q6NX45 483 aa23.74■■□□□ 1.39
CHMP4B-201ENST00000217402 SYT9Q86SS6 491 aa23.74■■□□□ 1.39
CHMP4B-201ENST00000217402 RFLNBQ8N5W9 214 aa23.74■■□□□ 1.39
CHMP4B-201ENST00000217402 OTOSQ8NHW6 89 aa23.74■■□□□ 1.39
CHMP4B-201ENST00000217402 MAP6Q96JE9 813 aa23.74■■□□□ 1.39
CHMP4B-201ENST00000217402 TTTY10Q9BZA0 68 aa23.74■■□□□ 1.39
CHMP4B-201ENST00000217402 YIPF3Q9GZM5 350 aa23.74■■□□□ 1.39
CHMP4B-201ENST00000217402 WNT5BQ9H1J7 359 aa23.74■■□□□ 1.39
CHMP4B-201ENST00000217402 LAMP5Q9UJQ1 280 aa23.74■■□□□ 1.39
CHMP4B-201ENST00000217402 ZNF83P51522 516 aa23.73■■□□□ 1.39
CHMP4B-201ENST00000217402 RAB40BQ12829 278 aa23.73■■□□□ 1.39
CHMP4B-201ENST00000217402 SPATC1Q76KD6 591 aa23.73■■□□□ 1.39
CHMP4B-201ENST00000217402 GJC3Q8NFK1 279 aa23.73■■□□□ 1.39
CHMP4B-201ENST00000217402 THEM6Q8WUY1 208 aa23.73■■□□□ 1.39
CHMP4B-201ENST00000217402 AMELYQ99218 206 aa23.73■■□□□ 1.39
CHMP4B-201ENST00000217402 PLEK2Q9NYT0 353 aa23.73■■□□□ 1.39
CHMP4B-201ENST00000217402 NPAP1Q9NZP6 1156 aa23.73■■□□□ 1.39
CHMP4B-201ENST00000217402 COPS3Q9UNS2 423 aa23.73■■□□□ 1.39
CHMP4B-201ENST00000217402 SGCEO43556 437 aa23.73■■□□□ 1.39
CHMP4B-201ENST00000217402 DOK2O60496 412 aa23.73■■□□□ 1.39
CHMP4B-201ENST00000217402 CLDN1O95832 211 aa23.73■■□□□ 1.39
CHMP4B-201ENST00000217402 CELA3BP08861 270 aa23.73■■□□□ 1.39
CHMP4B-201ENST00000217402 SLC15A1P46059 708 aa23.73■■□□□ 1.39
CHMP4B-201ENST00000217402 IDH3GP51553 393 aaPredicted RBP23.73■■□□□ 1.39
CHMP4B-201ENST00000217402 RAB39AQ14964 217 aa23.73■■□□□ 1.39
CHMP4B-201ENST00000217402 KLHL22Q53GT1 634 aa23.73■■□□□ 1.39
CHMP4B-201ENST00000217402 AHSA2Q719I0 299 aa23.73■■□□□ 1.39
CHMP4B-201ENST00000217402 OR52I1Q8NGK6 324 aa23.73■■□□□ 1.39
CHMP4B-201ENST00000217402 GGHQ92820 318 aa23.73■■□□□ 1.39
CHMP4B-201ENST00000217402 MS4A3Q96HJ5 214 aa23.73■■□□□ 1.39
CHMP4B-201ENST00000217402 WACQ9BTA9 647 aa23.73■■□□□ 1.39
CHMP4B-201ENST00000217402 ABHD6Q9BV23 337 aa23.73■■□□□ 1.39
CHMP4B-201ENST00000217402 C1orf198Q9H425 327 aa23.73■■□□□ 1.39
CHMP4B-201ENST00000217402 PLCXD1Q9NUJ7 323 aa23.73■■□□□ 1.39
CHMP4B-201ENST00000217402 EXOGQ9Y2C4 368 aaKnown RBP23.73■■□□□ 1.39
CHMP4B-201ENST00000217402 MYRFQ9Y2G1 1151 aa23.73■■□□□ 1.39
CHMP4B-201ENST00000217402 CBR1P16152 277 aa23.72■■□□□ 1.39
CHMP4B-201ENST00000217402 CXCR4P61073 352 aa23.72■■□□□ 1.39
CHMP4B-201ENST00000217402 CCDC92Q53HC0 331 aaPredicted RBP23.72■■□□□ 1.39
CHMP4B-201ENST00000217402 SEZ6L2Q6UXD5 910 aa23.72■■□□□ 1.39
CHMP4B-201ENST00000217402 ZNF454Q8N9F8 522 aa23.72■■□□□ 1.39
CHMP4B-201ENST00000217402 ZNF540Q8NDQ6 660 aa23.72■■□□□ 1.39
CHMP4B-201ENST00000217402 ST7LQ8TDW4 575 aa23.72■■□□□ 1.39
CHMP4B-201ENST00000217402 PSORS1C1Q9UIG5 152 aa23.72■■□□□ 1.39
CHMP4B-201ENST00000217402 FADS2O95864 444 aaKnown RBP23.71■■□□□ 1.39
CHMP4B-201ENST00000217402 LYNP07948 512 aa23.71■■□□□ 1.39
CHMP4B-201ENST00000217402 ALOX5APP20292 161 aa23.71■■□□□ 1.39
CHMP4B-201ENST00000217402 KIR2DL3P43628 341 aa23.71■■□□□ 1.39
CHMP4B-201ENST00000217402 HIST1H3AP68431 136 aa23.71■■□□□ 1.39
CHMP4B-201ENST00000217402 HIST2H3PS2Q5TEC6 136 aa23.71■■□□□ 1.39
CHMP4B-201ENST00000217402 HIST2H3AQ71DI3 136 aa23.71■■□□□ 1.39
CHMP4B-201ENST00000217402 VASH1Q7L8A9 365 aaPredicted RBP23.71■■□□□ 1.39
CHMP4B-201ENST00000217402 MYPOPQ86VE0 399 aaPredicted RBP23.71■■□□□ 1.39
CHMP4B-201ENST00000217402 MRPS18AQ9NVS2 196 aaKnown RBP23.71■■□□□ 1.39
CHMP4B-201ENST00000217402 SCN3BQ9NY72 215 aa23.71■■□□□ 1.39
CHMP4B-201ENST00000217402 CRIM1Q9NZV1 1036 aa23.71■■□□□ 1.39
CHMP4B-201ENST00000217402 GCN1Q92616 2671 aaKnown RBP23.71■■□□□ 1.39
CHMP4B-201ENST00000217402 PTGES3LE9PB15 166 aa23.7■■□□□ 1.39
CHMP4B-201ENST00000217402 J3QRE1 110 aa23.7■■□□□ 1.39
CHMP4B-201ENST00000217402 M0R1B8 84 aa23.7■■□□□ 1.39
CHMP4B-201ENST00000217402 IGFBP2P18065 325 aa23.7■■□□□ 1.39
CHMP4B-201ENST00000217402 CSNK2BP67870 215 aa23.7■■□□□ 1.39
CHMP4B-201ENST00000217402 PLP2Q04941 152 aa23.7■■□□□ 1.39
CHMP4B-201ENST00000217402 RAB35Q15286 201 aa23.7■■□□□ 1.39
CHMP4B-201ENST00000217402 ZNF584Q8IVC4 421 aa23.7■■□□□ 1.39
CHMP4B-201ENST00000217402 CPEB3Q8NE35 698 aaKnown RBP23.7■■□□□ 1.39
CHMP4B-201ENST00000217402 OR10S1Q8NGN2 331 aa23.7■■□□□ 1.39
CHMP4B-201ENST00000217402 SLAMF6Q96DU3 332 aa23.7■■□□□ 1.39
CHMP4B-201ENST00000217402 ZNF75AQ96N20 296 aa23.7■■□□□ 1.39
CHMP4B-201ENST00000217402 TMEM14AQ9Y6G1 99 aa23.7■■□□□ 1.39
CHMP4B-201ENST00000217402 COL12A1Q99715 3063 aa23.7■■□□□ 1.38
CHMP4B-201ENST00000217402 PRR14LQ5THK1 2151 aa23.7■■□□□ 1.38
CHMP4B-201ENST00000217402 A0A1W2PQL4 384 aaPredicted RBP23.7■■□□□ 1.38
CHMP4B-201ENST00000217402 EFCAB10A6NFE3 127 aa23.7■■□□□ 1.38
CHMP4B-201ENST00000217402 ZNF670-ZNF695F2Z2N8 137 aa23.7■■□□□ 1.38
CHMP4B-201ENST00000217402 IGKV3-15P01624 115 aa23.7■■□□□ 1.38
CHMP4B-201ENST00000217402 OR2T7P0C7T2 308 aa23.7■■□□□ 1.38
CHMP4B-201ENST00000217402 APEX1P27695 318 aaKnown RBP23.7■■□□□ 1.38
CHMP4B-201ENST00000217402 PEX19P40855 299 aa23.7■■□□□ 1.38
CHMP4B-201ENST00000217402 ELFN2Q5R3F8 820 aa23.7■■□□□ 1.38
CHMP4B-201ENST00000217402 MEX3BQ6ZN04 569 aaKnown RBP23.7■■□□□ 1.38
CHMP4B-201ENST00000217402 DMRTC2Q8IXT2 367 aaPredicted RBP23.7■■□□□ 1.38
CHMP4B-201ENST00000217402 ALDH16A1Q8IZ83 802 aa23.7■■□□□ 1.38
CHMP4B-201ENST00000217402 OR2T27Q8NH04 317 aa23.7■■□□□ 1.38
CHMP4B-201ENST00000217402 PNRC2Q9NPJ4 139 aaKnown RBP23.7■■□□□ 1.38
CHMP4B-201ENST00000217402 CENPMQ9NSP4 180 aa23.7■■□□□ 1.38
CHMP4B-201ENST00000217402 LRCH1Q9Y2L9 728 aa23.7■■□□□ 1.38
CHMP4B-201ENST00000217402 PCDHGB1Q9Y5G3 927 aa23.7■■□□□ 1.38
CHMP4B-201ENST00000217402 ANKHD1Q8IWZ3 2542 aaKnown RBP23.69■■□□□ 1.38
CHMP4B-201ENST00000217402 IQCMA0A1B0GVH7 501 aa23.69■■□□□ 1.38
CHMP4B-201ENST00000217402 CCDC159P0C7I6 412 aa23.69■■□□□ 1.38
CHMP4B-201ENST00000217402 ZNF14P17017 642 aaPredicted RBP23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms