RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 KLK2P20151 261 aa13.55□□□□□ -0.24
EFNB1-201ENST00000204961 GALP22466 123 aa13.55□□□□□ -0.24
EFNB1-201ENST00000204961 ABCD3P28288 659 aa13.55□□□□□ -0.24
EFNB1-201ENST00000204961 S100A11P31949 105 aa13.55□□□□□ -0.24
EFNB1-201ENST00000204961 RIDAP52758 137 aaKnown RBP13.55□□□□□ -0.24
EFNB1-201ENST00000204961 TOMM20Q15388 145 aa13.55□□□□□ -0.24
EFNB1-201ENST00000204961 ZNF454Q8N9F8 522 aa13.55□□□□□ -0.24
EFNB1-201ENST00000204961 STEAP2Q8NFT2 490 aa13.55□□□□□ -0.24
EFNB1-201ENST00000204961 OR2I1PQ8NGU4 316 aa13.55□□□□□ -0.24
EFNB1-201ENST00000204961 ROBO4Q8WZ75 1007 aa13.55□□□□□ -0.24
EFNB1-201ENST00000204961 CPNE2Q96FN4 548 aaPredicted RBP13.55□□□□□ -0.24
EFNB1-201ENST00000204961 JAM3Q9BX67 310 aa13.55□□□□□ -0.24
EFNB1-201ENST00000204961 NMNAT2Q9BZQ4 307 aa13.55□□□□□ -0.24
EFNB1-201ENST00000204961 PARP12Q9H0J9 701 aaKnown RBP13.55□□□□□ -0.24
EFNB1-201ENST00000204961 GPR160Q9UJ42 338 aa13.55□□□□□ -0.24
EFNB1-201ENST00000204961 PLCL2Q9UPR0 1127 aa13.55□□□□□ -0.24
EFNB1-201ENST00000204961 HRH3Q9Y5N1 445 aa13.55□□□□□ -0.24
EFNB1-201ENST00000204961 KCNMB2Q9Y691 235 aa13.55□□□□□ -0.24
EFNB1-201ENST00000204961 AHSA1O95433 338 aa13.55□□□□□ -0.24
EFNB1-201ENST00000204961 CD2P06729 351 aa13.55□□□□□ -0.24
EFNB1-201ENST00000204961 HTR2CP28335 458 aa13.55□□□□□ -0.24
EFNB1-201ENST00000204961 SLC17A1Q14916 467 aa13.55□□□□□ -0.24
EFNB1-201ENST00000204961 CDC20BQ86Y33 519 aa13.55□□□□□ -0.24
EFNB1-201ENST00000204961 ADGRG3Q86Y34 549 aa13.55□□□□□ -0.24
EFNB1-201ENST00000204961 OR4D6Q8NGJ1 314 aa13.55□□□□□ -0.24
EFNB1-201ENST00000204961 OR1L3Q8NH93 324 aa13.55□□□□□ -0.24
EFNB1-201ENST00000204961 OTOSQ8NHW6 89 aa13.55□□□□□ -0.24
EFNB1-201ENST00000204961 COPS7AQ9UBW8 275 aa13.55□□□□□ -0.24
EFNB1-201ENST00000204961 LOC400499M0QZD8 3231 aa13.55□□□□□ -0.24
EFNB1-201ENST00000204961 LOC107986453A0A1B0GWG9 222 aa13.54□□□□□ -0.24
EFNB1-201ENST00000204961 SLC22A23A1A5C7 686 aa13.54□□□□□ -0.24
EFNB1-201ENST00000204961 NSA2O95478 260 aaKnown RBP13.54□□□□□ -0.24
EFNB1-201ENST00000204961 PNMTP11086 282 aa13.54□□□□□ -0.24
EFNB1-201ENST00000204961 ABOP16442 354 aa13.54□□□□□ -0.24
EFNB1-201ENST00000204961 CAPZBP47756 277 aa13.54□□□□□ -0.24
EFNB1-201ENST00000204961 YPEL5P62699 121 aa13.54□□□□□ -0.24
EFNB1-201ENST00000204961 RBMS2Q15434 407 aaKnown RBP13.54□□□□□ -0.24
EFNB1-201ENST00000204961 NR0B2Q15466 257 aa13.54□□□□□ -0.24
EFNB1-201ENST00000204961 TMEM88Q6PEY1 159 aa13.54□□□□□ -0.24
EFNB1-201ENST00000204961 TMEM200AQ86VY9 491 aa13.54□□□□□ -0.24
EFNB1-201ENST00000204961 GABRG1Q8N1C3 465 aa13.54□□□□□ -0.24
EFNB1-201ENST00000204961 ZNF248Q8NDW4 579 aa13.54□□□□□ -0.24
EFNB1-201ENST00000204961 MRPL38Q96DV4 380 aaKnown RBP13.54□□□□□ -0.24
EFNB1-201ENST00000204961 TMEM41AQ96HV5 264 aa13.54□□□□□ -0.24
EFNB1-201ENST00000204961 SLC41A2Q96JW4 573 aa13.54□□□□□ -0.24
EFNB1-201ENST00000204961 GPER1Q99527 375 aa13.54□□□□□ -0.24
EFNB1-201ENST00000204961 KLRF1Q9NZS2 232 aa13.54□□□□□ -0.24
EFNB1-201ENST00000204961 LHX6Q9UPM6 363 aa13.54□□□□□ -0.24
EFNB1-201ENST00000204961 CACNA1DQ01668 2161 aa13.54□□□□□ -0.24
EFNB1-201ENST00000204961 NPIPA5E9PKD4 350 aa13.54□□□□□ -0.24
EFNB1-201ENST00000204961 SDCBPO00560 298 aaPredicted RBP13.54□□□□□ -0.24
EFNB1-201ENST00000204961 F10P00742 488 aa13.54□□□□□ -0.24
EFNB1-201ENST00000204961 F12P00748 615 aaPredicted RBP13.54□□□□□ -0.24
EFNB1-201ENST00000204961 ASAH2BP0C7U1 165 aa13.54□□□□□ -0.24
EFNB1-201ENST00000204961 MAPK3P27361 379 aaPredicted RBP13.54□□□□□ -0.24
EFNB1-201ENST00000204961 FAUP35544 74 aaKnown RBP13.54□□□□□ -0.24
EFNB1-201ENST00000204961 CAPZA1P52907 286 aa13.54□□□□□ -0.24
EFNB1-201ENST00000204961 PSMD4P55036 377 aaKnown RBP13.54□□□□□ -0.24
EFNB1-201ENST00000204961 CCINQ13939 588 aa13.54□□□□□ -0.24
EFNB1-201ENST00000204961 SLC18B1Q6NT16 456 aa13.54□□□□□ -0.24
EFNB1-201ENST00000204961 GSG1LQ6UXU4 331 aa13.54□□□□□ -0.24
EFNB1-201ENST00000204961 AKIRIN1Q9H9L7 192 aaPredicted RBP13.54□□□□□ -0.24
EFNB1-201ENST00000204961 MRTO4Q9UKD2 239 aaKnown RBP13.54□□□□□ -0.24
EFNB1-201ENST00000204961 NPIPA1Q9UND3 350 aa13.54□□□□□ -0.24
EFNB1-201ENST00000204961 A0A1B0GUH1 482 aa13.54□□□□□ -0.24
EFNB1-201ENST00000204961 TMEM82A0PJX8 343 aa13.54□□□□□ -0.24
EFNB1-201ENST00000204961 PRSS37A4D1T9 235 aa13.54□□□□□ -0.24
EFNB1-201ENST00000204961 AGPAT2O15120 278 aa13.54□□□□□ -0.24
EFNB1-201ENST00000204961 DRD1P21728 446 aa13.54□□□□□ -0.24
EFNB1-201ENST00000204961 ANOS1P23352 680 aa13.54□□□□□ -0.24
EFNB1-201ENST00000204961 FUT7Q11130 342 aa13.54□□□□□ -0.24
EFNB1-201ENST00000204961 SLC9A3R2Q15599 337 aa13.54□□□□□ -0.24
EFNB1-201ENST00000204961 C1orf140Q5VVS0 124 aa13.54□□□□□ -0.24
EFNB1-201ENST00000204961 TMEM225Q6GV28 225 aa13.54□□□□□ -0.24
EFNB1-201ENST00000204961 ASPHD2Q6ICH7 369 aa13.54□□□□□ -0.24
EFNB1-201ENST00000204961 UNQ9370/PRO34162Q6UXP9 181 aa13.54□□□□□ -0.24
EFNB1-201ENST00000204961 MAMDC2Q7Z304 686 aaPredicted RBP13.54□□□□□ -0.24
EFNB1-201ENST00000204961 ASB12Q8WXK4 309 aa13.54□□□□□ -0.24
EFNB1-201ENST00000204961 GSKIPQ9P0R6 139 aa13.54□□□□□ -0.24
EFNB1-201ENST00000204961 OPN4Q9UHM6 478 aa13.54□□□□□ -0.24
EFNB1-201ENST00000204961 MMP17Q9ULZ9 603 aa13.54□□□□□ -0.24
EFNB1-201ENST00000204961 NCOA6Q14686 2063 aaPredicted RBP13.53□□□□□ -0.24
EFNB1-201ENST00000204961 A0A1B0GV50 99 aa13.53□□□□□ -0.24
EFNB1-201ENST00000204961 H2BFMP0C1H6 154 aa13.53□□□□□ -0.24
EFNB1-201ENST00000204961 AKAIN1P0CW23 69 aa13.53□□□□□ -0.24
EFNB1-201ENST00000204961 BLKP51451 505 aa13.53□□□□□ -0.24
EFNB1-201ENST00000204961 DLX5P56178 289 aa13.53□□□□□ -0.24
EFNB1-201ENST00000204961 ZNF626Q68DY1 528 aa13.53□□□□□ -0.24
EFNB1-201ENST00000204961 SLC29A4Q7RTT9 530 aa13.53□□□□□ -0.24
EFNB1-201ENST00000204961 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.53□□□□□ -0.24
EFNB1-201ENST00000204961 TCTN2Q96GX1 697 aa13.53□□□□□ -0.24
EFNB1-201ENST00000204961 ZNF736B4DX44 427 aaPredicted RBP13.53□□□□□ -0.24
EFNB1-201ENST00000204961 H7C417 338 aa13.53□□□□□ -0.24
EFNB1-201ENST00000204961 XRCC3O43542 346 aa13.53□□□□□ -0.24
EFNB1-201ENST00000204961 MPIG6BO95866 241 aa13.53□□□□□ -0.24
EFNB1-201ENST00000204961 ABHD16AO95870 558 aa13.53□□□□□ -0.24
EFNB1-201ENST00000204961 RAB40ALP0C0E4 278 aa13.53□□□□□ -0.24
EFNB1-201ENST00000204961 CAPZA2P47755 286 aa13.53□□□□□ -0.24
EFNB1-201ENST00000204961 BIDP55957 195 aa13.53□□□□□ -0.24
EFNB1-201ENST00000204961 TLE3Q04726 772 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms